Bodo008467.1
Basic Information
- Insect
- Bradysia odoriphaga
- Gene Symbol
- nfxl1
- Assembly
- GCA_016920775.1
- Location
- JAFDOW010001071.1:326150-330108[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.87 7e+03 -3.0 1.4 14 19 175 180 175 180 0.86 2 19 0.99 8e+03 -3.1 0.4 4 10 211 217 211 217 0.84 3 19 7.1e-08 0.00056 19.7 17.3 1 19 225 242 225 242 0.99 4 19 0.00016 1.2 9.0 10.2 1 19 278 297 278 297 0.95 5 19 5.5e-09 4.4e-05 23.2 13.7 1 19 332 350 332 350 0.99 6 19 1.6 1.3e+04 -3.8 2.5 13 18 373 379 373 380 0.77 7 19 2.6e-05 0.21 11.5 11.1 1 18 385 402 385 403 0.93 8 19 0.18 1.5e+03 -0.8 0.7 1 5 412 416 412 421 0.75 9 19 0.0019 15 5.5 14.2 1 18 437 454 437 455 0.94 10 19 8e-09 6.4e-05 22.7 16.0 1 19 464 482 464 482 0.97 11 19 1.6 1.3e+04 -3.8 1.2 5 10 510 515 510 515 0.83 12 19 0.21 1.7e+03 -1.0 7.3 10 18 529 537 526 538 0.91 13 19 0.16 1.3e+03 -0.6 6.5 3 12 551 560 550 560 0.88 14 19 0.00015 1.2 9.1 5.9 1 12 631 642 631 642 0.97 15 19 1.4 1.1e+04 -3.6 3.5 15 19 655 659 654 662 0.66 16 19 1.8e-05 0.14 12.0 12.4 3 18 671 686 670 687 0.93 17 19 1.5 1.2e+04 -3.7 1.5 9 13 693 697 691 697 0.76 18 19 8.2e-07 0.0066 16.3 8.9 1 16 738 752 738 758 0.90 19 19 1.1 9e+03 -3.3 0.7 5 10 786 791 786 791 0.91
Sequence Information
- Coding Sequence
- atgaccACCAAACGCGATGTAAACAATCCATGGAATAATAAACCATCGTCTGGCAATCCGGCGAATGCAAAATCGAATAAAGGATCTGCAAATGCGAAACCAAAGAATAAACAGGCAGATCAAAAGTTTAAAGAAGCAAGGGAGAAACATGAGGAATATGCCAAAAAGCACAACATTTTGGACTATGACTCAAGTTCTGACGAAGACCTGGAAACGGGATCTATGCTCGAATCCGTATTCAAGAACTATGCCGGTGATAACGCAGAGCTTCAGCGTACACAggattttttggaaaatgtttttcagtcaGGTTCGGCGACTTGCCTAATTTGCATCGCAACAGTTAAGCGTACCGAGGCTATATGGTCGTGTGGGCATTGTTTCTGCTTTTTCCACTTGGCGTGCATACAACGTTGGGCGAATGATTCGACGTCACTGAAGAAACTCCAGTACGAGTCGGAGGTTGATTACTATAACAACCGTGGCGAATTGGTGGTTCGACAGAAGAAAGTTGTGAAATGGGACTGTCCAAAGTGTCGCAAGGATTACAATTTCAGTGAGATACCAAAGCACTACACCTGTTTTTGTGAAAAAGAATTGAACCCACAAAACCATCCATGGTTGATACCCCACTCTTGCGGTGATTCGTGTGGAAAGGCCCTGAAGCCAGATTGTGGACATAAATGTGTTTTGCTATGCCATCCCGGTCCCTGTCCACCATGCCCGCAAGTTGTAATGACATCTTGTCTATGCGGTACATCCCAGCCGAAATCGATGCGTTGCGCCCAAAAGTCCTGGAAATGTGTGTCCAAGTGCAAGTTGAAGCTCAAGTGTGGAATTCATGTGTGCGGATTGATTTGTCATGACCGAAGCAAGTGTCCACCATGTTCGAAGAAAAGCAAGCAGTCCTGTTTGTGTGGCAACAGTACGCAAGAACGCAATTGTGACGACCTGGTGTGGCAATGCGATAAGAAATGCAATAAGTTGTATCCATGTGGAATACACACATGCCAGCAAAAATGTCATATCGGCGATTGTGGTGATTGCCCACTGGGAAGACCAAGAGAATGTCCTTGCGGAAAGCAGAAAACGAAAGCGCCATGTTCCGAAGAAATTGGCCCCTGTGGTGATACTTGCCAGAAAATGTTGGAATGTGAACAGCATATCTGTGTCGAACGATGTCATAAGGGAAATTGCTCTCCGTGCATCgaaataattcgaaaacaatGTCGGTGCGGTCAACATTCCAAAGAGCTGCCGTGTTCCAAATCTTTTCTTTGCGACACGAAATGCAAACAGATGAGAGATTGTAACAAGCATGCATGTAGTAGAAAATGTTGTGACAACCAGTGTCCGCCGTGCGATAAAGTATGCGGAAAAACTCTGTCTTGCGGAAAGCATAAATGCACATCGTTGTGTCACCATGGACCGTGTTATCCTTGCACGGCAAAGGCACCAGTGAAATGCCGTTGTGGCAAAACGGTCATCAATGTGGCTTGCGGCCGAGAGAAGAAGACAAAACCACCTAAGTGTTTGCAACCATGCCGCATCCCATCCAAGTGTCATCACGACAATCCGCACAACTGCCATCAATATGAATGTCCACCGTGTAATCAATTGTGTTTGTTGCCCAACGATACAACCAATTGCGAGCACCTTTGTCAGGTGAAGTGTCACGATTCTGTTAAGGTGTCATTCATCGACAAAAATTTCAAACCGGCCGGTCCATGGGAAAAACAAGTTGAACGGATCGAAATACAAAAACTGCCGCACCCACCGTGCAATGTCGAAGTTCCGGTAGTATGCATCGGTGGTCACGAAAAAGTTCTGTGGCCCTGCTGGAATTCGCAACCGTCATCCTGTGGTAGAAAATGTGGCCGGCAGCTGTTTTGTGGCAATCACTTTTGTCAGAATCAGTGTCACAGTGTGACCGACATGAATTCCAAAATGCAGGACGATTTATGCGGTCCGTGTCAGGAGGATTGTATCTTTGAACGATCAAACGGATGCATCCATCCCTGTGAACAACCTTGTCACACGGGCGAATGCGATTTATGTGTTGCTAACATCAAAACGGTTTGTCACTGTGGACTGACGCAGGTGTATTACAAGTGTGGAGACTATTACCGGCACGAAACCGATGAGAATGTTTTGGCGGCAGATCGTGAGAAAATGAAAAGTTGCGGCAATCGATGCATCAAAAATTACAACTGTGGACATCGCTGCATAGACGTTTGCCATTCAGGAAAGTGTCTGAATTCCGAAGCATGCAAGAAGAAGTCGAAAGTCTACTGCGAATGTAAAACGCGAAAAGTCGATGCCACTTGTGACAAAATTCGTGCCGGTTTTCAATTGACATGCGATGATACGTGTAAAGTGCGCCGTGAGGAAATGCGTCTGGCTGCCGAAGAGCAAGAACGGAAGCAAAAAGAGATCGAAGACGAAAAGAATCGCTTGGAGATGTTGGACTTTGAGAAGAAATTCGGTAAGAAGAAGTTCAAGGAACGAAAACGGAGCGTGGTTGAGGAAACTGAGAGTAAAGTCTGGATGATCTGGATTGGTGTTCCGGTTGTATTAGCTGTAGTCAGTGTGATTGTGTATTTTGTCTTTGCTTGA
- Protein Sequence
- MTTKRDVNNPWNNKPSSGNPANAKSNKGSANAKPKNKQADQKFKEAREKHEEYAKKHNILDYDSSSDEDLETGSMLESVFKNYAGDNAELQRTQDFLENVFQSGSATCLICIATVKRTEAIWSCGHCFCFFHLACIQRWANDSTSLKKLQYESEVDYYNNRGELVVRQKKVVKWDCPKCRKDYNFSEIPKHYTCFCEKELNPQNHPWLIPHSCGDSCGKALKPDCGHKCVLLCHPGPCPPCPQVVMTSCLCGTSQPKSMRCAQKSWKCVSKCKLKLKCGIHVCGLICHDRSKCPPCSKKSKQSCLCGNSTQERNCDDLVWQCDKKCNKLYPCGIHTCQQKCHIGDCGDCPLGRPRECPCGKQKTKAPCSEEIGPCGDTCQKMLECEQHICVERCHKGNCSPCIEIIRKQCRCGQHSKELPCSKSFLCDTKCKQMRDCNKHACSRKCCDNQCPPCDKVCGKTLSCGKHKCTSLCHHGPCYPCTAKAPVKCRCGKTVINVACGREKKTKPPKCLQPCRIPSKCHHDNPHNCHQYECPPCNQLCLLPNDTTNCEHLCQVKCHDSVKVSFIDKNFKPAGPWEKQVERIEIQKLPHPPCNVEVPVVCIGGHEKVLWPCWNSQPSSCGRKCGRQLFCGNHFCQNQCHSVTDMNSKMQDDLCGPCQEDCIFERSNGCIHPCEQPCHTGECDLCVANIKTVCHCGLTQVYYKCGDYYRHETDENVLAADREKMKSCGNRCIKNYNCGHRCIDVCHSGKCLNSEACKKKSKVYCECKTRKVDATCDKIRAGFQLTCDDTCKVRREEMRLAAEEQERKQKEIEDEKNRLEMLDFEKKFGKKKFKERKRSVVEETESKVWMIWIGVPVVLAVVSVIVYFVFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246025; iTF_01266590;
- 90% Identity
- iTF_00246025;
- 80% Identity
- -