Phyg002574.1
Basic Information
- Insect
- Pseudolycoriella hygida
- Gene Symbol
- bab1
- Assembly
- GCA_029228625.1
- Location
- CM055403.1:25592748-25594656[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-13 8e-10 39.9 0.0 1 45 347 391 347 391 0.93 2 2 0.49 9.6e+02 1.2 0.8 4 20 502 517 501 517 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGACAAGAGGGACAAACATATTGCTTGCGTTGGAACAACCACAAATCTAATTTGGTTGAAATTCTGGACGTTTTAATTCATAAAGAGTGTTACGTTGACTGTACCATTTATGTAGATGGACAAGAACAGTTCAAAGCTCATCGAGTAGTCCTAGCAGCTAATTCACcatattttcaatcaattctACAAGACGTTCCCATGGACCATTGTAGTATTTTAGTTCCCGGTGTGCAGCCATTTGAAATGCGCGCACTTATCGAGTATATGTACACTGGAGAAGTAAATGTCACCCAATCACAAATAGCTCGCATAATGATAATCGCCAAACAATTAGAGGTCAAAGGACTGTACGACATGACAGATCTCAAAGACAAATTCGACAAAATTGACGATTCGCAGCATTATACACATAACAATCACAAACAAAACGACATACAATCATCACCAATCATATCAACCTCAACGAACATAGCGACAGCTCAAAGCAGTAGTTCATCGCCGCCATACAACTATAAGCAACCATATTCGAATCTATTCTCTCAAGGTTCGGCGGGACTGAGTCAGACCGAACGTTCACATCCATGGTCAATGTCACCACATTTGTCATCTGGTTTACATCCACCTCCTCACCTACAAAATGCGGCTGTCGCTATGTTAAGTTCAGTATATGACTCAAGCTCTGATATGAATCCACTGAAAAGAAAGAAACTGCAATCGATCTCCAGTATGCTGATGTCCAACGATACACCAATTTTGCGAAACGTTTTAGCCCAACCGAATGCAGCCGATTCATCCCAACCAGTTCCCCTGGTCGGTCCGTCTAGTAATAGTGAACGGAGTGGCCGGCAAAGTACACATTCAAATGGAACCGATCATTCAGATAAGCAGAAACATAAGTACGATGACCATCCACATTCGCCATACACAGACAAATCGTTTGAAGAAGATAACTTGGAGCCACATCCTAATGAATCACGGATTGCACCTTATATACCACAACAGAAACCCGAGTGGAAACGCTACAAACAATACACAAGGGGTGATATCTTATCTGCCATAGAGTGCGTTCGCAACGGAATGAGTGCCTTACAAGCGTCACGTAAGTATGGCGTACCTTCGCGAACCCTTTACGATaaagtcaaaaagttgggtATCACAACTGGTCGACCAATGAATCGAACAATGAAACGAAGCAACAGTAATGGTGGAAGTCCATCAGCACCGTTTCCATACGGTTTGAGCGGTTGCGCTACGAGCAGTCCATATTCGGTGAACGACACGCATCACAGTTATTCGCATGGAGGACACAATGCGACTCAGTCGAGTCACCACAACGATTCTGGCGACAGGGACATTGATTCGCGTGAACGTGACCATCATATTCCACCTTCTATATCACATCCAGCGGCAGCATTGTTGGACGCCACATTTTTACAACAAGCGATTGAAGCTCGTGGTGGTGGTGATATTACTGGAAGAGAAGCATTGCATGCAATGGCATTAGCTGCGGCGGCCCATGCGGCCGTAAATGGTATATCGACAAGTCCCGGTACACATGGCACAGCGCGATCACCAAGTCCAAGTATTTTAATGAAATACATGCGCGTTGCAAGTCCCAATAATCAGAATACTGCAGAACAACGAGACAACGATCAAGAACATTCACCAGCTGTTGACGATGAAGTGGAAGACTTGTCAATagctaaaaaaaatgatgaaatttgtGCACCACAACAGCATGGGGTGATTGTACCGCCAATGACGAAAGTAGCACCACATTTCAATGTTGATTTGATCAAACGAGAAACAACAGCTGACGATGATCCTCATAATTAG
- Protein Sequence
- MGGQEGQTYCLRWNNHKSNLVEILDVLIHKECYVDCTIYVDGQEQFKAHRVVLAANSPYFQSILQDVPMDHCSILVPGVQPFEMRALIEYMYTGEVNVTQSQIARIMIIAKQLEVKGLYDMTDLKDKFDKIDDSQHYTHNNHKQNDIQSSPIISTSTNIATAQSSSSSPPYNYKQPYSNLFSQGSAGLSQTERSHPWSMSPHLSSGLHPPPHLQNAAVAMLSSVYDSSSDMNPLKRKKLQSISSMLMSNDTPILRNVLAQPNAADSSQPVPLVGPSSNSERSGRQSTHSNGTDHSDKQKHKYDDHPHSPYTDKSFEEDNLEPHPNESRIAPYIPQQKPEWKRYKQYTRGDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTMKRSNSNGGSPSAPFPYGLSGCATSSPYSVNDTHHSYSHGGHNATQSSHHNDSGDRDIDSRERDHHIPPSISHPAAALLDATFLQQAIEARGGGDITGREALHAMALAAAAHAAVNGISTSPGTHGTARSPSPSILMKYMRVASPNNQNTAEQRDNDQEHSPAVDDEVEDLSIAKKNDEICAPQQHGVIVPPMTKVAPHFNVDLIKRETTADDDPHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01265956; iTF_00245325; iTF_00246436; iTF_00246254; iTF_00245534;
- 90% Identity
- iTF_01265956;
- 80% Identity
- iTF_01265956;