Phyg035588.1
Basic Information
- Insect
- Pseudolycoriella hygida
- Gene Symbol
- hang
- Assembly
- GCA_029228625.1
- Location
- CM055406.1:17411071-17423898[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0092 1.1 11.4 2.8 3 23 258 279 257 279 0.95 2 25 0.89 1.1e+02 5.1 2.7 2 22 361 381 360 381 0.93 3 25 1.3 1.6e+02 4.6 0.7 3 21 391 409 390 410 0.94 4 25 0.19 24 7.2 0.6 3 23 451 472 449 472 0.89 5 25 6.4 7.9e+02 2.4 0.2 2 21 484 503 484 504 0.92 6 25 0.14 18 7.6 0.0 2 23 512 534 511 534 0.88 7 25 0.00055 0.068 15.2 0.9 3 23 581 602 579 602 0.95 8 25 0.013 1.5 11.0 0.2 1 23 610 633 610 633 0.96 9 25 0.16 19 7.5 0.1 1 23 645 668 645 668 0.95 10 25 0.0019 0.23 13.6 0.1 1 23 671 693 671 693 0.98 11 25 0.038 4.6 9.5 2.5 1 23 699 722 699 722 0.96 12 25 0.00032 0.039 16.0 0.1 2 23 822 843 821 843 0.97 13 25 0.082 10 8.4 2.1 2 23 872 894 871 894 0.96 14 25 0.0021 0.26 13.4 0.3 2 23 903 925 902 925 0.95 15 25 0.0013 0.16 14.1 2.4 1 23 965 988 965 988 0.96 16 25 0.00021 0.025 16.6 0.8 2 23 1020 1041 1019 1041 0.97 17 25 0.054 6.6 9.0 5.2 2 23 1050 1072 1050 1072 0.96 18 25 0.0022 0.27 13.3 0.8 2 23 1080 1101 1079 1101 0.97 19 25 0.0024 0.29 13.2 4.6 2 23 1141 1162 1140 1162 0.96 20 25 0.028 3.4 9.9 0.0 1 23 1197 1219 1197 1219 0.92 21 25 0.002 0.25 13.5 0.2 2 23 1254 1276 1254 1276 0.91 22 25 0.72 88 5.4 0.1 2 23 1301 1322 1300 1322 0.93 23 25 2.4e-05 0.0029 19.5 0.1 3 23 1336 1356 1336 1356 0.98 24 25 0.00039 0.047 15.7 1.0 1 23 1466 1488 1466 1488 0.97 25 25 6.1 7.5e+02 2.5 1.2 2 23 1543 1565 1542 1565 0.87
Sequence Information
- Coding Sequence
- ATGACGGAAAGTCTCGTACGTCGAGGTGGATGTCGACTATGTTTAGCACCGGACTCTGAATGTGTACCAATTTTTGCGACTGCTGCAGCCGACAAAGAGCCCCTTTCATCAAAAATTCAGGCTTGTGTCAATATCAAAATCTATCAAGGTGACCGATTATCATCCCGTGTATGTCACGCCTGCATCAGCTACCTAAACTCATGGCAAAGCTTCAAAAATCGCTGTTATGCTGCACAGAAAAAACAGCGCGGAATGTTGGATACGTTTTTAGCCAAAGAACGGGCTAGAATTAAAAGTGCTTCTCAGCAACAGAATCCACAGCAGACACCACCTTCTGCGAATTCACAACGGCAGATTGACTCGTACCGACATCAACTTGAACAGCAGAGAATTTTAAAGGATGCTCTGAGTCAACCAAGCGGAAGTAGCGCTAACAAAAATGCACAAAATAACATTGATGTGAGTTTCATCAAATCGGAGCCCGTTGACGATATGCAAAATGAGACAGGAGTTGATGACGATGAGGATGTAGATCCCTCGCAATTTTTGGCTAGAGATAATGATGATGGAGATGAACTAGCTACTGAGGAAGAAGGAGGCGGCGGACCACCGATCTTAACATCTTTAGGTCTAACTCACATCAATCATGTGAATCCGTACAGTTTCTTGaGCACAGAACTCGGCAATGAAGTGCAATCCGAAACGGAAACCTCAGGGAATGCAACAACATTCACCCTAGCAAATTTCCGTCGACCTGGATCGCAGCCGTGTTGTACAGTATGCAATATGAAATTCTCGAATCGGGCAAACGCACGTCGCCATGAACGTAACATCCACGGCATAAAAGCTGACATTCTGACGTCAACTCCTCATGCACCTATACGACCCATTCAACAGATGCATACAGTCATGCGTCCCATAATGCGACCAATTATGCGCACTATGcaaaagaagaaaaaggtcATCCCACCGATAGTGTACGATTATACGAAACCGGAATTGTACCGCGAATTTTTGACCgattcaaaattgtatttcatcAAACGTCACATCGACTTTTTGGAACAGTATCAGAATATGAGATGCACCTGCTGCAACCGTGACTTTCCAACTTATAAAACATTTATGGTCCACATGCGCAAACGCTACGACACTCTATCTAGAAATTTGTGCTTTAAGTGTCTCAAGCAGTTCCAGTCGAAAGCCTTGTTTGTGGCTCATTTGAAAAAGAAGAATTGCCTCAATTTGTACAAAGTTTATTGTGCTGATGACACCGTTTCCAAAGAACCTCTGCCACCAATCCAAACACGTGTCGGCACCAAAGAAATAATAGCGAATAAAGTCTACGGCTGCAAATTGTGTTCGAAAACGTTCCGCTTGAAAATGGATTTCCGCGGTCATGTCTACGAAGCGCACGGTGATGTACAAAAGAAGGAGACAATAGGACCCGAATGTGGcttttgtaaaaatgtttttgaagatgCTAGCGTTCGCCGACGGCATTACAACAACATGGAATGCATTGTGTTCTTGATTTGCGGCACTTGTGATGAGAAATTCGATAATTTGTCCGCGTACATTGACCACGTCTACGCGGAACACTTAAAACCGAATCCAGATGGCTCCATACCGCCTATGCCAACTGATGCGATGAGCAGCTCGGAATTTAACAGTTCCAATGATCAAGATCCAACTTCACCAAGCTTACAGTCGTACGCTAGTCTTAAATATCCGCAAAATTGCAAGGTGTGTGGCAAACAGTATAACAATTACTACAATGTGCTACGACACATGGAGTCGAAGCATCCATTCCAACTGCCGGATACATATCGTTGTGAACCGTGTGACATTGGCTATCCACGGCAAACTGAATTGCGAGAGCATATGTTCAAAATGCATGGCGTCACGATGCCCAAAATCAAACGAGAATCGTTTACGTGTCGCATATGTTTGATGACATTCGATAACAAAGACGTATGGATCGAACATCAAGCTGTCAATCATTCGCAGTTCTACTGCAGCCAGTGTGACATGGAAACGGAAAGTAAGGAGGAACTTGAAGCCCACTTGGAAACCCATACAAAGTTGAAAATGTTTACTTGCACCGTGTGTTATCATTCTTTCCACACGGAAAGAGGATTAGAAACTCATTTGGCCGTCATGcatcaaatgaaaaaagaagATATGCCCGAAGCAAACGGCACCACCAAAATCGAGGAAGGAATGGACATTGACGGTGAATTCAACTTAAATGACGACGACGATGACGAAGGAGCTCTGGAAATTGCGGCGGATGTCCATGTGAATGGTGAAACCGAAGGTGACTTTGAGAATGGGACTTTCGACGATGACTATGAAGATGATGACGGAAATACGGCGGACAACGATGAAACAATAGAAAATCCAGCGAAACGAATGAAGTTGAAGGTTGAGACCGAAGATCCCGAAATTGCTAATTTAATCTCATGTCCACTATGCCCGGAAAGGTTTAACGGCAAGATTGCACTTTCAAATCATATGCGCAGCCATGCGGCTGCGATGCCACAGCAGCTTTACGGCAATGCTGGCAAACTTAACATTGTTAAACGCACCGGCCACGTAAGCAATCGAATGAGATGCCGAATATGCCAAAAACGAATTCATACGAAAATCGGATTCAAGCGTCATATGTTGGTGGTGCATCAAGTGCGCGATTGTGTCTTcattaaatgtaaaatttgtccAGCAGAATTCAGCAATGACAAAGGCCTCAAAGTGCATATGTTCCGTACGCATAACGTTACCGTTCAACAAATGCAAAACGACCCATCGTTACGATCAACGCCAAATAAAGAATCTACAACTGGTTCCAATTTACCAAAGATTTTACCGAAAATTGCACCCAAACTTATGTTCGAATGTGACATTTGTCATACGGTTTACAGAAATCATGAGCAACTTTCATCGCATCGAAGTGTCGTACATGGGGCTTCTACTCCAGCGTTGAATAATACCAACGAAAATTTAGACGTCGAAGACATCCAGGAACCCATATTGCCGGTTCCGGAGGCCTGGTGGCAATGTCGATACTGTGACGAAACATTCAATGCTAGCAAAAAGCTTACAATTCACATGAACAGCCACGAAGAGCACGACAACACTGATAACACATGTAAAGATTGTGGCAATGTTTACTGCTCGCGAAAGTCGCTGTGGGTGCACCGGCACAAAAAGCATCCTCGCTTACCAAATCCGTCGACGTGTGAACTATGCGCGAAAGTATTCTTCGATAAAACTGAACTGTACTACCATTTGAAGACCCACTCCAACGACGACGTTTATTCACAATTGCAGGAATTGCACCAAGAATTGGAAAATGATCCGACCGTCAAGATAGAAAATACACAGCCATCGAACTATGGTGGCACTGAAGAAGATTTGAACTGCCATATCTGCGGACAAAGATTCCATGATAAACGAGTGTTGAGCAAACATCTGCGATCACACGAAACAGACAATAGTGCTCTACATACGATGCTGGATGTAGATGAAGAAAATGGATCTGATTACAGTTATCCGTCATACCAAGGACAAATGGTAGACGGTCAATTTGCATGCGACATGTGTCCAAAGACATTTCCACTAATCAATGCACTTAAAGTCCATCGCGGTTGGCATTTCCGATCACCTGACGGTCGTCAAGTCACCGACCCGACTAATATTTGGCAGCCTGACGTACCtcaaagtaaatttaaaagaacCAAAGCAGCTAATCCTCCTACCTGTCCCTATTGCAATTCGACATTTGCCAGTGGAAATAATTTGCGACGTCACATCGTTGAAGTACATAAACGCAACGAGGCTAAAATGATGAGAGAAAATGGAACAGTTAGCGAGACAGTGTTCATCGAAAAAGAATTGGAATGTCAGTTGTGTGCAATTACATTCAGCAATCGTCCGGAATGGGTCGACCATAAAATCAACCATGCGAGAACGATGAAACCATCCACCACATTCGAATGGGGATGCGAAATTTGCGGCAAAGTATTTACGAGAAAGGAACGATTACTCGCACATATGGTCATTCATTTGAGCGGTAAAGACGAAGGCAGCGTTCATTCGGCCGATCAAAGTGAAATTGGCGGCGAAAATTCACGCAGTTCAATGTCGTCGCAATCTCATTCACAACAGTCACAAGAATCGTCTTCGATAAATCaacgaattcaacaaattcatcAGCAACAATTGATGAAACAGCAACATCCATTAGCCACACATTCGCAAAATATTAAACCGGAAGAACAGAGTGAGCCAGAAGAAGACGATGAAGTAGAAGTGGAAGTGGAAGAGGAAGTTGAGGAGGAAGATGACGAAATAGAAGAAGAACAACCACAAGCAATGCCCGAAGCTGCCGCATATTCTTGTGACTTATGCCAAGTGTTTTTCCGCACCGCCAAAGAGCTACGACGTCATGTAACAAGCCACATCATAAATGGACCAGAAACATCTCAATCAGCCCCCGACTCAGATCGCAATCAGCAGAATCTGTTGTTGGATGGTTTCAAATGCCGTCTTTGCGGATCAAGCAGTGCTTCGCATATGGGAATGATTCAATGCATGGAAAATCATAAAACACCCACGAGCCTGCGATGTGGTAAATGTCAATTATATTTCTCAAGCGAGCAACAAGTGGTGGATCACGAGTCATTATGCCATCCACAAAGCTTTGAATGA
- Protein Sequence
- MTESLVRRGGCRLCLAPDSECVPIFATAAADKEPLSSKIQACVNIKIYQGDRLSSRVCHACISYLNSWQSFKNRCYAAQKKQRGMLDTFLAKERARIKSASQQQNPQQTPPSANSQRQIDSYRHQLEQQRILKDALSQPSGSSANKNAQNNIDVSFIKSEPVDDMQNETGVDDDEDVDPSQFLARDNDDGDELATEEEGGGGPPILTSLGLTHINHVNPYSFLSTELGNEVQSETETSGNATTFTLANFRRPGSQPCCTVCNMKFSNRANARRHERNIHGIKADILTSTPHAPIRPIQQMHTVMRPIMRPIMRTMQKKKKVIPPIVYDYTKPELYREFLTDSKLYFIKRHIDFLEQYQNMRCTCCNRDFPTYKTFMVHMRKRYDTLSRNLCFKCLKQFQSKALFVAHLKKKNCLNLYKVYCADDTVSKEPLPPIQTRVGTKEIIANKVYGCKLCSKTFRLKMDFRGHVYEAHGDVQKKETIGPECGFCKNVFEDASVRRRHYNNMECIVFLICGTCDEKFDNLSAYIDHVYAEHLKPNPDGSIPPMPTDAMSSSEFNSSNDQDPTSPSLQSYASLKYPQNCKVCGKQYNNYYNVLRHMESKHPFQLPDTYRCEPCDIGYPRQTELREHMFKMHGVTMPKIKRESFTCRICLMTFDNKDVWIEHQAVNHSQFYCSQCDMETESKEELEAHLETHTKLKMFTCTVCYHSFHTERGLETHLAVMHQMKKEDMPEANGTTKIEEGMDIDGEFNLNDDDDDEGALEIAADVHVNGETEGDFENGTFDDDYEDDDGNTADNDETIENPAKRMKLKVETEDPEIANLISCPLCPERFNGKIALSNHMRSHAAAMPQQLYGNAGKLNIVKRTGHVSNRMRCRICQKRIHTKIGFKRHMLVVHQVRDCVFIKCKICPAEFSNDKGLKVHMFRTHNVTVQQMQNDPSLRSTPNKESTTGSNLPKILPKIAPKLMFECDICHTVYRNHEQLSSHRSVVHGASTPALNNTNENLDVEDIQEPILPVPEAWWQCRYCDETFNASKKLTIHMNSHEEHDNTDNTCKDCGNVYCSRKSLWVHRHKKHPRLPNPSTCELCAKVFFDKTELYYHLKTHSNDDVYSQLQELHQELENDPTVKIENTQPSNYGGTEEDLNCHICGQRFHDKRVLSKHLRSHETDNSALHTMLDVDEENGSDYSYPSYQGQMVDGQFACDMCPKTFPLINALKVHRGWHFRSPDGRQVTDPTNIWQPDVPQSKFKRTKAANPPTCPYCNSTFASGNNLRRHIVEVHKRNEAKMMRENGTVSETVFIEKELECQLCAITFSNRPEWVDHKINHARTMKPSTTFEWGCEICGKVFTRKERLLAHMVIHLSGKDEGSVHSADQSEIGGENSRSSMSSQSHSQQSQESSSINQRIQQIHQQQLMKQQHPLATHSQNIKPEEQSEPEEDDEVEVEVEEEVEEEDDEIEEEQPQAMPEAAAYSCDLCQVFFRTAKELRRHVTSHIINGPETSQSAPDSDRNQQNLLLDGFKCRLCGSSSASHMGMIQCMENHKTPTSLRCGKCQLYFSSEQQVVDHESLCHPQSFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00245663;
- 90% Identity
- -
- 80% Identity
- -