Basic Information

Insect: Pseudoips prasinana
Gene Symbol: clz9
Assembly: GCA_951640165.1
Location: OX621236.1:11203249-11206017[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.3e-07 0.00016 23.3 0.0 4 41 11 47 8 50 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.3e-07	0.00016	23.3	0.0	4	41	11	47	8	50	0.82

Sequence Information

Coding Sequence: ATGGCgcctaaaaaaaattacacgcCTCTTCAAATGGCCCAGGCGGTAGAAGCAGTCAGAAAAGGCGAGAAAACTGCGACTGCTGCAAAGAAGTATGGTGTACCCAGAATTACATTACATGATAAGATTTCCGGTAAGACTCCAGTTGAATGTTCCATGGGTCCTAAAACATATTTGTCAACGGAAGAGGAGGCTATTTTAGAAAAATGGGTACTTGACATGGCTGAAAAACACATTCCCGTTACTAGAGATGAGCTCCTCGATAGCGTACAACGTATCATAATTGATCAGGATAAAACAACCCCATTTACTGACAATAGACCGGGCAAGAAATGGTACAACCTTTTTCTAAAGAGACATCCTATATTGTCTGAGAGAACGGCACAAAATTTAACGACAGCTCGAGATGCTGTTACAGAAGAGCATATTAGGCGGTGGTTTGAAGAAGTTGAATCTTATCTACGCGAAAATGATCTCAAAGATGTATTAGAACAGCCGGCAAGAATATTCAACACAGACGAAAGTGCCTTTTTTTTGTCGCCTAAGGCTGGTAAAGTTCTTGCAAAAAAAGGTGACAAACATATCTACCAATCCTCCGGAGACGAAAAAGATAATTTGACAGTACTAATTACTGGAAATGCCGCTGGACAATTGGCACCACCCATGGTAGTATTTGCATATGAGAGAATCCCGGCCATAATTTCATCCCAGTTTCCTGAAGATTGGGCAATTGGACGTTCACAGAGTGGCTGGATGTGTGGCAGCACGTTTTATGAATACATAGCGAATGTTTTTGATCCATGGTTATTACAGCAAAATATCCAAAAACCCGTAGTGTTCTTTTTGGACGGTCATCGATCGCATATGACCCTGCATTTGTCGATGTTTTGTGCTCAAAATGGCATAGAAATCATAGCATTACACCCAAACAGTACGCACATTTTACAGCCAATGGATTTGCCTATATTCAGACCACTGAAATCATTCTGGAAAAAAGCAGTAAAGGATTGGAAACTACAAAATTTAGGACACAATTTAACAAAAGGTAAATTTGCCCCTGTCCTTAAAACAGCGTTGCAATCGCTCACTGATGATTCCATTAAGAATGGTTTTCGCGCTGGCGGTTTGTATCCTTTTGGCCCAGACTACATCGatctaactaaaataaaatctcGACAAAACCCGCAAGTAGCAACAGAACAGGCACTCTTTGTTAATTTCTTGGAAAAGGAAATAGTGGCAAAATTGGGGACAGAAAAGTTGCAGTTTTTCAATGAACTCTTTTATAAAGATCGAGATGAATTAAATTCTCGGTTAAATGAGGAAGACACGTCACTCTATATAATATGGGCTAGCAATAAACAGAGAGTTCAACGTACAGCTCACGTTGTTGAACGATCAGTACAAGCTGAAATTAACTTGATTCAAGGAGATGTTTCCAATCTAGTGGAACATTGTGATAACAATGGTGCAAATTTAGGTCCTTTAAATGAAACCAGAACATCTAATCATTCTTCATCGAATATACTGACAAACCCAACTAGTGGACAAGAATCAAAAGAAACAACAAATAACACCTCAATTATTGATCACCCGAGTTGTTCTAACATAACAGATTCAGTTACAATACCTTCGTCATCTTGCTCTTCAACTTCAGCTACGGCAGAATCCACAACTGTAAAAGAGACGACCAGACCCGAACCAAAAGAAAACTTTAATGACGTGTTAATTGTTAATGAGCAAAGTTCTTCCAACCAATTAGTAAATCCACTTCAGACAGCTGCCAATGCCTGCACTTCAACATTTACCCTCAATGAGAATTCTGTAGTAGAAATAATTTCTTCAAAAGAGACGATCACACTTGAATCCAAAGAAAAGTCTAATGAAGCTTTGGTAATTAATCAGCCAAGTTCATCGAAGCAAGCAAGAGGTTTACTTCAGATATCTTCAACTTCTTCAATGTGTGTTCTTCAAAGTGCTGCAGAAAAAACACCTTTAAAAGAGATAATAAGCACTAATACAACAAAAACTGTTGCAAATAAAGTGGGAAATACACATATTCCATCGCCATTTATACGAAATTTATTTTGGCCCGGAGAAGATGAagataaaaaaggtaaaaaaagaaaattaagagAAAAAATTCCTTCTGCCATCACAAGTAAATCGTGGAGGGATTATCACGAAGTGAAAGAGAACCAAAAAAGAGAAGCAGCAAAACTTAAAGAAATTAAAGCCCAAGAAAGAGTAGAGAAAAGACAGTTAAAACAGAGAGAAAtggaaaacaaaaagcaaaatagAGTAAAAGATAAAGAACATAAGaagaaaaaactaaatacaATACCAAAACCGACACCAAGTGATACATCGTCGGACAATACAGACACCGAGGTAAACTATGCAGAAAGTGAAGATAGCTACAACATGGAAATCGAACAAGAACTAACAGACGAAGATTACACAGACGAAGATAAGACAGTGAGCAAATATTCTAAGCCAGCAAAAACATATTCTAGTGGAGATTATGTTATAATCCAATACGAAGGAGAATTTTTCCCAGGcgaaattaaaaatgttgatAATAACAAATTTGAAATTAGCACCATGACCTTTTCTGTGGGTAACACGTTCAAATGGCCGGAAAAAGAAGATAAAATCTGGTACCAAAAGTCTGACATAGTCAAACCAATTTCAAAACCAACGCTATGcaataaaagaggtttttataTGATACCAGAAATGAAAGAATATCTGCCTTTCACAATGTAa
Protein Sequence: MAPKKNYTPLQMAQAVEAVRKGEKTATAAKKYGVPRITLHDKISGKTPVECSMGPKTYLSTEEEAILEKWVLDMAEKHIPVTRDELLDSVQRIIIDQDKTTPFTDNRPGKKWYNLFLKRHPILSERTAQNLTTARDAVTEEHIRRWFEEVESYLRENDLKDVLEQPARIFNTDESAFFLSPKAGKVLAKKGDKHIYQSSGDEKDNLTVLITGNAAGQLAPPMVVFAYERIPAIISSQFPEDWAIGRSQSGWMCGSTFYEYIANVFDPWLLQQNIQKPVVFFLDGHRSHMTLHLSMFCAQNGIEIIALHPNSTHILQPMDLPIFRPLKSFWKKAVKDWKLQNLGHNLTKGKFAPVLKTALQSLTDDSIKNGFRAGGLYPFGPDYIDLTKIKSRQNPQVATEQALFVNFLEKEIVAKLGTEKLQFFNELFYKDRDELNSRLNEEDTSLYIIWASNKQRVQRTAHVVERSVQAEINLIQGDVSNLVEHCDNNGANLGPLNETRTSNHSSSNILTNPTSGQESKETTNNTSIIDHPSCSNITDSVTIPSSSCSSTSATAESTTVKETTRPEPKENFNDVLIVNEQSSSNQLVNPLQTAANACTSTFTLNENSVVEIISSKETITLESKEKSNEALVINQPSSSKQARGLLQISSTSSMCVLQSAAEKTPLKEIISTNTTKTVANKVGNTHIPSPFIRNLFWPGEDEDKKGKKRKLREKIPSAITSKSWRDYHEVKENQKREAAKLKEIKAQERVEKRQLKQREMENKKQNRVKDKEHKKKKLNTIPKPTPSDTSSDNTDTEVNYAESEDSYNMEIEQELTDEDYTDEDKTVSKYSKPAKTYSSGDYVIIQYEGEFFPGEIKNVDNNKFEISTMTFSVGNTFKWPEKEDKIWYQKSDIVKPISKPTLCNKRGFYMIPEMKEYLPFTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01124537;
90% Identity: iTF_01125413;
80% Identity: -