Ppra061595.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- Baz2b_1
- Assembly
- GCA_951640165.1
- Location
- OX621263.1:10372816-10454318[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-11 1.5e-07 32.9 0.0 3 75 632 707 630 709 0.88
Sequence Information
- Coding Sequence
- ATGGACAAGGACGGCGGGGAGGGCGGGGAGGCGGCGGGGAAAGGGCCGCCGGACGGCCTGCTCGACGCCGCTGGCCTGTTTGGTGCGTACTGGGGCCGTGATGGCGCCGGTGCCGGTGGCGCGGCGGCTGCGCAGGCGCAGGCGCAAGCGCAAGCGGCGCTCTTTGGCTTCGGTTCCCGCTACCCCCCACCCACCACGCTTGGCGTCGCGGCTAACCAGGCCGCGTCGCTCGGGTTGCACCCTGCTACCAGTGCAGCTTGGTGGTCAATGGCGTCCCATCTCGCGGCACAGGATTACCTAGCGCGGCTGCAGGCCTCGGGGCTCAACTTCCCGCCCCTAGCCGACCCTTACGCAGCGCTTTCGGCGCTGTCCGGGGCGGGGCTGAAGCAGCCACCGAAGCCTGGGAAGTTGTCTAGTCGAAATGAGAGGTCAGGCAGAAGCAGTACATCTTCCAGTGCGTCCACGAAAGAGAAGAGTTCGTGTACCAGCAGCACCAACTCCCAAAACATGAGATCACAATATGGTCTGCCGAAAACGTCGTCTCCGTCCGCGATGCACCACTCCCAGTCACTGTCGAGCCTGGCGTCTCTCAACAGCCTGGTGTCTGCACCTCATCAGTCCAAGCCTAGCAGCAAACCTTCACCAGTCCCACCTCCTAGCAAGAAACCATCGTCGTCGTCTTCGTCATCGATGTCGAGCGGTAAAGGCAAGGAGCGGGAGTTGGCGCTGTTGCGCGGCGACCTGATGCTGGCACAGGCGGCGGCGCACGGCGCGTACCACGCTGCCGTCGCTGCGGCTGCTAAGGGGAAGAATATGTCACCGCTCTACCCGTTCGGTATGCCGGGCTCCGAGAAGGATCGGCATGCAGGCATCGATTCCCTTACCGGCCTACCGCACACTATTCTTAGTGATCCTTCATCAGTGCTGGGTGGGGTGCGCTTGCCGCCCGACACGGAGATCATTAAGTACACCTCGTCGCTCGCCGGGGGGCCCAAGGCTGGCAGCGGCACGACCCGGGGTCGCAAGAAGACGATATCTCTGGACCCTCCTCACGTGTCCGTGCACCCAGCAGACCGGTCGACCCCCCTACCTAGCAAAAGACCTAAGCTGGACGAGTATGGTAACTCTCGGTCATCAGTGGAAGTGATCCGCCTACCCAACAAGCCGGACGGCCGGCCCGGACACAACTCCCTGTCCGGCACGCCGCCGCCCAACCTATCCGACTATGCAGGTATATCTCGCGAACTGCTGCAGACGATAGCTAGTCAAAGCGGCGTCAGTTTGGCCGCGCTCGAGCGACAGCTGGCCGGTTCCACGGCTGCTGCCACAGattcAGGGTTAAACCTGAGCACAAAGTCCGGCGCAGAATCCCCGCTAGACCTCGGCGTGAAGTTAGGCTCTATGGAAGATGATGCGCCTCTCAACCTTTCCTTGAAACCTACGCCTGCGAGTTCGCAAGCATCAGACGCCCTATCTCGATTAACTTCATTGAGTAGTTCACTCAACGCATCCTCCAGTCACGACAGAATATCGCGGCGCAAGCCGGGCGCGCGGCCGCGGCGCGTGGCGCCCGACGCGCCGCACGCCGAGTGCCCGCGCCCGCGCTCCAGCGGCAGCGAGGACAGTGAATCAGTAGCAGGCTGGGCGGGCCGGGAAGGTAGGCCCCGAAACCTGGGCCGGGGCGTCAGCAAGCCCAAGAAGAATACTGTGGCCTCCCTGTTAGCGCAGTCCCGCGCTCTGGGCCTGAGGCCCGCGCTGGCGCACCAGTTACTTGCTGAGACTGATCTGGAAAAACTAAAAGCGTTGCTAGGCGACCAGGCGAGTACGGACTCTGAGTGTCCGTCCGACAGCTGTCCGTCGGACTCCGACGCCAGTGACACCAGCCGGCGACCTAACGACGCGCAACTTAGACTGCCACTAGCACTAGGTTGGAAACGCGTGACAGTAATCAAAGGCTTGTCACGCAACTGCAACATCAAGGGAGATGTCACGTACACACCGCCCGAGCCCCACGCCTCGCTCAGTATTAGATCTGCACAAGAATTGCATAATTTCCTGGAGTCGAATCCTTGTCCCCCGTTGTCGACGGACAACTTCAGTTTCAGTGCCCGCACCGTGCTGGGCGAGTACATGCAGCCCGGCGACCAGGGGGAGCCACTAGTCTACAACGAGAATGAAATTAATAAGAGGCTAGAAGAAGCCCGTGCACTGGCAGGCGGCGGCCGGCCCACCCCGCCGCCGCTGGACCGGCGCATGGAGCTGGCGCGCCTGCAGCAGGCCGCTCGCGATGCACGCCGGGACGCGTCCGCGCGCTCCCGAGACCAGGCCCGAATGGAGAGGTCAGAGAAGGCGGAACTAGCTAAGAGAGAAAAGGAAGCACGGAGTCAGCAACTACTCGAGCATATCAACAAAAATCGTACGCAGTTGACCATCGAGCCACTACCGTCGATACCCAAAACCGGTATCGACGAATGGAAAACACCAGACATAGTGATGGGACCAGCTACTAAGACGAATAAGGACCGCACTATGCCTCCAATAAGTCTCTCTCTAATCCCTGTCCCGGGACCAAAAGACACATCGAACTCTCCCATAAAAACTATGAAATTCGACCAATCCGGATGGAAGGAGGAAGTAGAGGAATATAACGCACTAGATAAAATGAAAGACTTTGCTGAAAAAGCAGCTTTTGACCTCCCCAAACGAAAAGACAAACAATATGATTTCACACTCATAAAATCAGCTGAAAAGCGATTAAAAACTCCAGACAAGGTGAACAACTTAGAAAAACTAATAGAATCCTATTCGAGAATAACAGAATTCATAAACGGCTGTGATTGGTCGAAGTTGCAAGGAGATAAAAAGACCGAGGATCCGAAATCCTTAGAACAAAAGTATCTAGACGCTAAAAATGAATTCATGTCTGAGAACTTGATGTTAATGCCTAAGGAAAATAACACAAAGTCTGTACTAAAAGAGGTCATAGATTTGAGTGAAGATGACGACAAGATACTGACggatattataactaaaaagataaataaaggtACTTTTAATGTCGGTAAAGATGGAGCGTTATCAATATCAGTCCATCCCCTTGGCTCTCAGGATGTGTACGGATTGGCTAAGAGAAGAAAACACGAGGAGATTGAGAAACAGAAGATCGAAGAACAGGTTAAGAGGCAGCAGGAAAGAGAAATAAAGCGTCAACAAGCAATCCTCCTCAAAGAACAGCAAAAGTATATAACTGAGGAACGCGAAAGAAGACGTCAGCACACTACATTTATCCGTCAGTTGGACTCCCGCAGAAGATGGGAAGACAGGGAAAGACGGAAACACCAGAACTTGTTGGACAGGCTCTTAGCTAAGGAGAAGAAGTTACAGCAGAGGAGAAAGGAGATGGAACTGCTATCCGAACTGAGACGGCCACAAGAAGACACGTCATTATCAGACCAGAAGCCACTGCCCACACTGAACAGAATCCCAGGACTGAAGCTCCCGGGCCAGGCTATGGCAGACATACTACAAGTGTATGAGTTCATACACAACTTTGGACAAACTCTAGGATTTGACATGGACGCAATCCCAACGCTGAACACGTTCCAAATGGCCCTAATGCCGGACTGCAGCGTGGAGGCTGAAGAAGAATTAGTGCAAGTCCTTACACAGCTACTAATTACAGCTATAGAGGACCCCGGAATCCCTCATCCTGGCCGCCACACCACCCTTCTAGGACATGCCATCCGTATGGGTGATATTACGCCCCACAATCTAAGCGAAGTGCTGCGGATATACCTGTACGCCAACGCTACCGGCGAGGTTAAAGCGCTTACTGGTTTGACAGCGGAGCGGGAACGGGAGCGTCGAGTGGCAGACCACCACCAAAGTGAAGCAGAAATGCAGAGCACATGCGCCAGTACAAAGAACGCTGCTTATTACGAACATCTGCATAGTAATGCTACCTACAAATTATCCGagtCACTGAGGGACAAGCCATTCTTAGCCCTCAATGCAACGACAAAAGCACGCATCCTAGCATACATTTGCGACGAGCTATTACAAAACAAAGGGGTGCTCAGACAAGTGGATGCATCGCTTGAACATCTAAATCAATTAAAGAAGGAACGATATCTCATGGATATGAAGATAAGAAAGGTTCGAGTGATGCACCAACGGAAGGTGCGCGCAGAACAAACAGAGAAGCAACAGGCTCTTGCTCTAGAACGAATGCAGAGGCTCGTGGAAGAGAGTTCAGTTAACATAAGAACATCGCCCCATTTGGACGATGAAAACCACCAAACCCCAGAAAAGTTAGAAACGCCTAAAAAAGACAAAGATTCATCACCTCACACCGATAACGAGGACAAACACGGCACTCCCTCCCCATACAAGGATACACAACCAACAGAAGAAAGCGACAAAGAATTATCGCCGTTAAAGGACCTGTCGaatagtatgaaaaataaagaaatgctGAATAATAACAAGGACGAGTGTTCTCCAGCAGATAACTCGAAGATTGATAAAGATAGTGTTATGGGAGACTGTGACGCGATATTGAGTGATTTGGAGAGTGAAGGCACGCAGCCAGAAGAGGATGAAGACAAAAATTTATCTTCGGAAGAAATGGCCCGAAAACTGGAGAAGTTACTAAAACTATCAGAACAACAGATATTACAAGTCTCAGCGGGCTCCCACGCATTGCGAGCTACTTGTTATGGACAAGACAGATATTGGCGGCGCTACTGGTCTTTAGGCAAATGCGGTGGTATATTTGTGGAAGCTATGGAGTCTGCCCAGCCCGAGATCATGAACTACCACGCCCATTTAGAGAACAACGCGCTGAGCGGGATTACGCCTAACgatgggaaaaagaaaaagaaagGTCAAAGAGAAAAAAAAGACTCCTTAGCTTCAGAGACTGAGAAACTCAACCCGGAAACAGACGCTCTCAAGAAAGAGGAGGCGCTCAAGAGCGAACTGGAATTAAAGAATATCAAGTCTGAACTCAACTTGAGCGACCACACTCAGATCATCAAGTACGAGCCCAATGTGAAGCATGGCGCTTGCAAAGTACAAGGTTCGTCCATCAAGATGGAGGAGAAGTACATACAACAGAAGCAGAACAATGAAGAAGAGGACATGTTGGACATCGAGGACTCTATCCCAACTGCATTCCTAGTCCAGaaACCTACGCACAAACCCTTATTCGCAACCCAAGCAGAGCCCATGGATAAACCCCAGGAGATCGTCAAAGTGGAAAACATAGTCAAAACAGAGAATGACCCAGAAGAAGAAGAGAATAAAGACCAATTAGTGAACAATCTAGAAGAATTACGCAAACTCGCTGAAGCTGTGTCTTCTCAACTAGATGCAGCGAAAAAAGCGGAGGCGGAAATTAAAGAGGAAAAGgaaaaaataaaacaagagcCTTTAGATTCAACCATCGCGCATCAGCAGCTGTACACTAAGATTCTCGAAGGAAAATGGTTCTCTATCCTAAGGCATGAGAGTTCATTTTTAAATAGCATCAATGAGATTGAGAAATCTAATAATCTACCGGAATATTGCGATAACGAACATACTTGTTCTGAAGTCATTTTATGTCAGGGTCACAAATGGGATGTATCAAACAACCTGCATTTATTAAACGACCCTAGCTTGTTTACATTGAATAGCATGGTGACGAGTGTACAAGTACCATCTAACAATGTGTACGCAGACTCTAGCTTGACCATGTCTGGCCTGGATCAGGATATGATAGATGCCAGCTGCAACAAAGATGGCGGATCTCCGGAAATGGAAGTAGAGGAGGAGAGCAAGGAACAGGACAACGATTTAGAAAAAGAGCTCCAAGCAGACGCATTGAAGCACGACCTAGCCACGCAGAAGGCTAAAGCCAACAGTCTCGTCAGCTTAGGTCTTCTGAACTTCAACGCTCTATCCACCTACGTGACGTGTGACAGTCCACCGCCCATTCAGATGTCTGCTGAGGAGTTAGAGCAGCTCGAACACTGCAAGCAACATGGGTTACCCAAGAAGGTGGAGGGTAACTTCGTGCCCAGGGAATTGAGatACGGGTGGTGGAGAATCACAGACGCTGATCAAGTGCGAACATTACTAGACACATTACACCTGCGCGGAGTGAGGGAGAGAGAACTACATTCTTCTTTGACAGTGCACTTGCCTACTGTCAATAATAAGCTTTACATAGAAAAGGGTGACATCCTATCGACGGAGCTGTGCGTGTCGCACGTGGACCGCGTCATCGCGCAGAGCGGCGGCTTCCCCGCGCCCGACGCGCCCAACTCGTACTCCGCACACACCGCCCGCCGGCTGGACCTGCAGATACTACATATGGTGGAACAACTCGAGGAGCGTGTAGCGGCCGCGTCCATGCAAGTGAAGGGCTGGCGCCCCAACCGCGTGGCCGACGCGCCCGCCGAGCCCGTGGCCCGCGCGCGACACAAGCTGCAGGCCCTAGAGGCACACATTGAACGGAGATACCTCAAACCCCCACTCGTACAAAGGTACGCTAGTACAGCGGAGGCGACGCTGGGCGCCGTGCTGCAGGCCGAGCACGGGAACGCGTCCGCGCCGTCGCCGCAGAACTCCGACACTAGCGAGGGCAAAGATGGTAAAGGCATTGCCCGTGGGCTCGCCAACTGGCGGGAAGGTGTGTCCCGCTGCAACACGAGCGCGCAGCTGGCCATGTTGCTGCAAGCGCTGGAGGCGTCCGTGGCGTGGGATAAGAGCATTATGAAGGCGAACTGCCAGTTTTGCCTGAGCGGTGACAACGAAGACCAGTTGTTGTTGTGCGACGGATGCGACAAGGGATATCATACTTACTGCTTCAAGCCGAGTATGGACAAAATACCTGATGGTGATTGGTATTGCTGGGAATGTGTGAACAAGGCACGTGGAGAAAGGGTGTGCATAGTGTGCGGTGGGGCTAACGCCGGTACGCGTACAATTCCGTGCGCATTGTGTGCCCGCGCCTACCACCAAGACTGCCACTACCCGCCGCTACTGAAGAATCCCCGCGGCAAGTGGTACTGCGCCAACTGCATCTCGCGCGCGCCGCCCAAGAAGCCGCGCAACACCAAGAAGCGCGAGGCCAAGCACCGGGACCTCAACGCCAGTGCGGACGACCAGAACATGGTACCCAGGTATGTCTTATGA
- Protein Sequence
- MDKDGGEGGEAAGKGPPDGLLDAAGLFGAYWGRDGAGAGGAAAAQAQAQAQAALFGFGSRYPPPTTLGVAANQAASLGLHPATSAAWWSMASHLAAQDYLARLQASGLNFPPLADPYAALSALSGAGLKQPPKPGKLSSRNERSGRSSTSSSASTKEKSSCTSSTNSQNMRSQYGLPKTSSPSAMHHSQSLSSLASLNSLVSAPHQSKPSSKPSPVPPPSKKPSSSSSSSMSSGKGKERELALLRGDLMLAQAAAHGAYHAAVAAAAKGKNMSPLYPFGMPGSEKDRHAGIDSLTGLPHTILSDPSSVLGGVRLPPDTEIIKYTSSLAGGPKAGSGTTRGRKKTISLDPPHVSVHPADRSTPLPSKRPKLDEYGNSRSSVEVIRLPNKPDGRPGHNSLSGTPPPNLSDYAGISRELLQTIASQSGVSLAALERQLAGSTAAATDSGLNLSTKSGAESPLDLGVKLGSMEDDAPLNLSLKPTPASSQASDALSRLTSLSSSLNASSSHDRISRRKPGARPRRVAPDAPHAECPRPRSSGSEDSESVAGWAGREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAHQLLAETDLEKLKALLGDQASTDSECPSDSCPSDSDASDTSRRPNDAQLRLPLALGWKRVTVIKGLSRNCNIKGDVTYTPPEPHASLSIRSAQELHNFLESNPCPPLSTDNFSFSARTVLGEYMQPGDQGEPLVYNENEINKRLEEARALAGGGRPTPPPLDRRMELARLQQAARDARRDASARSRDQARMERSEKAELAKREKEARSQQLLEHINKNRTQLTIEPLPSIPKTGIDEWKTPDIVMGPATKTNKDRTMPPISLSLIPVPGPKDTSNSPIKTMKFDQSGWKEEVEEYNALDKMKDFAEKAAFDLPKRKDKQYDFTLIKSAEKRLKTPDKVNNLEKLIESYSRITEFINGCDWSKLQGDKKTEDPKSLEQKYLDAKNEFMSENLMLMPKENNTKSVLKEVIDLSEDDDKILTDIITKKINKGTFNVGKDGALSISVHPLGSQDVYGLAKRRKHEEIEKQKIEEQVKRQQEREIKRQQAILLKEQQKYITEERERRRQHTTFIRQLDSRRRWEDRERRKHQNLLDRLLAKEKKLQQRRKEMELLSELRRPQEDTSLSDQKPLPTLNRIPGLKLPGQAMADILQVYEFIHNFGQTLGFDMDAIPTLNTFQMALMPDCSVEAEEELVQVLTQLLITAIEDPGIPHPGRHTTLLGHAIRMGDITPHNLSEVLRIYLYANATGEVKALTGLTAERERERRVADHHQSEAEMQSTCASTKNAAYYEHLHSNATYKLSESLRDKPFLALNATTKARILAYICDELLQNKGVLRQVDASLEHLNQLKKERYLMDMKIRKVRVMHQRKVRAEQTEKQQALALERMQRLVEESSVNIRTSPHLDDENHQTPEKLETPKKDKDSSPHTDNEDKHGTPSPYKDTQPTEESDKELSPLKDLSNSMKNKEMLNNNKDECSPADNSKIDKDSVMGDCDAILSDLESEGTQPEEDEDKNLSSEEMARKLEKLLKLSEQQILQVSAGSHALRATCYGQDRYWRRYWSLGKCGGIFVEAMESAQPEIMNYHAHLENNALSGITPNDGKKKKKGQREKKDSLASETEKLNPETDALKKEEALKSELELKNIKSELNLSDHTQIIKYEPNVKHGACKVQGSSIKMEEKYIQQKQNNEEEDMLDIEDSIPTAFLVQKPTHKPLFATQAEPMDKPQEIVKVENIVKTENDPEEEENKDQLVNNLEELRKLAEAVSSQLDAAKKAEAEIKEEKEKIKQEPLDSTIAHQQLYTKILEGKWFSILRHESSFLNSINEIEKSNNLPEYCDNEHTCSEVILCQGHKWDVSNNLHLLNDPSLFTLNSMVTSVQVPSNNVYADSSLTMSGLDQDMIDASCNKDGGSPEMEVEEESKEQDNDLEKELQADALKHDLATQKAKANSLVSLGLLNFNALSTYVTCDSPPPIQMSAEELEQLEHCKQHGLPKKVEGNFVPRELRYGWWRITDADQVRTLLDTLHLRGVRERELHSSLTVHLPTVNNKLYIEKGDILSTELCVSHVDRVIAQSGGFPAPDAPNSYSAHTARRLDLQILHMVEQLEERVAAASMQVKGWRPNRVADAPAEPVARARHKLQALEAHIERRYLKPPLVQRYASTAEATLGAVLQAEHGNASAPSPQNSDTSEGKDGKGIARGLANWREGVSRCNTSAQLAMLLQALEASVAWDKSIMKANCQFCLSGDNEDQLLLCDGCDKGYHTYCFKPSMDKIPDGDWYCWECVNKARGERVCIVCGGANAGTRTIPCALCARAYHQDCHYPPLLKNPRGKWYCANCISRAPPKKPRNTKKREAKHRDLNASADDQNMVPRYVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01342243; iTF_00049930; iTF_00785230; iTF_00709263; iTF_00783508; iTF_01377496; iTF_00018189; iTF_01491961; iTF_00806749;
- 90% Identity
- -
- 80% Identity
- -