Pelo011727.1
Basic Information
- Insect
- Pseudomyrmex elongatus
- Gene Symbol
- dl
- Assembly
- GCA_014825605.1
- Location
- QVNY01008576.1:15096-16100[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-29 2.2e-25 91.0 0.0 1 166 6 171 6 174 0.86 2 2 2.5 2.5e+04 -3.5 0.0 22 38 184 200 183 206 0.72
Sequence Information
- Coding Sequence
- ATGAGCGCTCCGCAAGTTAAAATTGTGGAACAGCCAGCTACACATCAAATCGGTAGTTCGAGAGACTACAAGCCGAACCTTTCGATTCGCGGAATCCATAGCTTGGGTAAAAGAAAAACATTTCCCGTTGTGGAAATTCGAGGATGGAAGGGTCCTCTTAAGATAATCGTGTCGCTCGTGACGAAGGATCCGCCGCACTACCCTCATCCTTTTCGACTGATCAATAATATACGGTGCAAGAATGGCGTTTACGAGGAATTTCTTCCGAAAGGGAGTAAAAACAAGTACGTTATTTTGTCAGACGTCGCCATTCAACGTAAGGACCGAGTAGACGTCGCAGACTCTATCAAAGAGCGCGAGGAAATCAACGTGGATCCCTTTAAGACTGGCTTCGAATACACGTTCACGGACGACGATCTTTTCTACTTGAGATTGTGCGCTCACGTGTATTTGCAAGACACGCGGGAAGGCGCGTGCGATGTCGCATTAGCACCCGTTGTATCCAATATTATGTTTGTCAGAGGAGCCATAAGAAAAGAACGGTTTTATTCGATAGGCTCGGTCTCAAGCTCGTCCTCGGAAGACGAAGAAGAACTTGTAGAACAACTAAAGTTAAAATTCAGACTTGAAGAGGAATATCCTTTGCTTTTTCCGGAAGATCCGTTTTAA
- Protein Sequence
- MSAPQVKIVEQPATHQIGSSRDYKPNLSIRGIHSLGKRKTFPVVEIRGWKGPLKIIVSLVTKDPPHYPHPFRLINNIRCKNGVYEEFLPKGSKNKYVILSDVAIQRKDRVDVADSIKEREEINVDPFKTGFEYTFTDDDLFYLRLCAHVYLQDTREGACDVALAPVVSNIMFVRGAIRKERFYSIGSVSSSSSEDEEELVEQLKLKFRLEEEYPLLFPEDPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267322;
- 90% Identity
- iTF_01267322;
- 80% Identity
- -