Ofur001196.1
Basic Information
- Insect
- Ostrinia furnacalis
- Gene Symbol
- clz9
- Assembly
- GCA_004193835.1
- Location
- NW:101209-105513[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-08 9.3e-05 21.8 0.0 4 41 50 86 47 89 0.82
Sequence Information
- Coding Sequence
- ATGACGTTTCATACATTCGGCCATTTTGTACAAAATGGCGTAATGATATGTTTCGTCCGCGGTAGATCTCGAAAGAAATCCAGTTTTATTAGTGAAATCGCTAAGGAGGTAGCAGGCATGGCgcctaaaaaaaattacacgccTCTTCAAATGGCCCAGGCGGTAGAAGCAGTCAGAAAAGGTGAGAAAACTGCAACTGCTGCAAAGAAGTTTGGTGTACCCAGAATTACATTACATGATAAGATTTCCGGTAAGACTCCAGTTGAATGTTCCATGGGCCCTAAAACATATTTGTCAACGGAAGAGGAGGCTATTTTAGAAAAATGGGTACTTGAAATGGCTGAAAAACACATTCCCGTTACTAGAGATGAGCTCCTCGATAGCGTACAACGTATCATAATTGATCAGGATAAAACAACCCCATTTACTGACAATAGACCGGGAAAGAAATGGTACAACCTTTTTCTAAACAGACATCCTATATTGTCTGAAAGAACGGCACAAAATTTAACGACAGCTCGAGATGCTGTTACAGAAGAGCATTTAAGGCGGTGGTTTGAAGAAGTTGAATCTTATCTACGCCAAAATGATCTAAAAGATGTATTAGAACAGCCAGCAAGAATATTCAACACAGACGAAAGTGCCTTTTTTTTGTCGCCTAAGGCTGGTAAAGTTCTTGCAAAAAAAGGTGACAAACATATCTACCAATCCTCCGGAGACGAAAAAGATAATTTGACAGTACTAATTACTGGAAATGCCGCTGGACAATTGGCACCACCCATGGTAGTATTTGCATATGAGAGAATCCCGGCCATAATTTCATCCCAGTTTCCTGAAGATTGGGCAATTGGACGTTCACAGAGTGGCTGGATGTGTGGCAGCACGTTTTATGAATACATAGTGAACGTTTTTGATCCATGGTTATTACAGCAAAATATCCAAAAACCCGTAGTGTTCTTTTTGGACGGTCATCGATCGCATATGACCCTGCATTTGTCGATGTTTTGTGCTCAAAATGGCATAGAAATCATAGCATTACACCCAAACAGTACGCACATTTTACAGCCAATGGATTTGGCTATATTCAGACCACTGAAATCATTCTGGAAAAAAGCAGTAAAAGACTGGAAACTACAAAACTTAGGACACAATTTAACAAAagATAAATTTGCCCCTGTCCTTAAAACAGCGTTGCAATCGCTCACTGATGATTCCATTAAGAATGGTTTTCGCGCTGGCGGTTTGTATCCTTTTGGCCCAGACTACATCgatctaactaaaataaaatctcGACAAAACCCGCAAGTTGCAACAGAACAGGCACTCTTTGTTAATTTCTTGGAAAAGGAAATAGTGGCAAAATTGGGGACAGAAAAGTTGCAGTTTTTCAATGAACTCTTTTATAAAGGTCGAGATGAATTAAATTCTCGGTTAAATGAGGAAGACACGTCACTGTATATAATATGGGCTAGCAATAAACAGAGAGTTCAACGTACAGCTCACGTTGTTGAACGATCAGTACAAGCTGAAATTAACTTGATTCAAGAAGATGTTTCCAATCTAGTGGAAAATTGTGACAACAATGGTGCAAATTCAGGCCCTTTAAATGAAACCAGAACGTCTAATAATTCTACATCGAATATACTGACAAACCTAACTAGTGGACAAGAATCAAAAGAAACAACAAATAACACCTCAATTATTGATAAGCCGAGTTGTTCTAACATAACAGATTCAGTTACAATACCTTCGACATTTTGCTCTTCAACTTCAGCTGCGGCAGAATCCACAACTGTAAAAGAGACGACCAGACCAGAACCAAAAGAAAACTTTAATGACGTGTTAATTGTTAATGAGCAAAGTTCTTCCAACCAATTAGTAAATCCACTTCAGACTGCTGCCAATGCCTGCACTTCAACATTTACCCTCAATGAGAATTCTGTAGTAGAAATAATATCTTCAAAAAAGACGATCACACTTGAATCCAAAGAAAAGACTAATGAAGCTTTGATAATTAATCAGCCAAGTTCATCGAAGCAAGCAAGAGGCTTACTTCAGATATCTTCAACTTCTTCATTGTGTGTTCTTCAAAGTGCTGCAGAAAAAACACCTTTAAAAGAGATGATGAGCATTAATACATCAAAAACTGTTGCAAATAAAGTGGGAAATACATATATTCCATCGCCATTTAaacgaaatttattttggcCCGGAGAAGATGAAGataaaaaagggaaaaaaaGAAGATTAAGAGAAAAAATTCCTTTTGCCATCACAAGTAAAACGTGGAGGGATTATCATGAAGTGAAAGAGAACCAAAAAAGAGAAGCAGCAAAACTAAAAGAAATTAAAGCCCAAGAAAGAGTAGAGAAAAGACAGTTAAAACAGAGAGAAATGGaaaacaaaaagcaaaataGAATAAAAGATAAAGAACATAAGAAGAAAAAACGAAATACAACACCAAAACCGAAACCAAATGATACATCGTCGGACAATACAGACACCGAGGTAAACTATGCAGAAAGTGAAGATAGCTACAACATGGAAATCGAACAAGAACTAACAGACGAAGAAATACCATTGAGCAAATATTCTAAACCAGCAAAAACATATTCTAGTGGAGATTATGTTATAATCCAATACGAAGGAGAATTTTTCCCAGgcgaaattaaaaatgttaataataacaaatttgAAATTAGCACCATGACCTTTTCTGTGGGTAACACGTTCAAATGGCCGGAAAAAGAAGATAAAATCTGGTACCAAAAGTCTGACATAGTCAAAGCAATTTCAAAACCAACGCTATGCAATAAAAGAGGTTTTTATACGATACCAGAAATGAAAGAATATCTGCCTTTCACAATGTAa
- Protein Sequence
- MTFHTFGHFVQNGVMICFVRGRSRKKSSFISEIAKEVAGMAPKKNYTPLQMAQAVEAVRKGEKTATAAKKFGVPRITLHDKISGKTPVECSMGPKTYLSTEEEAILEKWVLEMAEKHIPVTRDELLDSVQRIIIDQDKTTPFTDNRPGKKWYNLFLNRHPILSERTAQNLTTARDAVTEEHLRRWFEEVESYLRQNDLKDVLEQPARIFNTDESAFFLSPKAGKVLAKKGDKHIYQSSGDEKDNLTVLITGNAAGQLAPPMVVFAYERIPAIISSQFPEDWAIGRSQSGWMCGSTFYEYIVNVFDPWLLQQNIQKPVVFFLDGHRSHMTLHLSMFCAQNGIEIIALHPNSTHILQPMDLAIFRPLKSFWKKAVKDWKLQNLGHNLTKDKFAPVLKTALQSLTDDSIKNGFRAGGLYPFGPDYIDLTKIKSRQNPQVATEQALFVNFLEKEIVAKLGTEKLQFFNELFYKGRDELNSRLNEEDTSLYIIWASNKQRVQRTAHVVERSVQAEINLIQEDVSNLVENCDNNGANSGPLNETRTSNNSTSNILTNLTSGQESKETTNNTSIIDKPSCSNITDSVTIPSTFCSSTSAAAESTTVKETTRPEPKENFNDVLIVNEQSSSNQLVNPLQTAANACTSTFTLNENSVVEIISSKKTITLESKEKTNEALIINQPSSSKQARGLLQISSTSSLCVLQSAAEKTPLKEMMSINTSKTVANKVGNTYIPSPFKRNLFWPGEDEDKKGKKRRLREKIPFAITSKTWRDYHEVKENQKREAAKLKEIKAQERVEKRQLKQREMENKKQNRIKDKEHKKKKRNTTPKPKPNDTSSDNTDTEVNYAESEDSYNMEIEQELTDEEIPLSKYSKPAKTYSSGDYVIIQYEGEFFPGEIKNVNNNKFEISTMTFSVGNTFKWPEKEDKIWYQKSDIVKAISKPTLCNKRGFYTIPEMKEYLPFTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01125413; iTF_01264553;
- 90% Identity
- iTF_01125413;
- 80% Identity
- -