Pvib019336.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- dsx
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000424.1:178562-179280[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-23 5.2e-19 68.3 10.1 2 46 45 89 44 90 0.97
Sequence Information
- Coding Sequence
- ATGATCAATAAAGGAGCATTCAGCCAACCAGAGGATATGTCTGTTTGTCCACTTTCCTTAACTACATCCAGCCCGAACAGTCCGGCTAATGATGGAAGTCGCAGCGCATCCAGCACTTTTAACCCGCGCACCGCACCCAATTGCGCCAGGTGTAAGAATCACGGCCTCAAGATACCGCTCAAGGGACACAAGAGATATTGCCGATTCTGGAACTGCGTCTGCGAAAAATGCGTCCAAACTAGCACCAGGCAGAAAGTCATGGCTAGGGAGACAGCCCACCGAAGAGCTCGTAAATTACACGAGACCAAAATCACCGAATTTCGCAAGGCTCAAGAAAGGGCCCGAATGATGGGCGAGAAATCGCCGGAACCTCCGTTGGAGTTGTTCAGCCCGGTCATGAGCCCGGACGGGAGATCCAGCAAGGGAGCCGGGTCCATTGCCGATGTCATCGACGTCGAACCCAGCAGTCCCGGATCGACTAGCGTTAGCGATTCTGGAGTCTATGTACCGATCCCGTTGAATAATAAGACTCCGCCGAGCTCGTTCGGTAATACGTCTTCGATTGTGGTATCTGCGATAATTTCGGTTCCCGATGGGCTGATTTTATTCAGTTTATTGGATGCTGTGCCTTGGACGTAG
- Protein Sequence
- MINKGAFSQPEDMSVCPLSLTTSSPNSPANDGSRSASSTFNPRTAPNCARCKNHGLKIPLKGHKRYCRFWNCVCEKCVQTSTRQKVMARETAHRRARKLHETKITEFRKAQERARMMGEKSPEPPLELFSPVMSPDGRSSKGAGSIADVIDVEPSSPGSTSVSDSGVYVPIPLNNKTPPSSFGNTSSIVVSAIISVPDGLILFSLLDAVPWT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01177765; iTF_01490991; iTF_01262480;
- 90% Identity
- iTF_01262480;
- 80% Identity
- -