Ppra018561.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- -
- Assembly
- GCA_951640165.1
- Location
- OX621242.1:3725486-3725947[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8e-08 2.1e-05 26.1 0.1 3 32 17 46 15 60 0.93
Sequence Information
- Coding Sequence
- atgGTAAGaacttacaaaaagaaaagctCCAGAAACAGTTGGTCTGTAGAAAGCATGAAACACGCAATTGATGCAGTTTTAAGCAAATCAGCAGGTTACAGAAAAGCAGCTCAATTGCACGGTGTTCCACAGACCACGGTGTTTCACGTCGCAAAAATAAGGAAAGGCGAGATATCTCTTAATTCAACTCCAGGTAACTTTAAACCCGTATTTTCCAAACAAGAAGAAGAGGAGCTTGTTAGATACGTAAAAGATATGGAAAAACGATTATTTGGTTTGACAACTGTTGGCCTACGAAAACTAGCTTATCAGCTTGCAGAAAAAAATGCTAAAGCTCACAACTTTAACCATGATAAAAAGATTGCCGGTATAGATTGGTTAAAAGGCTTCATGAAACGTCATCCGGATTTATCAATTCGAAAACCAGAAGCCACATCGGCAGCACGAAGCTATGGGTTTTAA
- Protein Sequence
- MVRTYKKKSSRNSWSVESMKHAIDAVLSKSAGYRKAAQLHGVPQTTVFHVAKIRKGEISLNSTPGNFKPVFSKQEEEELVRYVKDMEKRLFGLTTVGLRKLAYQLAEKNAKAHNFNHDKKIAGIDWLKGFMKRHPDLSIRKPEATSAARSYGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276353; iTF_01431768; iTF_00375103; iTF_01264360; iTF_00833909; iTF_01085086;
- 90% Identity
- iTF_01085086; iTF_01264360; iTF_00375103;
- 80% Identity
- -