Basic Information

Insect: Pseudolycoriella hygida
Gene Symbol: SMARCC2
Assembly: GCA_029228625.1
Location: WJQU01002440.1:47984-50998[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 5 1.2e+04 -1.9 0.0 33 43 200 210 197 212 0.88

2 2 1.2e-13 3e-10 41.7 0.2 3 44 645 686 643 688 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	5	1.2e+04	-1.9	0.0	33	43	200	210	197	212	0.88
2	2	1.2e-13	3e-10	41.7	0.2	3	44	645	686	643	688	0.95

Sequence Information

Coding Sequence: ATGGTATCACTGGGCCCCAAGAAGGATGGAGGACCGAACATCGAGTTTTTCCAATCACCGGAATCGATGCAAGGTTTCGAACAAATACGTTCTTGGTTgacgaaaaattgtaaaaagTATATCCAAACCGATCCACCAACGAAGGAGTCTTTGTGCCAGCTAATTATTCAGTTCATCCAGTACCAAGAaacgaaattcggaaaaaatgcTACCGAACATCTTCTCACCAGATTGCCGATGCGATGTTTTCTGGATTTCAAACCCGGCGGTAGCCTTTGTCATATTTTCGCGAACATGTACCGCTACAAGTCTGAACAAAGGTGGCGTAAATTCGACTTCAGCATGGCCAAGAATCCTATGCGAAAGGACCCGAACATTCAAATGTTAATGGAAATTGAAACGGCTTTGATCGAAGCGGAATGCTTTAGAATGCCTGTCGTCTATGTGCGACCGGACGTTGAGAAAACATTGGCCAGTAAAGTGAAGTCAATAATAACGGATCATCAAGGTGAAATTACGGAGGATGAAGAGGAAGCGTCACACATTGTTTGTCCGATTGTTGAGCCACTTCCTGAAGATTTTGCGAGACCAACATTTCGTCGTGGTAATCATATCATGATCCATTGGTACTATTTCCCTGAGTCCTATGATTCGTGGGTTGCTAATACATTCGATTTGCCCGACAACATTCCTGAGAATCCAGCGTCACCCGAAAATCGGTGGAGAGTATCCGCTTCTTGGGTTTTAGACTTGGATCAGTATAATGAGTGGATGGCTGAAGAAGATTACGAAGTAGACGAGAAAGGTGGTAAGAAAGTTCATAAGTTGCGATTGTCTGTGGAAGAATTGATGCCGATTGGACCGGATGATAAGAGAAAGCCCGTTGCTGGAGGTAGCAAACAGAAACGAAAGCGTTCCCCTTCTCCTCCGCCGCCGAAAGGAGCAAGCAAAAGAAAGAGTGGTAGGTCACCAGCTGTCTTTCAACGTAAAGGACGCAGTGGTGAAGGCGATGATGACGAAGATTTGACCCGTGACATGGAAGATCCGACACCCGAACCAAACATTACTGAGGTGACGAAACCACCAGCGACCCCGTTGACTGCGGCAAGTCCTGCCACTCCACAGTCTGCTAAACAAAGAGACACAGATATGTTGCCAATTAAAGGTGGAACTGTCACCGATCTAGACGAGGATATGGAACGTACAGGTGGTGAAGATTCACAAACGGCAAAAACAAGTGAAAATAGCAACACACAGGAATTCCCACCAAATAAAGATGACTTGGAGGATAATGTTACCGAACAAACGCATCACATTATCGTACCATCGTATTCGGCGTGGTTCGATTACAATTCCATACATGTCATCGAAAAGCGCGCAATGCCCGAATTCTTCAACGggaaaaataaatcgaaaactcCGGAGATTTTTATGGCATACCGAAATTTTATGATCGATACGTATCGCTTGAATCCCACGGAGTATTTGACCAGTACGGCATGTCGTCGCAACTTAGCTGGTGATGTTTGCGCAATAATGCGAGTGCATGCATTTCTGGAGCAGTGGGGACTAATCAATTACCAAATTGATGCTGAATCTCGGCCAACCGCAATGGGCCCACCACCAACTTCCCACTTCCACATTCTAAGCGACACACCATCCGGATTACAACCAGTTAATCCACCGAAAACCACTCAACCATCCGCTGCCAAAGCTTTATTCGATttggataaaaataaaaaagaaaaggaTACGGATGCTTCTCCAGCTGGGGCGGCGTCTGGGTCACAATCAGCCATTCCAGCGACTTCACCAACTATCGTTAAAACAGAATCAACCGTTGAGGCGAACGGTCAATTTGGTTTAAGACTTGATCAATACGCCAAGAAACCATCGgcattgaaaaataaaacagcgGCTGGTATGTCACGCGAATGGTCCGAGCAGGAAACTTTATTGCTGTTAGAAGGTCTTGAGATATACCGTGACGATTGGAACAAAGTGTGTGAACACGTTGGGACCAGAACTCAGGATGAATGTATTTTGCATTTCTTACGTTTACCAATCGAGGATCCATATCTGGAAGACGACAGTGGATATTTGGGACCATTGGCTTATCAACCGATTCCGTTCAGTAAATCTGGCAATCCAATCATGTCCACTGTAGCATTTCTAGCATCGATCGTTGACCCACGAATTGCAGCTTCTGCTGCAAAAGCAGCTATGGAAGAATTCGCAACGATTCGAGAAGAAGTACCACCAGGTATTTACTACGCACATTATAAAAACGTTGAAAAACTTGCAGTTCATGGAAAATTTGTTCCGAATGCAGGATTAGACATCAGTGGCATAGCTGGCACCGGATCCGGTAAAGAAGACGAAGATCATAAGCCCCCCATGGACGAAGAAATGAAAGATTTGTCTAAGAAAGATGGAGTTCTTCCTATCGTTCCACTCTTACCAATGTAA
Protein Sequence: MVSLGPKKDGGPNIEFFQSPESMQGFEQIRSWLTKNCKKYIQTDPPTKESLCQLIIQFIQYQETKFGKNATEHLLTRLPMRCFLDFKPGGSLCHIFANMYRYKSEQRWRKFDFSMAKNPMRKDPNIQMLMEIETALIEAECFRMPVVYVRPDVEKTLASKVKSIITDHQGEITEDEEEASHIVCPIVEPLPEDFARPTFRRGNHIMIHWYYFPESYDSWVANTFDLPDNIPENPASPENRWRVSASWVLDLDQYNEWMAEEDYEVDEKGGKKVHKLRLSVEELMPIGPDDKRKPVAGGSKQKRKRSPSPPPPKGASKRKSGRSPAVFQRKGRSGEGDDDEDLTRDMEDPTPEPNITEVTKPPATPLTAASPATPQSAKQRDTDMLPIKGGTVTDLDEDMERTGGEDSQTAKTSENSNTQEFPPNKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNGKNKSKTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTAMGPPPTSHFHILSDTPSGLQPVNPPKTTQPSAAKALFDLDKNKKEKDTDASPAGAASGSQSAIPATSPTIVKTESTVEANGQFGLRLDQYAKKPSALKNKTAAGMSREWSEQETLLLLEGLEIYRDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDSGYLGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRIAASAAKAAMEEFATIREEVPPGIYYAHYKNVEKLAVHGKFVPNAGLDISGIAGTGSGKEDEDHKPPMDEEMKDLSKKDGVLPIVPLLPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00440244; iTF_00246261;
90% Identity: iTF_00246261;
80% Identity: -