Pelo008566.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- grn
- Assembly
- GCA_014825605.1
- Location
- QVNY01022733.1:1-3730[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-15 2.9e-11 44.2 2.2 1 33 480 511 480 513 0.94 2 2 5e-17 1.9e-13 51.2 8.3 1 33 543 574 543 575 0.98
Sequence Information
- Coding Sequence
- ATGGAAGAGAGAATAATCAAACAGGAGATCAAGATAGAATGGGACAATCATCACGCGAGTGAGAATTCGCCGCAGGTAACCGGTACGGAAGATCAGACAGCCGGGAGTCCTCAGAGTGTTATCACGACTAGAAGACACGTAAGAACGATCACCACCGCCGGTCACATTACCGAGGGAATCGCCGAGGTCGATCCGGAGTCGCCGGATTCCAACTCCGTCACCGGGAATCTTCATCAGGGACTTCATCAACAGAGAAACGAACAACACGAACAAGCTCCGCAACAAACACAACAGCATTACGTGCAGATTTCTCATCCGGGCGCCGAGGATCAGCAACAATCGGCGGATCAGCGAGTCGTTTACGCCACCAGCAATGGGCAAGAGGTTCAGGTCGAGGTGACGGAAACCTCGGAGGCTATCACACTTACGGTCAAGGAACCGCCCAGATACGAGGCACCTGCGCCAGATAGAACAGAAGTAGATAACCGCATGTACGGTTATCCGGAGAGACACGAAGTCCGCAGGGAAAATCATGTTATCGCCGTGGCCGACCGTCGACGAACCAGTCATCAGAGGTTCAGTCCTCACGAGCATCATCAGTCAACGGGAACGAACGCAAATGCAAGATATCAGGGATCGCCAGTGCTTCCCGCCACGGAGGAATACGACGCGTCGACGATCGTCACCCAAACCGGATCAACGGTCCATCTCAGTTCACCGACGCAACCGTATTCGCCGTCGCCGATCGAGGGAATTCGCACCGCGAGTCAGCAGCAACAGCTTGTGGCAACGAGCTACGCCGACACCGGCAGCATCGTCAAGTACGACACCGAGGCCGCCGCGGCCGCGGAAACTATCAAAGCTCCTAACACGTACGCCAATTTGGTGACGGTCACTAATCCGCCCGCGCAAACTATCGAATACACGCAATATTTGTCGAACAATGAAACCTCCTTCCAACCGGCCTCGACGTACAGTTACCACAAGCCGGGAGACCCTGTCATCTTCTATCCATCGGCGACGCAGATCGGATCGAGATCTTCCGAGGTGGAATCACCCGGTAGCACATACATGAAGAGTGATCCCACGTTATCTTCATCCCTAACTGCCACTCGCGCGGTGCCGCTGTACGAACAACCTGGTTCACCGGGTACTCAATCCGGATTGACTTTGTACAACACGGGATCGTACCAATACGTGAAACCACCAGGTGACGTTTATTCGTGGCCAGCCAATAGCACGCCCTCGCCCCCAACGGATTACGTCCAGCAATATCAGAATAGCGTGATCTCCGTCACTGACGCCAATATGCAACTTTATTCGGGATACAGCATTTCGTCGAGCGCGAACGGGCCACCCTCTGCGTGGACTACCATCCCGCTTACCGGTCCCGACGACGCGTTCGAAGGACCTGTCATGGCTGCAGAACCGAAAGAGTGTGCCAATTGCGCAGCATCAATGACGCCGTTGTGGAGACGCGACGGATCTGGTCACTATCTGTGCAACGCCTGCGGGATTCATGGCAGAATTAACGGCATGAGCAGACTGGGACCCATGAGGTGTCCCAAGCCGAAGCAGTCGGTCACGCCGGTAAACATTACCGGCGTGCGACGGACGGGGGTTCAATGTGCAAATTGCAGGACCAGCACAACAACGCTCTGGCGTCGGAACAACAACGGTGAGCCAGTTTGTAACGCATGCGGACTTTACTATAAGTTGCATAAC
- Protein Sequence
- MEERIIKQEIKIEWDNHHASENSPQVTGTEDQTAGSPQSVITTRRHVRTITTAGHITEGIAEVDPESPDSNSVTGNLHQGLHQQRNEQHEQAPQQTQQHYVQISHPGAEDQQQSADQRVVYATSNGQEVQVEVTETSEAITLTVKEPPRYEAPAPDRTEVDNRMYGYPERHEVRRENHVIAVADRRRTSHQRFSPHEHHQSTGTNANARYQGSPVLPATEEYDASTIVTQTGSTVHLSSPTQPYSPSPIEGIRTASQQQQLVATSYADTGSIVKYDTEAAAAAETIKAPNTYANLVTVTNPPAQTIEYTQYLSNNETSFQPASTYSYHKPGDPVIFYPSATQIGSRSSEVESPGSTYMKSDPTLSSSLTATRAVPLYEQPGSPGTQSGLTLYNTGSYQYVKPPGDVYSWPANSTPSPPTDYVQQYQNSVISVTDANMQLYSGYSISSSANGPPSAWTTIPLTGPDDAFEGPVMAAEPKECANCAASMTPLWRRDGSGHYLCNACGIHGRINGMSRLGPMRCPKPKQSVTPVNITGVRRTGVQCANCRTSTTTLWRRNNNGEPVCNACGLYYKLHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268667;
- 90% Identity
- iTF_01267945; iTF_01267222; iTF_01270872; iTF_01268667;
- 80% Identity
- -