Pelo033895.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- pnr
- Assembly
- GCA_014825605.1
- Location
- QVNY01014479.1:6922-9860[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9 1.9e+04 -3.2 0.1 8 15 65 72 64 74 0.80 2 3 4.6e-18 1.8e-14 54.5 3.2 1 34 157 189 157 191 0.97 3 3 6.9e-19 2.7e-15 57.1 6.2 1 35 216 249 216 250 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGTGGAAGCGGCGGGTACGGCGCAGGATCCGATTACCAACAGCAATCTCAGCAGCAGCAGCAGCAACACGGACAGCAACTCCAAGCGCCTGTCTACGTTCCCTCGTCCAGACCGGCGATACCATCCGCAGCCACGGCGCAATACCATTCTTTTCCTACTTCACCCTCGCCCGCATGGGAGAAAACGACATCCTGGCAGCACGGGGTGGAGACGTACGCGCATCACGCGCTCGCCGGTCACACGAGCGGCACCGCGGCGGCGATGGGTCCGCACGCCGGCCCCGGTCATCCGCACGCGGCCCATCCGCACGCGGCGCATCCGCACTCGACCGCGCTTGCTGCGGCAGCCCCGTTTTACGCGCAGAACGTGATGATGTCCTCCTGGCGTTACGACAGCGCCGGCTTCCAGCGTGCGTCGTATGACACGATGGACTTCCAGTTCGGCGAGGGTCGCGAGTGCGTGAATTGCGGCGCGATATCGACGCCGCTCTGGCGAAGGGACGGCACCGGTCATTATCTCTGCAACGCATGCGGACTTTATCACAAGATGAACGGCATGAACAGACCGCTCATCAAGCCTTCGAAACGACTGATGTCGGAATTTCAGACCGCTACGAGACGAATCGGTCTGTGCTGCACGAACTGCGGCACCCGCACCACCACCCTGTGGAGGCGCAATAACGAGGGCGAGCCGGTGTGCAACGCCTGCGGACTGTACTTCAAACTGCACGGGGTCAACAGGCCGCTGGCCATGCGAAAGGACGGCATACAGACGAGAAAAAGAAAACCGAAGAAGACACCGGAACCGAGCACCAGGTCGTCCGCAGATCACGAGACCGCTACCTCGACCACATCATCTCCTTCCACGGGTTGGGAGATATGTTTTCTATCTGATAAAATCATTAAATGTGAAATTAAAGAATAA
- Protein Sequence
- MFHGGGSGGYGAGSDYQQQSQQQQQQHGQQLQAPVYVPSSRPAIPSAATAQYHSFPTSPSPAWEKTTSWQHGVETYAHHALAGHTSGTAAAMGPHAGPGHPHAAHPHAAHPHSTALAAAAPFYAQNVMMSSWRYDSAGFQRASYDTMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLMSEFQTATRRIGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPSTRSSADHETATSTTSSPSTGWEICFLSDKIIKCEIKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267943;
- 90% Identity
- iTF_01267943; iTF_01270186;
- 80% Identity
- -