Basic Information

Insect: Pseudoips prasinana
Gene Symbol: -
Assembly: GCA_951640165.1
Location: OX621253.1:24473534-24490138[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.083 43 6.2 1.1 18 43 173 194 163 195 0.83

2 14 0.0021 1.1 11.3 1.6 14 40 225 248 213 251 0.82

3 14 0.01 5.5 9.1 1.3 14 40 342 365 336 368 0.83

4 14 0.0016 0.85 11.7 2.6 14 40 440 463 434 466 0.84

5 14 0.0018 0.96 11.5 1.6 14 40 538 561 531 564 0.84

6 14 0.0097 5.1 9.2 0.3 14 39 593 615 586 625 0.84

7 14 0.0018 0.94 11.5 1.6 14 40 691 714 684 717 0.84

8 14 0.0018 0.96 11.5 1.6 14 40 789 812 782 815 0.84

9 14 0.012 6.4 8.9 0.5 14 39 844 866 837 872 0.83

10 14 0.0018 0.96 11.5 1.6 14 40 942 965 935 968 0.84

11 14 0.00086 0.45 12.5 0.6 14 40 1040 1063 1033 1066 0.84

12 14 3.1 1.6e+03 1.2 0.4 16 38 1070 1093 1064 1093 0.74

13 14 4.3 2.3e+03 0.7 0.6 18 35 1128 1142 1113 1150 0.76

14 14 0.0011 0.59 12.2 3.8 13 43 1206 1233 1187 1234 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.083	43	6.2	1.1	18	43	173	194	163	195	0.83
2	14	0.0021	1.1	11.3	1.6	14	40	225	248	213	251	0.82
3	14	0.01	5.5	9.1	1.3	14	40	342	365	336	368	0.83
4	14	0.0016	0.85	11.7	2.6	14	40	440	463	434	466	0.84
5	14	0.0018	0.96	11.5	1.6	14	40	538	561	531	564	0.84
6	14	0.0097	5.1	9.2	0.3	14	39	593	615	586	625	0.84
7	14	0.0018	0.94	11.5	1.6	14	40	691	714	684	717	0.84
8	14	0.0018	0.96	11.5	1.6	14	40	789	812	782	815	0.84
9	14	0.012	6.4	8.9	0.5	14	39	844	866	837	872	0.83
10	14	0.0018	0.96	11.5	1.6	14	40	942	965	935	968	0.84
11	14	0.00086	0.45	12.5	0.6	14	40	1040	1063	1033	1066	0.84
12	14	3.1	1.6e+03	1.2	0.4	16	38	1070	1093	1064	1093	0.74
13	14	4.3	2.3e+03	0.7	0.6	18	35	1128	1142	1113	1150	0.76
14	14	0.0011	0.59	12.2	3.8	13	43	1206	1233	1187	1234	0.89

Sequence Information

Coding Sequence: ATGTTGTCTAATTGcactaaattaaagCCACACATAGAAGATGGATTACCGCGTTTAATTTGCAAAGAATGTAGCCGGCAACTAAAACGTACGTACGCCTTCAATATACAATGCGAGGAAAgcgaaaaacaattaaaatacctACTAGAACATCCAGAATTGTATAACCTCGGGAATAATGAGATAAAATGTAGCAGTGACGATATAAAATCTGAGGAAATTAGCAGTACTGTGAAAGAAGAAGATAGTGAATTGAATGGAGGAGAAACCTTGGATGAGAGGGTCAATGAACCAGAAGACATTAAACTTGAACCAGATCTGAATGGTGATGGTGATGCAAATGACAGCTGCTGGGATGCTGAGGATGATAATGTATTACTGGAAGAGCTCAAGATAAAGAAAGCAGAGGAACTTAGTGAATGTAATGAAGAGaaaccaaataaaaagaaaagaggtagaaagaaaaaagTTTACCTTGAAGGTGAACGTCCAGTGCCAGAGAGCAAGTTACCGCACCAGTGTGATATCTGTGGCAAGTTCCTGAGCACTAAGAGCAACCTTAAGGCGCACAAACGCTGTCATTCGGATCTACGACCCTATAGCTGCACCGAGTGTCCTGCTACGTTTAAAGGACACAGTGCACTATTCCAACACAAGAAGATGCATACAGGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGCAGAAGAAGCTCCACACAAGCGAGACACCGTATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCTTCAACCATATACGGATGCACAAAGGTTAGTACAATCTCTCTACAGCAGAAGAAGCTCCACACAAGCGAGACACCGTATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCTTCAACCATATACGGATGCACAAAGGTTAGTACAATCTCTCTACAGCAGAAGAAGCTCCACACAAGCGAGACACCGTATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCTTCAACCATATACGGATGCACAAAGTTCAGCCGCCGCACTGGACTCTTCAACCATATACGGATGCACAAAGGATAGTACAATCTCTCTACAGCAGAAGAAGCTCCACACAAGCGAGACACCGTATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACAATCTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCTCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCTCCACACTAGCCAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTGAGTACACACTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTGAGTACACACTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCTTCAACCATATGGGGATGCACAAAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCAGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCAGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCTCCACACTAGCCAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTGAGTACACACTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTGAGTACACACTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCTTCAACCATATGGGGATGCACAAAGTTCAGCCGCCGCACTGGACTCTTCAACCATATGGGGATGCACAAAGGTTAGTACAATCTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCTGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCAGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGTTAGTACACACTCTCTACAGCAGAAGAAGCAGCACACTAGCGAGACACCATATCACTGCGAGTACTGCCCCAAGCAGTTCAGCCGCCGCACTGGACTCATCAACCATATACGGATGCACAAAGGGGAAAAACAATACAGTTGCGAGATATGCTTCAAGACATTTGTCCAGAGCGCGCAGCTGTCGATACACATGAAGAGGCACAAAGGAGACAAGCCATATCTATGTCAAGTTTGTGGGAAAGGGTTTCCAATAAAAGCAGAGCTGAAGGTGCACCAGCGGATCCACAACGGGGAGAAGCCTTACTCCTGTCACCTGTGCACGAAGACCTTCGCGACCTCCGGCAACTTGTCCATACATGTTAGAATACATAACCAAGAAATTAGATACAACTGCAAAGAATGTCAACGCGGCTTCGTAACCTGCAGCGCGTACAACGTACACTTAAAGCGTCACAAAGGACAACGCGACTATCACTGCGAATGTGGCAAGACATTCTACACTTCATCAGCTCTCAAACAGCACAAAGTCGTCCATACTGGCGAGAAAAAGTATCAATGCAAAATATGTGACCGAAAGTTCTCTCAAACTTCCCACCTCAGTAGACATTTTAAGAGAGACCACGCTAAACCGAACGCCCCTGTGCCTTCCTCAGATCAGTATAAAGTAGTCCTAGATGTTAATAAAGACGTTATTTGTATAATAGATAAGGTGATCTCAGTTGCGAATACTAACCCGGGTGTGAAGTGTGAAGGGTCATAG
Protein Sequence: MLSNCTKLKPHIEDGLPRLICKECSRQLKRTYAFNIQCEESEKQLKYLLEHPELYNLGNNEIKCSSDDIKSEEISSTVKEEDSELNGGETLDERVNEPEDIKLEPDLNGDGDANDSCWDAEDDNVLLEELKIKKAEELSECNEEKPNKKKRGRKKKVYLEGERPVPESKLPHQCDICGKFLSTKSNLKAHKRCHSDLRPYSCTECPATFKGHSALFQHKKMHTGETPYHCEYCPKQFSRRTGLINHIRMHKAEEAPHKRDTVSLRVLPQAVQPPHWTLQPYTDAQRLVQSLYSRRSSTQARHRITASTAPSSSAAALDSSTIYGCTKVSTISLQQKKLHTSETPYHCEYCPKQFSRRTGLFNHIRMHKVQPPHWTLQPYTDAQRIVQSLYSRRSSTQARHRITASTAPSSSAAALDSSTIYGCTKVSTISLQQKKLHTSETPYHCEYCSKQFSRRTGLINHIRMHKVQPPHWTHQPYTDAQRLVHTLYSRRSSTLARHHITASTAPSSSAAALDSSTIYGCTKVSTHSLQQKKLHTSETPYHCEYCPKQFSRRTGLINHIRMHKAAALDSSTIYGCTKVSTHSLQQKKLHTSETPYHCEYCPKQFSRRTGLFNHMGMHKVQPPHWTHQPYTDAQRLVHTLYSRRSSTLARHHITASTAPSSSAAALDSSTIYGCTKVSTHSLQQKKQHTSETPYHCEYCPKQFSRRTGLINHIRMHKVQPPHWTHQPYTDAQRLVHTLYSRRSSTLARHHITASTAPSSSAAALDSSTIYGCTKVSTHSLQQKKLHTSETPYHCEYCPKQFSRRTGLINHIRMHKAAALDSSTIYGCTKVSTHSLQQKKLHTSETPYHCEYCPKQFSRRTGLFNHMGMHKVQPPHWTLQPYGDAQRLVQSLYSRRSCTLARHHITASTAPSSSAAALDSSTIYGCTKVSTHSLQQKKLHTSETPYHCEYCPKQFSRRTGLINHIRMHKVQPPHWTHQPYTDAQRLVHTLYSRRSSTLARHHITASTAPSSSAAALDSSTIYGCTKVSTHSLQQKKQHTSETPYHCEYCPKQFSRRTGLINHIRMHKGEKQYSCEICFKTFVQSAQLSIHMKRHKGDKPYLCQVCGKGFPIKAELKVHQRIHNGEKPYSCHLCTKTFATSGNLSIHVRIHNQEIRYNCKECQRGFVTCSAYNVHLKRHKGQRDYHCECGKTFYTSSALKQHKVVHTGEKKYQCKICDRKFSQTSHLSRHFKRDHAKPNAPVPSSDQYKVVLDVNKDVICIIDKVISVANTNPGVKCEGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01265030;
90% Identity: iTF_01265030;
80% Identity: iTF_01265030;