Basic Information

Insect: Pseudomyrmex concolor
Gene Symbol: ZFX
Assembly: GCA_014839585.1
Location: QVOB01016558.1:159-1808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.18 20 6.3 2.5 1 23 55 78 55 78 0.81

2 14 0.00029 0.033 15.0 3.1 3 23 166 187 165 187 0.97

3 14 0.0034 0.39 11.7 0.1 2 23 200 221 200 221 0.98

4 14 5.7e-06 0.00065 20.4 2.3 2 23 224 245 223 245 0.97

5 14 0.00071 0.08 13.8 0.3 1 23 251 273 251 273 0.96

6 14 1.1e-05 0.0013 19.5 4.4 2 23 280 301 279 302 0.95

7 14 0.035 4 8.5 3.7 5 23 315 333 314 333 0.97

8 14 2.9e-06 0.00033 21.3 2.2 3 23 340 361 339 361 0.97

9 14 0.013 1.5 9.8 0.0 2 23 377 397 376 397 0.96

10 14 1.2e-05 0.0013 19.4 1.2 1 20 403 422 403 425 0.92

11 14 2.7e-05 0.003 18.3 2.7 1 23 433 455 433 455 0.99

12 14 0.00075 0.084 13.7 3.2 1 23 461 483 461 483 0.97

13 14 1.4e-06 0.00015 22.4 3.9 1 23 489 511 489 511 0.99

14 14 0.00047 0.053 14.4 6.3 1 23 517 539 517 540 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.18	20	6.3	2.5	1	23	55	78	55	78	0.81
2	14	0.00029	0.033	15.0	3.1	3	23	166	187	165	187	0.97
3	14	0.0034	0.39	11.7	0.1	2	23	200	221	200	221	0.98
4	14	5.7e-06	0.00065	20.4	2.3	2	23	224	245	223	245	0.97
5	14	0.00071	0.08	13.8	0.3	1	23	251	273	251	273	0.96
6	14	1.1e-05	0.0013	19.5	4.4	2	23	280	301	279	302	0.95
7	14	0.035	4	8.5	3.7	5	23	315	333	314	333	0.97
8	14	2.9e-06	0.00033	21.3	2.2	3	23	340	361	339	361	0.97
9	14	0.013	1.5	9.8	0.0	2	23	377	397	376	397	0.96
10	14	1.2e-05	0.0013	19.4	1.2	1	20	403	422	403	425	0.92
11	14	2.7e-05	0.003	18.3	2.7	1	23	433	455	433	455	0.99
12	14	0.00075	0.084	13.7	3.2	1	23	461	483	461	483	0.97
13	14	1.4e-06	0.00015	22.4	3.9	1	23	489	511	489	511	0.99
14	14	0.00047	0.053	14.4	6.3	1	23	517	539	517	540	0.96

Sequence Information

Coding Sequence: ATGTCTACTTCTTACGATTTACTGGCGCGCGAAAGCTGGGAAGAATCGGAAGGATCCGACAACGAGATTAGCGGACCGTTGTTGGACAGCAGATCGCTAGCAACGCACTTTACTTCGAGTCTGTTTTTGGACCGGGATCGAAAGACACCGACCAAACGGACGTTCAAGTGTTCCTATTGTAACGAGGTGTTCGATTGCCCAAAAGAGCGTAGAGTCCACAGCACGACAGTGCACAAAGAAGCGATTCCCAGTAGCAGTAGAGACCAATTGGATCAACCGGAAATGAAAGATATCAAGTTGTTGGACAATCGCGTGAACATGTTCGACGATCTGTTCGTGCCAAGTCTTCACATGCAGCAGATGTATCATCAGCAGCCACTCTTGCATCAGCTGCAGCCGCCGCCGCAACCTAATTCGGAAGTTGGTCTAACAAAGGCTGAGAGTGAGCAAAAGATCGGTGAGAATTTGGCGTTACCGTCGAATATCGAAGCGATTTGTACAATATGCAATCAACGATTCAATAGCGAAAAGTCTCTGCAGTTACATCACAGACGCATGCACATCGCCGAAGTGAACAAACGTATACGCGAGAACGCTAAGTGTCAGATATGCAACGAAGAATTCCCGTCGGTGTTGCTGTTTAACGCCCATCTAAAGATACACCCGTTGGAGTGTGGGCAGTGCGGCAAGTATTTCTACCGCAAGCAAAACTTCAAACTTCACATGAAACGACATTTGGGTATTAAACCGTTTCCGTGCACCGTATGCGACAAAGCGTTTCTTACCAAGCAGAAATTGGAAGAACACACCAATGGTCACACCGGTAACGCGCCAGTAAAGTGTAGTCTGTGCAACGAGACCTTCCGCAGGTATTCGAATTTAACTCAGCACAAAAACCGTCATCATCTCAATATCAAGAAGAAGCTCAAGGACTATATATGTCACTGCGGCGAAGTGTTTCACACAAAGAAGAAGCTTGCTTGGCACAAAGAGACGCACGATGAGAAGCCCAAGGCGTGCACGTACTGCAACGAACGTTTTATCCACATGTCCAGCCTGACGCGTCATATGCGTCGTGCTCACAATCGGCGATTCGTGCCCGACGCTCAGCGTGAAAGTGAGAACGTCGAGTGCCCCGTTTGTAATAGCATCTACTTGCGATCGTCACTAGCGGTGCACATGCGCGTTCACAACGGCGAACGGCCGTACGAATGTCAAGTCTGCTCGAAGTCGTTCAGCACCAAATGGAATCTGCAGTTGCACAAGTGGACTCACGCCGCCCGCAGCACCAAGCCGTTCAAGTGTAATCAATGCAGCGCGGCGTTCTACCGTCACAGCGACTACACGGCGCACATGAACTCCCACCGAAATGTACGGCCGTATACATGCAACTACTGTGGCGCACAGTTCATCCGTAAGTACAACTGCCTGCGACACGTGAAGGAGCATGAAGAGAACAAGGCGTACACGTGCGACGTGTGCAACAAGACCTTCCATCGCTCGTACTATCTGAAGGAGCACTTGAGAGTGCACTCGGGCGCGCGACCGTACACGTGCCACATCTGTGGCAAGTCCAGCGGCACCAAGTCTAATCATAACAAGCACGTGCGAATTCATCACGCGCGTGAACCTGTAAATACAGAGAACTAA
Protein Sequence: MSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSYCNEVFDCPKERRVHSTTVHKEAIPSSSRDQLDQPEMKDIKLLDNRVNMFDDLFVPSLHMQQMYHQQPLLHQLQPPPQPNSEVGLTKAESEQKIGENLALPSNIEAICTICNQRFNSEKSLQLHHRRMHIAEVNKRIRENAKCQICNEEFPSVLLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVKCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMSSLTRHMRRAHNRRFVPDAQRESENVECPVCNSIYLRSSLAVHMRVHNGERPYECQVCSKSFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389664;
90% Identity: -
80% Identity: -