Pcub016313.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- Gata5
- Assembly
- GCA_014825685.1
- Location
- QVOA01017435.1:5871-14727[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-15 1.8e-11 43.8 2.2 1 33 490 521 490 523 0.94 2 2 6.4e-18 2.2e-14 53.2 7.5 1 35 553 586 553 587 0.97
Sequence Information
- Coding Sequence
- ATGCGACATCCAAAAGAGAGCACGATGGAAGAGAGAATAATCAAACAGGAGATCAAGATAGAATGGGACAATCATCACGCGAGTGAGAGTTCGCCGCAGGTAACCGGTACGGAAGATCAGACAGCCGGGAGTCCTCAGAGTGTTATCACGACTAGAAGACACGTGAGAACGATCACCACCGCCGGTCACATTACCGAGGGAATCGCCGAGGTCGATCCGGAGTCGCCGGATTCCAACTCCGTCACCAGGAATCTTCATCAGGGACTTCATCAACAGAGAAACGAACAACACGAACAAGCTCCGCAACAAACACAACAGCATTACGTGCAGATTTCTCATCCGGGCGCCGAGGATCAGCAACAATCGGCGGATCAGCGAGTCGTTTACGCCACCAGCAATGGGCAAGAGGTTCAGGTCGAGGTGACGGAAACCTCGGAGGCTATCACACTTACGGTCAAGGAACCGCCCAGATACGAGGCACCCACGCCAGATAGAACAGAAGTAGATAACCGCATGTACGGTTATCCCGAGGGACACGAAGTCCGCAAAGAAAATCATGTTATCGCCGTGGCCGACCGTCGACGAACCAGTCATCAGAGGTTCAGTCCTCACGAGCATCATCAGTCAACGGGAACGAACGCAAATGCAAGATATCAGGGATCGCCAGTGCTTACCGCCACGGAGGAATACGACGCGTCGACGATCGTCACCCAAACCGGATCAGCGGTTCATCTCGGTTCACCGGCGCAACCGTATTCGCCGTCGCCGATCGAGGGAATTCGCACCGCGAGTCAGCAGCAACAGCTCGTGGCGACGAGCTACGCCGACACCGGCAGCGTCGTCAAGTACGACACCGAGGCCGCCGCAGCCGCGGAAACTATCAAAGCTCCTAACACGTACGCCAATTTGGTGACGGTCACTAATCCGCCCGCACAAACTATCGAATACACGCAATATTTCTCGAACAATGAAACCTCCTTCCAACCGGCCTCGACGTACAGTTACACCAAGCCGGGAGACCCTGTCATCTTCTATCCATCGGCGACGCAGATCGGATCGAGATCTTCCGAGGTGGAATCACCCGGTAGCACATACATGAAGAGTGATCCCACGTTATCTTCATCCCTAACTGCCACTCGCGCGGTGCCGCTGTACGAACAACCTGGTTCACCGGGTACTCAATCCGCATTGACTTTGTACAACACGGGGACATCGTACCAATACGTGAAACCACACCCAAGTGAAGTTTACTCGTGGCCAGCCAATAGCACGCCCTCGCCCCCAACGGATTACGTCCAGCAATATCAGAATAGCGTGATCTCCGTCACTGACGCCAATATGCAACTTTATTCGGGATACAGCATTTCGTCGAGCGCGAACGGGCCACCCTCTGCGTGGACCACCATCCCGCTTACCGGTCCTGACGACGCGTTCGAAGGACCTGTCATGGCTGCGGAACCGAAAGAGTGTGCCAATTGCGCAGCATCAATGACGCCGTTGTGGAGACGCGACGGATCTGGTCACTATCTGTGCAACGCCTGCGGGATTCATGGCAGAATTAACGGCATGAGCAGACTGGGACCCATGAGGTGTCCCAAGCCGAAGCAGTCGGTCACGCCGGTAAACATTACCGGCGTGCGACGGACGGGGGTTCAATGTGCAAATTGCAGGACCAGCACAACAACACTCTGGCGTCGGAACAACAACGGTGAGCCAGTTTGTAACGCATGCGGACTTTACTATAAGTTGCATAACGTGAACAGGCCTCTGAGCATGAAGAAGGAAGGAATACAAACGCGAAAGCGTAAGCCGAAGAATCACTCGGGCATCACCGGAAGTCTACCAGGGCCCAGTATCCACAAGACCGAGATCAAGCCCAGCTTACTCGTGGACTCGGTGCAGTCGAATGTGTACGCAAGCGGGGGTGGGGGTAGTGGAGGGGTCGAAGAGCATTGTTTTCCTGTAGGTACACCAACTGGAACACAAGTAGAGCATGCACACTCGCCCCTTACATTACCTACCGCCGCTGTGTTGAATCACCAAACCACCCTTACCGTGCCACCCATAGAGCCAATAACTAGTCAATCCAGTAGTGACCTCGCCTCGGTTATCACGTCAACTACGATTGCTCATACCGACAGATCGTAG
- Protein Sequence
- MRHPKESTMEERIIKQEIKIEWDNHHASESSPQVTGTEDQTAGSPQSVITTRRHVRTITTAGHITEGIAEVDPESPDSNSVTRNLHQGLHQQRNEQHEQAPQQTQQHYVQISHPGAEDQQQSADQRVVYATSNGQEVQVEVTETSEAITLTVKEPPRYEAPTPDRTEVDNRMYGYPEGHEVRKENHVIAVADRRRTSHQRFSPHEHHQSTGTNANARYQGSPVLTATEEYDASTIVTQTGSAVHLGSPAQPYSPSPIEGIRTASQQQQLVATSYADTGSVVKYDTEAAAAAETIKAPNTYANLVTVTNPPAQTIEYTQYFSNNETSFQPASTYSYTKPGDPVIFYPSATQIGSRSSEVESPGSTYMKSDPTLSSSLTATRAVPLYEQPGSPGTQSALTLYNTGTSYQYVKPHPSEVYSWPANSTPSPPTDYVQQYQNSVISVTDANMQLYSGYSISSSANGPPSAWTTIPLTGPDDAFEGPVMAAEPKECANCAASMTPLWRRDGSGHYLCNACGIHGRINGMSRLGPMRCPKPKQSVTPVNITGVRRTGVQCANCRTSTTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNHSGITGSLPGPSIHKTEIKPSLLVDSVQSNVYASGGGGSGGVEEHCFPVGTPTGTQVEHAHSPLTLPTAAVLNHQTTLTVPPIEPITSQSSSDLASVITSTTIAHTDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268667;
- 90% Identity
- iTF_01269465;
- 80% Identity
- -