Pden016716.1
Basic Information
- Insect
- Pseudomyrmex dendroicus
- Gene Symbol
- retn
- Assembly
- GCA_014825645.1
- Location
- QVNZ01022759.1:1-4415[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-20 6.3e-17 62.3 0.0 17 89 15 85 5 85 0.90
Sequence Information
- Coding Sequence
- ATGAGCAGCCGTCGTGCCACATATAGAGCGTATCTCGCAATAAGAACTCCCATAAATCGACTACCAATCATGGCGAAATCTGTCCTGGATCTATTTGAACTTTACAAACTGGTCATACAACGAGGCGGACTCGTCGAAGTAATCAACAAGAAGCTTTGGCAGGAAATCATCAAGGGTCTGCGATTGCCGGCAAGCATTACATCCGCCGCGTTTACTTTACGAACTCAGTACATGAAATACCTGTATCCGTACGAACAGACGCACGAGAGACTGTCAACCAGCGGTCAGCTTCAGCAAGCAATTGAGACGAACAAACGTGAAAGTCGTCAAAAACCCAGTCCCCAAATGATGGGGGTCGCTTATCCTAATAGAGACAGCCAAGCTGCATTGGGAATTAATACTCTCCCGCTCGGCTTAACAGGCCCGATAACTCCAAGCGGATCGCAACAAACCCGTGGTCCGCACATGTTGATGCCCAACGGTAGTCAACATCCGCAGCATTTGTCACAAATGCCTAATGAAATGTTTATAGAATACGTGATGAAAATGATCAACGAACAACGAAGAAATTTACCACAAGACAACCAATCACAAACGTTAGAACCCTACGGGGGTACGTTGGCACGGATGATGTGGATGTGCCAACAAAACATATATCCTGGAAGACCGCCCACTCCAGAACCTTCTCCACCTACTCCAACACCGCCCACTCCAGAACCGCAAGCTCTCGATCTAGCAAGATCGGACTCAGATCGTTCCAGTAGACCTGTCAGTCCACGAAATGAGCCATCCACATCAAGGAGAGAAAATCGTGAAAGTACAGATCAGCTACCAACATCAAATTGTAAAAGAAAATCTTATTCTGATGATGAGGAACCGCCTGAAAATAACAGAAAAGGCAAAGCTATGAAGACTCAAACACCCAGGACACAAACATTTACTATTCGCG
- Protein Sequence
- MSSRRATYRAYLAIRTPINRLPIMAKSVLDLFELYKLVIQRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEQTHERLSTSGQLQQAIETNKRESRQKPSPQMMGVAYPNRDSQAALGINTLPLGLTGPITPSGSQQTRGPHMLMPNGSQHPQHLSQMPNEMFIEYVMKMINEQRRNLPQDNQSQTLEPYGGTLARMMWMCQQNIYPGRPPTPEPSPPTPTPPTPEPQALDLARSDSDRSSRPVSPRNEPSTSRRENRESTDQLPTSNCKRKSYSDDEEPPENNRKGKAMKTQTPRTQTFTIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01266685;
- 90% Identity
- iTF_01267335; iTF_01270985; iTF_01266685;
- 80% Identity
- -