Phyg003267.1
Basic Information
- Insect
- Pseudolycoriella hygida
- Gene Symbol
- dl
- Assembly
- GCA_029228625.1
- Location
- CM055403.1:35257843-35262890[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.3e-42 7.9e-38 131.7 0.2 2 168 9 179 8 180 0.92 2 3 0.99 9.3e+03 -2.0 0.4 99 137 341 379 333 390 0.71 3 3 2.5 2.4e+04 -3.3 0.2 117 146 475 503 460 515 0.46
Sequence Information
- Coding Sequence
- ATGATGCAGTCAAAGGGCGAAATTGTAATCGTCGAAGAACCACagggttcaaaaaaatttcgatactCTAGAGAGCCTCCAGCCGGTGAAATTCAGGGGGTAAATACCACACGCGAAAATCCAACACACCCTTCtatcaaaattataaattataccGGAGAGGCATCGATTTATGTTTCTTGTGTAAGGAAGGATGAGCCTTATGCACCACACCCTCACATACTTACTGGAAAAGATTGTGCCAACGGAGTTTGTCACATCAGTAGATTCTTTACGAATGCCAATAACCCGacgattctttcattttctggtCTACGAATTTGCTGTACGAAAAAGGACGAAATAGAAACAAGGCTACGAGATCGCAGAAACTTCAGAGTCAATCCTTTCAACGTACCCAACAGTGTCATTGACGACGTTAAAAGTATCAACATGCATGGCTTTCGATTGTGTTTTCAAGCAATCATCCGGCCCGATCCTGAGAAGCCAAATCACAAGATTCAATTTCGCCCGAAAGTATCCCAACCTATTATGAATTCAGCAGTCTACAACGAGTTGAGAATTCGTAATATGTGCGACCCATCTAGTCCATCATCCGGAGGCAAGAAGATCTTATTGTTCTGTAATAAAATCTCTCGAGACGACATTCGGATACGATTCTTTGAAGAATCTGTAGATAAGCAGGAGATTTGGAGTGAATGGGTTCACTCTCAAAATATTTATAATGACAACGGAATCGCATTTCTAACTCCTGCGTACAGACGAATCAACATAGAAACGGTGCACGACGTATTCATGGAATTAGTGAGGCCGTCAGACAACGCAAGAAGTAACCCAGTCAGATTCAGATATATCCCAACGAACAACATAAATATGACCACGACGAGAaagcaaaataaaattgatgatctAAAAGATTGGTTCGAATGTTTCGATACAATGCAGGAAGACGCTCAGCATCAGCAGCCTTCAACATCCGGTTTCCAAATTAAACGACAACTTGATGAAATGACGCTACTATTACATTCCAAAGATCGACAGATTGAAGAACTTCTGAAACAGCAGGAAACGTTACAGTTTAATTTCGTCAAACAACAGGAACTAATAAAACATCTACAAGGTAAAATAGATCTAACGACGCAGGAACAATACGAACGGAGTGAGAATCTCCCAAAGCCAAATGTACAACCGAGAAATCAAATACAGGAACAGATGGAAATTCCGCAGCTTTATAATTTGGAAAATCCAGGTCCTTCGAGAGTCGTAGAACAAATacttcaaaatcaaaattcataCCAGGATCCTCAACAAAACTTTTCGAATATGTCAATAAGTTTCGATGAAGTCTCCTCTACAGATGACCATTTTTTGTCCGATTTGTGCAGACAAGAGATAGACAAAATGGTGCAAGGGCTGGAACTAACAGAAAATCAAGAAGAAAATAATAGACAACAGAGTTATCAAACACATGAGCCAATACATGAACTGAGAGTGAATTTTAAtagacaacagagtcatcaaacacaTGTACAGGGGCTTATTCCGCAGCTCTACAATTTGGTAAACCCAGGTCCTTCATCATCAGTCATATTACAAAGTGTACATCTACAACATCAAAGCCCATATTTAGATACTGAATCGAACTCTTCAAAGATTATGCCTAAAATCTACCTCTAA
- Protein Sequence
- MMQSKGEIVIVEEPQGSKKFRYSREPPAGEIQGVNTTRENPTHPSIKIINYTGEASIYVSCVRKDEPYAPHPHILTGKDCANGVCHISRFFTNANNPTILSFSGLRICCTKKDEIETRLRDRRNFRVNPFNVPNSVIDDVKSINMHGFRLCFQAIIRPDPEKPNHKIQFRPKVSQPIMNSAVYNELRIRNMCDPSSPSSGGKKILLFCNKISRDDIRIRFFEESVDKQEIWSEWVHSQNIYNDNGIAFLTPAYRRINIETVHDVFMELVRPSDNARSNPVRFRYIPTNNINMTTTRKQNKIDDLKDWFECFDTMQEDAQHQQPSTSGFQIKRQLDEMTLLLHSKDRQIEELLKQQETLQFNFVKQQELIKHLQGKIDLTTQEQYERSENLPKPNVQPRNQIQEQMEIPQLYNLENPGPSRVVEQILQNQNSYQDPQQNFSNMSISFDEVSSTDDHFLSDLCRQEIDKMVQGLELTENQEENNRQQSYQTHEPIHELRVNFNRQQSHQTHVQGLIPQLYNLVNPGPSSSVILQSVHLQHQSPYLDTESNSSKIMPKIYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -