Ppra020455.1
Basic Information
- Insect
- Pseudoips prasinana
- Gene Symbol
- dl
- Assembly
- GCA_951640165.1
- Location
- OX621243.1:2005931-2036387[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.04 7.5e+02 2.0 0.0 1 16 32 47 32 53 0.91 2 4 1.2 2.2e+04 -2.8 0.0 110 144 223 257 202 262 0.68 3 4 9.2e-22 1.7e-17 65.9 0.1 9 61 627 679 621 681 0.95 4 4 8.9e-36 1.7e-31 111.5 0.0 12 122 680 791 678 794 0.93
Sequence Information
- Coding Sequence
- ATGATGACAATTAAATGTAACCAACAACTTGAAGCGATTACTTTGGCGGACCCGAGCTACGCGAGCATGGCGCGGCCGCACGCGGAGCCCTGCGTGCGGATCTCCGAGCAGCCGGCCAGCAAGGCTCTAAGAAACCGGTTTTACGACGGCGCGCCCGCGCGCTGTCGGGCTTTAGCGCGCCGGGAGATACTATTCAATATGAGCGTAAAttcagtgcatgacgtggaatTAGAGTCAGATAGTATGGATGAAGAGGACCAAACAGGAGGAAGTGTACAACAAGGTTATAATGATGAGAACTTACACAATACAGAAGAACGCGGATTGAGTGAGAATGAAGGCTGGGCATTAGTAAGTAAAGATAAAAGAAGGAAAACAGAAAAGATAGATGTCAGTATAACTAGTATGGAAAAGTTACCAAGACAGTTCACACTTGCCAAATTATTTGATTCCCAAAACATATTAGGAATTAATCGTGTGAAATTCGTAAACGCTTTTAAAGTGATTGTTAGTTTTGATGACGAAACTAAAGCAGACAAATTAATAACATGCCAACACTTTAAAGAAAAAGAGTGGAAAATACAGAAGACGTGGGAAGTTAATTCAACATATGGCATTATTAGGAATATAGATATTGACTTATCCGAAGCGGACCTCTTAGAATGCATTAAAACTTACAACAAACTAAACATTCGGTCTGTGAAAAGATTAAATCGTCGAAATACTGAGTCAGGGTGGGTACAAAGTGAAAGTGTTCGTATATGTTTTGAAGGAGGTTGCCTCCCTcaatatattaagatatttaaaGTAAGTGTTGCCGTGGAACCATATGTTTTTCCGGTAACGCAATGTTCGCGATGTTGGCGCTTCGGTCACGGAATAAAAATATGTCCATCACTTAAAGTTATCTGCCCGAAATGTGGGAAACATCACCCTAATTGCGAGACCACAATATTTAAGTGTGTAAATTGCGGAGGCAATCACATGGCTTTAGCGAAAGCGTGTCCAGCGTATCTAAAAGAAAAGAAGATCAGAGAGCTGATGGCCGATTTTAATTGCACATACCGCCGAGCGTTGACCATGTACGTTCCGCCGTTTTCACCACGACCCGTTGATCAATTCCCTATTACTAAAATCAACACAATCCCTCAAGAATTTGGACAAAATAAATCGTCATACCCCATGACATACGCAGCAGTAGTGACTAATGCGCCTATACAAACGGATCATATTCAAGATCAgtctggtgagcacaaaaataaaacttataaacgTAAGCATCGCAGTTCATCGGGACAATCAACAAATGAAGATGAGTCACTACCGATGGAGGTACATACATTGAACACGGAGAGGCATACGGTCGCCGAGGTGCACACGGCTTCTGACGATCGCAATGAAGTTGGGAGTATAATCAATTGCAACATTAACGATACTCTTATCaacgataatatatatatagatgagcGCGCTAATAATCAACCAAATGCAGAGTCGTGTTCTAGTAAATTGATCGCTATATCTGAAGCTCTTTCCTATATAAAAtcaatcgattttaataaatttgttatttttaccgACTCGAAAAGTTCCCTGCAACACGTGGCTCGGTGTACCTCTTGCTTAAGAGCAACTCCGATCGCTTACAGCATTATCAAGGCAATATTTGAACTGAGGGCAGATTCAAAAGAAGTTATCCTCCAATGGATTCCTTCACATATTGGTTTGGCGGGGAATGAGAGAGTAGATCAACTTGCGAAAGAAGCTTCTTGTGATGGCGTATACATTAATGTGTCCCCCTACTTTACAGACTGTATTTCGTTAGTTAAAGAATTTTGTTATGATCTGTGGAAAGTGCATTTCGATGAGAGATCGGTGATGAAAGGAATTTGGTTCCGATATGAGTGCGAGGGTCGGTcagcgggttcgattcccggcgTGAACAGCACTACAGACCACAAGACTTACCCCACGATAACTATAACTGGATACGTTGGACCAGTGGTCATCGTAGTGTCATGTGTCACCAAAGACACTTTTCTATTCCGGTATCCATGCGAGGGTCGGTtagcgggttcgatccccggcGTGAACAGCACGCCCGAACACAAGACTTACCCTACGATTTATATAGATGGTTACATTGGGCCTGTCTTCATCGTGGTATCATGTGTAACCACAGATTTACTAGCACATCCGCACAACCTGGTGGGGCGGGAGAGGTGCGAGCGCGGCGTATGTACGATCCCAACGAGAATCACCGAGGACAACTGCAGCTATGAGTTCAAGAACCTGGGCATACAATGCGTCAAGCGAAGAGACATCGCCGAGGCGCTGCGCGTCAGAGAATCACTCAGAGTCGACCCTTTTAGAAGTAAGTGCATTATATGA
- Protein Sequence
- MMTIKCNQQLEAITLADPSYASMARPHAEPCVRISEQPASKALRNRFYDGAPARCRALARREILFNMSVNSVHDVELESDSMDEEDQTGGSVQQGYNDENLHNTEERGLSENEGWALVSKDKRRKTEKIDVSITSMEKLPRQFTLAKLFDSQNILGINRVKFVNAFKVIVSFDDETKADKLITCQHFKEKEWKIQKTWEVNSTYGIIRNIDIDLSEADLLECIKTYNKLNIRSVKRLNRRNTESGWVQSESVRICFEGGCLPQYIKIFKVSVAVEPYVFPVTQCSRCWRFGHGIKICPSLKVICPKCGKHHPNCETTIFKCVNCGGNHMALAKACPAYLKEKKIRELMADFNCTYRRALTMYVPPFSPRPVDQFPITKINTIPQEFGQNKSSYPMTYAAVVTNAPIQTDHIQDQSGEHKNKTYKRKHRSSSGQSTNEDESLPMEVHTLNTERHTVAEVHTASDDRNEVGSIINCNINDTLINDNIYIDERANNQPNAESCSSKLIAISEALSYIKSIDFNKFVIFTDSKSSLQHVARCTSCLRATPIAYSIIKAIFELRADSKEVILQWIPSHIGLAGNERVDQLAKEASCDGVYINVSPYFTDCISLVKEFCYDLWKVHFDERSVMKGIWFRYECEGRSAGSIPGVNSTTDHKTYPTITITGYVGPVVIVVSCVTKDTFLFRYPCEGRLAGSIPGVNSTPEHKTYPTIYIDGYIGPVFIVVSCVTTDLLAHPHNLVGRERCERGVCTIPTRITEDNCSYEFKNLGIQCVKRRDIAEALRVRESLRVDPFRSKCII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -