Pcub023724.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- pnr
- Assembly
- GCA_014825685.1
- Location
- QVOA01004881.1:5148-8096[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7 9.1e+03 -3.2 0.1 8 15 65 72 64 74 0.80 2 3 2.5e-18 8.4e-15 54.5 3.2 1 34 157 189 157 191 0.97 3 3 3.7e-19 1.3e-15 57.1 6.2 1 35 216 249 216 250 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGTGGAAGCGGCGGGTACGGCGCAGGATCCGATTACCAACAGCAATCTCAGCAGCAGCAGCAGCAACACGGACAGCAACTCCAAGCGCCTGTCTACGTTCCCTCGTCCAGACCGGCGATACCATCCGCAGCCACGGCGCAATACCATTCCTTTCCTACTTCACCCTCGCCCGCATGGGAGAAAACGACATCCTGGCAGCACGGGGTGGAGACGTACGCGCATCACGCGCTCGCCGGTCACACGAGCGGCACCGCGGCGGCGATGGGTCCGCACGCCGGCCCCGGTCATCCGCACGCGGCCCATCCGCACGCGGCGCATCCGCACTCGACCGCGCTTGCTGCGGCAGCCCCGTTTTACGCGCAGAACGTGATGATGTCCTCCTGGCGTTACGACAGCGCCGGCTTCCAGCGTGCGTCGTATGACACGATGGACTTCCAGTTCGGCGAGGGTCGCGAGTGCGTGAATTGCGGTGCGATATCGACGCCGCTCTGGCGAAGGGACGGCACCGGTCATTATCTCTGCAACGCATGCGGACTTTATCACAAGATGAACGGCATGAACAGACCGCTCATCAAGCCTTCGAAACGACTGATGTCGGAATTTCAGACCGCTACGAGACGAATCGGTCTGTGCTGCACGAACTGCGGCACCCGCACCACCACCCTGTGGAGGCGCAATAACGAGGGCGAGCCGGTGTGCAACGCCTGCGGACTGTACTTCAAACTGCACGGGGTCAACAGGCCGCTGGCCATGCGAAAGGACGGCATACAGACGAGAAAAAGAAAACCGAAGAAGACACCGGAACCGAGCACCAGGTCGTCCGCAGATCACGAGACCGCTACCTCGACCACATCATCTCCTTCCACGGGTTGGGAGATATGTTTTCTATCTGATAAAATCATTAAATGTCAAATTAAAGAATAA
- Protein Sequence
- MFHGGGSGGYGAGSDYQQQSQQQQQQHGQQLQAPVYVPSSRPAIPSAATAQYHSFPTSPSPAWEKTTSWQHGVETYAHHALAGHTSGTAAAMGPHAGPGHPHAAHPHAAHPHSTALAAAAPFYAQNVMMSSWRYDSAGFQRASYDTMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLMSEFQTATRRIGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPSTRSSADHETATSTTSSPSTGWEICFLSDKIIKCQIKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01269462;
- 90% Identity
- iTF_01269462;
- 80% Identity
- -