Pvib011888.1
Basic Information
- Insect
- Pseudococcus viburni
- Gene Symbol
- retn
- Assembly
- GCA_033439095.1
- Location
- JAVBJF010000158.1:555796-573015[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-19 2.2e-15 57.3 0.1 18 89 8 77 3 77 0.93 2 3 2.4 8.5e+03 -2.3 0.0 6 54 106 159 102 174 0.53 3 3 6.2 2.2e+04 -3.6 0.0 30 39 202 211 197 216 0.74
Sequence Information
- Coding Sequence
- ATGTCAAGGTGTTACGTAGaAACTCCTGTGACCAGGCTGCCGATAATGGCGAAATCGGTGTTAGATTTGTACGAATTATACAAGCTGGTTGTACAAAGAGGCGGTCTCGTAGAcgttatcaataaaaaattatggcaAGAAGTAATTAAAGGATTGAATCTTCCATCGTCGATAACATCAGCAGCTTTCACATTACGCACACAATACATGAAGTTCCTATATCGCTACGAATGTCACAAATTGGACTTGAGCAAACCGCACGAATTGCAAGCGGCCATCGAGGGTAATAAACGCGAAGGCAGAAGAACCAGCTATTACGGAGATTTAGGCCAGATGCACAGTCCGAACAGCAACGGGCCCAATAATGGCCATCCTCCTACATCTCTGCATCACGGTCAATCGCAAATGTCGCCGGTCAGTTTGGTAACCACTTCCACCTCGAACACCGGTAGCAATCGTCTACAGATGAATGGTCATTCCAACCAGTTTGGTAGTCATACTGGTAACGCATCCATTCCTAGCGCTCACGGTATATCTCCTTTAATATTGCAAGGTTCGTCTCCTGAATTGCCCGAACCGAGTAATTTAAGCGGTTTCATGACCCAGCTGGCGTTGTGGAATTTGTACAACGGCGCGATGAAAACGCCGCTTCAGCAACCTCCAGTATTACCATTCCAACCTGCCAGGCCGCCGAGTCAAAATTCCAATAATGAAGCGCCCCTGGACTTGGGCAAAAATCGTAAAGAAGATAGGAGTAGTTTGGAATTACCGGCGCCGAAGAGGGAGGCTCGCGATAATGATGCCGACGACGAGGAAGAGAACGAAACCGAAGATACAGATAGTGATTCTGATGATGAGCCGGAGTGCCAGATACCTTTGAATAATTCTAGTCAAGGTAATTAG
- Protein Sequence
- MSRCYVETPVTRLPIMAKSVLDLYELYKLVVQRGGLVDVINKKLWQEVIKGLNLPSSITSAAFTLRTQYMKFLYRYECHKLDLSKPHELQAAIEGNKREGRRTSYYGDLGQMHSPNSNGPNNGHPPTSLHHGQSQMSPVSLVTTSTSNTGSNRLQMNGHSNQFGSHTGNASIPSAHGISPLILQGSSPELPEPSNLSGFMTQLALWNLYNGAMKTPLQQPPVLPFQPARPPSQNSNNEAPLDLGKNRKEDRSSLELPAPKREARDNDADDEEENETEDTDSDSDDEPECQIPLNNSSQGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262249;
- 90% Identity
- iTF_01262249;
- 80% Identity
- -