Phyg018667.1
Basic Information
- Insect
- Pseudolycoriella hygida
- Gene Symbol
- nfxl1
- Assembly
- GCA_029228625.1
- Location
- CM055404.1:32279752-32285409[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.3 2.5e+04 -3.0 1.4 14 19 175 180 175 180 0.86 2 18 0.59 1.1e+04 -1.9 0.5 4 10 211 217 211 217 0.93 3 18 1.1e-07 0.002 19.7 17.3 1 19 225 242 225 242 0.99 4 18 0.0057 1.1e+02 4.6 15.0 1 19 278 297 278 297 0.96 5 18 2.2 4.1e+04 -3.7 1.2 6 10 322 326 321 326 0.91 6 18 1.5e-08 0.00029 22.4 12.4 1 19 332 350 332 350 0.99 7 18 2.5 4.6e+04 -3.8 2.5 13 18 373 379 373 380 0.77 8 18 4.1e-05 0.77 11.4 10.4 3 18 387 402 385 403 0.90 9 18 0.27 5.2e+03 -0.8 0.7 1 5 412 416 412 421 0.75 10 18 0.0005 9.5 8.0 15.0 1 18 437 454 437 455 0.94 11 18 1.2e-08 0.00023 22.7 16.0 1 19 464 482 464 482 0.97 12 18 3 5.7e+04 -7.3 5.7 4 6 513 515 510 523 0.47 13 18 0.17 3.2e+03 -0.1 8.0 10 18 529 537 526 538 0.92 14 18 0.033 6.3e+02 2.1 5.9 4 12 552 560 550 560 0.89 15 18 0.00026 4.9 8.9 6.3 1 12 631 642 631 642 0.97 16 18 1.5e-05 0.28 12.9 11.9 3 18 671 686 670 687 0.93 17 18 3 5.7e+04 -5.1 2.0 9 13 693 697 692 697 0.74 18 18 9.3e-06 0.18 13.5 9.1 1 16 737 751 737 757 0.85
Sequence Information
- Coding Sequence
- ATGAGTACAAAACGTGATATAAACAATCCGTGGAGCAACAAAACATCTCCAGCCAATGCGATCAATTCAAAATCGAAGAATGGCTCTGTAGCTACAAATCCAAAGAATAAACCGGCAgaccaaaaatttaaagaagcaAAGAAAAAGCATGAAGAATATGCGAAGAAACACAACATTTTGGAATACGATTCCAGCTCGGACGAAGAATTTGAAGCCGGCTCTATGCTCGAATCGGTTTTCAAGAATTACGTCGGTGATAATTCAGAGCTTCAGAGAACTCAggattttttagaaaatgtttttcaatcagGAGCCGCGACTTGTCTCATTTGCATTGCAACCGTTAAGCGTACTGAAGCCATATGGTCGTGTGAGCATTGCTTCTGTTTCTTTCACTTGGCCTGCATACAACGCTGGGCAAACGATTCAACATCTTTGAAGAAACTTCAGTACGAATCTGAAGTGGACTACTACAACAATCGTGGCGAACTGATCGTTCGACAAAAGAAGACCATCAAATGGGACTGTCCCAAGTGTCGCAAGGATTATAACTTGAGCGAGGTACCGAAGCACTACACCTGTTTCTGTTCCAAAGAACTGAATCCACAAAATCATCCTTGGTTGATACCTCACTCATGCGGTGACACATGCGGAAAAGCACTAAAACCAGACTGTGGACATAAATGTGTTTTGCTTTGCCATCCAGGACCCTGTCCACCATGTCCTCAAGTAGTTATGACGTCCTGTGTATGTGGAACATCAAATCCCAAATCTATGCGATGcgcacaaaaaacttggaaatgTGTGTCGAAGtgcaaattgaaattgaaatgtggAATTCATGTTTGTGGACAAGGATGTCACGAAAAGAACAAGTGTCCTCCTTGTTCAAAGAAAAGCAAACAGTCGTGCTTGTGTGGGAACAGCTTCCTGGAACGTAATTGCGATGATTTAATCTGGCACTGCGAAAAGAAATGCAATAAAAGTTATTCGTGTGGACTGCACACCTGTCAATTAAAATGCCACGTTGGCGATTGTGGTGATTGTCCTCTTGGATTGCCAAGGGAATGTCCTTGTGGAAAGCAGAAAAGTAAAGCTCCATGTTCCGAAGAGATTGGTCCttgtggtgacacctgtcagaAAATGTTGGCTTGTGAACTTCACATCTGCGTCGAAAGATGTCATAAAGGGAACTGCTCTCCGTGCAACGAAATCATTTTAAAGCAATGTCGTTGCGGGCAACATTCCAAAGAGCTGCCATGCTCTAAGTCGTTTCTCTGCGAAACGAAATGCAAGCAAATGAGAGATTGCAACAAGCATACGTGCAGCAGGAAATGTTGTGATAATCAGTGCCCGCCGTGTGATAAAGTTTGTGGTAAAACACTTTCTTGTGGAAAACACAAATGTACGTCGCTATGTCATCACGGACCTTGCTACCCGTGTACGGCAAAAGCACCAGTTAAGTGTCGATGTGGTAAAACGGTCATTAACGTAGCTTGTGGTAGAGAAAAGAAAGTTAAACCACCAAAGTGTTCACATCCGTGCCGCATTCCATCGAAATGTCATCACGATAATCCTCATAACTGTCACCAGAACGAATGTCCACCGTGCAATCAGTTATGCTTATTGCCCAATGATACAACCAATTGCGATCACCCATGCCAAGCCAAGTGTCACGATTCTGTGAAAGTTTCCattatcgacaaaaaattcaaaccagCCGGCCCATGGGAAAAACAAGTGGAGCGCATCGAAATACAAAAACTTCCCCATCCGCCGTGCGAAGTCGAAGTTCCAGTTGTTTGTATCGGCGGTCATGAAAAAGTCTTATGGACTTGCTGGAATTCGCAACCGTCTTCGTGTGGAAGGAAATGCGGCCGTCAACTGTTTTGCGGCAATCATTTCTGTCAAAATCAATGCCACGAAGTGACTGACTTGAATGGTAAAATGCAGGACGATTTGTGCAGTCAATGTGAGGAAGATTGCATTTTCGAAAGATCAAACGGATGCATACATCCATGTCAACGGCCTTGTCACACTGGCGAATGTGATTTATGTCTTGCGAACATAAAAACAACGTGTCATTGTGGGCTAACGCAAGTGTATTACAAGTGCGGGGATTACTATCGTAACGACGATGAAAATGTGTTGACTGCTGATCGAGAGAAACTCAGAAGCTGTTTAAATCGATGTATTAAAAATTACGAGTGTGGGCATCGCTGTGTGGATATTTGTCACTCTGGAAAGTGTCTGAATTCGGAATCATGTAAAAAGAAGTCCAAAGTATACTGCGACTGTAAGACTCGAAAAGTTGACGCTACATGCGATAAGATACGGGCTGGCTTCCGGTTGAACTGCGACGATTCCTGTAAGGTGCGACTCGAGGAAATGCGTTTGGCTGCCGAGGAACAGGagagaaaacaaaaagaaattgaagatGAAAAAAATCGCTTGGAGATGTTggattttgaaaagaaattcggaaaaaagaaGTTCAAAGAAAGAAAGCGAAATGTAGTCGAGGAAACTGAAAGCAAAATGTGGATGTTTTGGATCGGTATTCCTATTGTACTAACTGTAGTTAGTGTTGCTTTATACTACGTTTTTGCTAAGGGTTAA
- Protein Sequence
- MSTKRDINNPWSNKTSPANAINSKSKNGSVATNPKNKPADQKFKEAKKKHEEYAKKHNILEYDSSSDEEFEAGSMLESVFKNYVGDNSELQRTQDFLENVFQSGAATCLICIATVKRTEAIWSCEHCFCFFHLACIQRWANDSTSLKKLQYESEVDYYNNRGELIVRQKKTIKWDCPKCRKDYNLSEVPKHYTCFCSKELNPQNHPWLIPHSCGDTCGKALKPDCGHKCVLLCHPGPCPPCPQVVMTSCVCGTSNPKSMRCAQKTWKCVSKCKLKLKCGIHVCGQGCHEKNKCPPCSKKSKQSCLCGNSFLERNCDDLIWHCEKKCNKSYSCGLHTCQLKCHVGDCGDCPLGLPRECPCGKQKSKAPCSEEIGPCGDTCQKMLACELHICVERCHKGNCSPCNEIILKQCRCGQHSKELPCSKSFLCETKCKQMRDCNKHTCSRKCCDNQCPPCDKVCGKTLSCGKHKCTSLCHHGPCYPCTAKAPVKCRCGKTVINVACGREKKVKPPKCSHPCRIPSKCHHDNPHNCHQNECPPCNQLCLLPNDTTNCDHPCQAKCHDSVKVSIIDKKFKPAGPWEKQVERIEIQKLPHPPCEVEVPVVCIGGHEKVLWTCWNSQPSSCGRKCGRQLFCGNHFCQNQCHEVTDLNGKMQDDLCSQCEEDCIFERSNGCIHPCQRPCHTGECDLCLANIKTTCHCGLTQVYYKCGDYYRNDDENVLTADREKLRSCLNRCIKNYECGHRCVDICHSGKCLNSESCKKKSKVYCDCKTRKVDATCDKIRAGFRLNCDDSCKVRLEEMRLAAEEQERKQKEIEDEKNRLEMLDFEKKFGKKKFKERKRNVVEETESKMWMFWIGIPIVLTVVSVALYYVFAKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246865;
- 90% Identity
- -
- 80% Identity
- -