Pden018265.1
Basic Information
- Insect
- Pseudomyrmex dendroicus
- Gene Symbol
- dmrta2
- Assembly
- GCA_014825645.1
- Location
- QVNZ01019083.1:13392-14713[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-28 3.3e-24 85.0 10.8 1 47 42 88 42 88 0.99
Sequence Information
- Coding Sequence
- ATGTCGCTACCCCGCGGTGTCGATCTCGGCGTCGATGTGGGCCAACTGATGCAGCACCAGCAGCAGCAGCAACATCACGTGCTGCCGGCCGCGTTTTTTCTGCGCGCCAACGAGAGATACCAACGTACACCCAAGTGCGCACGATGCCGTAATCATGGAGTCGTGTCCGCGCTCAAAGGGCACAAACGCTATTGCCGGTGGCGGGATTGCGTGTGTGCTAAGTGCACCCTCATCGCCGAGAGGCAACGCGTTATGGCTGCTCAGGTCGCGCTGAGACGGCAACAGGCCCAGGAGGAAAGCGAGGCGCGCGAATTGGGCCTGCAATTGCAATATAACGCCGGCAGCTGTACCACCGCTCCGGTTCTGCCGGCGACCGCCGGTACACCAGCCGGTAGTCCGCCCCCGCATTCGGCGCACGTAGCGAGTCCGGCGGGTCTCGCGATACCCGCGGCGGCCGCGGCAGCCGCCGCCGCCGCCGCCGCACATATCCAGACGCAGCTCCAACAGCAGCAACCCGCGGAATGTGGTCTGTTGCCGCGAAAAAGGTCTACCCAGGACGAGTATCGGCAGCCGAAGATCGAGAAGAGCGACGCGGTCGTCGCCGGTGAGTGA
- Protein Sequence
- MSLPRGVDLGVDVGQLMQHQQQQQHHVLPAAFFLRANERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNAGSCTTAPVLPATAGTPAGSPPPHSAHVASPAGLAIPAAAAAAAAAAAAHIQTQLQQQQPAECGLLPRKRSTQDEYRQPKIEKSDAVVAGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00867420;
- 90% Identity
- iTF_01271236;
- 80% Identity
- -