Plon012316.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudococcus longispinus
Gene Symbol
PZF1
Assembly
GCA_900064475.1
Location
FIZU01026624.1:25742-30301[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 9.1e-06 0.00087 20.0 0.6 1 23 165 187 165 187 0.98
2 36 4.6e-06 0.00044 20.9 1.0 1 23 223 245 223 245 0.97
3 36 2.1e-05 0.002 18.9 1.5 1 23 261 283 261 283 0.98
4 36 0.01 0.98 10.4 0.6 1 23 288 310 288 310 0.97
5 36 0.00091 0.086 13.7 1.9 1 20 316 335 316 338 0.92
6 36 0.18 17 6.5 6.2 1 23 343 365 343 365 0.94
7 36 2.5e-05 0.0024 18.6 1.7 1 23 371 393 371 393 0.98
8 36 0.00011 0.011 16.6 2.6 1 23 397 419 397 419 0.98
9 36 0.00063 0.06 14.2 0.6 1 23 534 556 534 556 0.98
10 36 9.5e-05 0.009 16.8 5.0 2 23 563 584 562 584 0.96
11 36 0.01 0.96 10.4 0.4 1 23 587 609 587 609 0.97
12 36 5.7e-05 0.0055 17.5 3.9 1 23 614 636 614 636 0.99
13 36 1.8e-06 0.00018 22.2 0.6 1 23 640 662 640 662 0.98
14 36 1.3e-05 0.0012 19.5 1.8 1 23 666 688 666 688 0.99
15 36 1e-05 0.00099 19.8 1.6 1 23 692 715 692 715 0.98
16 36 5e-05 0.0048 17.7 2.2 1 23 720 742 720 742 0.98
17 36 0.011 1 10.4 6.0 1 23 746 768 746 768 0.99
18 36 4e-06 0.00038 21.1 2.2 2 23 776 797 775 797 0.97
19 36 0.001 0.099 13.5 1.3 1 23 801 824 801 824 0.96
20 36 3.1e-06 0.00029 21.5 1.4 2 23 855 876 854 876 0.97
21 36 0.019 1.8 9.6 3.4 1 23 880 903 880 903 0.96
22 36 0.00047 0.045 14.6 1.9 1 23 909 931 909 931 0.96
23 36 0.0031 0.29 12.1 1.9 5 23 938 956 937 956 0.97
24 36 4.7e-05 0.0045 17.8 2.5 2 23 962 983 961 983 0.97
25 36 0.00035 0.034 15.0 2.6 1 23 989 1012 989 1012 0.95
26 36 0.00052 0.05 14.5 1.1 3 23 1021 1041 1019 1041 0.92
27 36 0.086 8.2 7.5 4.6 1 23 1045 1067 1045 1067 0.93
28 36 5.2e-06 0.00049 20.8 6.8 2 23 1074 1095 1073 1095 0.97
29 36 1.6e-06 0.00015 22.4 1.3 2 23 1110 1131 1109 1131 0.96
30 36 0.00022 0.021 15.6 0.9 1 21 1137 1157 1137 1160 0.90
31 36 0.013 1.3 10.0 2.1 1 22 1166 1187 1166 1187 0.95
32 36 0.0046 0.44 11.5 3.1 1 23 1194 1216 1194 1216 0.97
33 36 0.00024 0.023 15.5 0.5 1 23 1222 1244 1222 1244 0.97
34 36 0.022 2.1 9.3 1.2 2 23 1251 1272 1250 1272 0.96
35 36 0.0067 0.64 11.0 6.2 1 23 1276 1299 1276 1299 0.97
36 36 0.00036 0.035 15.0 1.0 1 23 1305 1327 1305 1327 0.98

Sequence Information

Coding Sequence
ATGTACTCCGGCcagaatttattgaaaaatttcAATGGAAGCAATCAATACCAATATGAAGGGGTACCGAAAATCAAGGTGGAAAGAGAAGACGACTATGAAACTCCTATGGATGTCGAAGACGATACCGAATATCAAAATAACTACGATGTAGATCCCATAGATACCGAAGACGTTTCTGAATACCAAAATGATCGCGATAACGTTACCCATAACGTTAAGACAGAATCCGAATCAAATATTCCTAGTGAACATGATATTTCAGCCGCCGATAAATTACAgaatttcttcaaaaacgaAGGAATACGACTACCACGTGGTACAGAAATCCTTATAGCGCCTGTAACGTCATCGAGAGGTGCGTACGATAACCATTTGAACGAATCGGACTCAAACGAAGCACCTAACTTCGGTTCACCGGTTCCATACGAGCCATATGTACCAGACCTAGAAGATGATTCGTCACACTCGGgtggaaagttggaaaaaaaatatccatgttCACAGTGCGACAAAGCCTTCAGTACAAAACTTTTCCTCGAGACGCATATTCGTCTCCATACCCTGGAATCGCTTCCGGAACACCAGCTAAGCTTAGAACGCGAGCTCGGCCTGCAACGAGAATCGATGCACGTGTTACCATCGAAGGACGCTTCGGGCGACATCTTCGCTTGTCCCGTTTGCGATAAAACCTTCAACATGAAACGTTACCTATCGAATCATCTTCGTTCTCATAATATGAAACTGGTCGAATCAGATCCGAGTTTCAACGGAGAGTCGTATACTTGCCAGCAGTGTCAAAAATCGTATACGAAAAAGGCCTCTTTTATAGCTCACATGAAGGCCCACGACGACAGACCGTTCAAATGCGAAATATGCAGTCGACTGTTTCGCGAGGTGAACTCGTTAAACGTGCATCGTTCTTTACATTCCTCGAACTCCAAACACCAATGTACCGTTTGCGGGCTGTTCTTCAGATTTCGATCTCAGCTCAAGATACACGAATGGACCCACAGTAATAACAAATTCACTTGTAAATTCtgcggtaaaatttttcgtaattatttttcgtgcAAAAGTCACGAAAACAATCACGTCAACGGTAAACAATTCATATGTTCCTTTTGCGAGAAAACTTTCAAGTACAAGGTGGCTTTGAAGACACATTTATTAACCCATACCAGACCTTACAAGTGCGATTCGTGTAATCGTACTTTCGATAATTCGGCCAAATTACAAAACCATAAAAAGAAccatttgttcgaaaaattccaattggATATTTCCGAAAGCGATGTCGATCCTTTGGCTATGAACGGTGCCGCGGGCGCGGGTTATGTTAAACTCGAACCAGGCGACGACGACGGGTACCCGACCAATCGTAATAATTTGCAGCAATCGGCTCAAGGACTCGAACAACCAGAGATCAATTTCTTACCAGAATGTGGTCCTTACGACGAGTCAGCCAAATCAGAAACCGTAGTCGACGATTGTGTCGTGGGAAATCTACAGCTGCATTTTTTGGAAGGTGGAAACGAACCGAATGATGGGTCAATTCGAGGTTCGGAGAATTGCGATGATCAAAACGACGTACCATTGTACtcttgtcaatattgtaaaatcgatttcaagcAGTTGGAAGAATTCCAAGGTCATATGGCGTCTCACGAGGGTAAGCACGATCTCAACTGTAAACACTgcggacaaattttcaaacggttCAAGAAACTGGAGAAGCATTTACGTAAACACAACGAATACAAATGCGAAAGGTGTATCAAAAGTTTCGAAACCGAAGCCGAACTATTGCAGCATACGATTTACCATAAAGACGAATCTTTCAAATGCAACTATTGCGAAAGCATGTTCACCAATAAATACACCTTGCAATATCACATCAAACGCCATCTGAAACGTTACCGATGCAAATATTGTCCGAAAAGTTTCGATAACGAGAATCAACTCGAGACCCATATTGCCAGCCATCAATCAGTGTACAAATGCGACTTCTGCGATAAAGATTTCAAGTTTAATTCGCTGCTGCTGAATCATCTCAAGATCCACACCAGACAATACAAATGCGACCGATGCGACCGATCTTTTGATAAGAGTATCACGTTAACTAGACACCAGAGAAACGCCCATGCGCCTTCTCCTTTCATTTGCCATGTCTGCGAACGTTCGTTCAACTACGAATCAGCGTTCAATTCGCATTTACGAAGTCACAATCGCCAATACCAATGTGTCTATTGTCTTCGTAGCTTCGACGACGAGCATTGCTACAACAAACACGTCCGAAGACACGAGATGAAATTCACCGAACTCAAATGCGACAAATGCGACAAGAAGTTTAAATATTATTCGCAGCTTCAGGTTCATATTAAAAATCACGGCAACGTGTATCGCTGCGAAGAATGTAACATCGAGCTGAAACACTGGAAAAGCCTCGAAAAGCATAACCGACTCCTGCACAGCTCCGATACACCTTCTACTTCCACCGAGACAACTTCCGAAGGCGTCACCACCACCGATCCACCTTCTACTCCGGCTACCAACACTCTGAAATGTCCTAAATGCGGCAAACAATTCAAATACAATTCTCAACTGCTGcttcatttaaaaaaccacaaaaacgTGCATCGCTGCGAACCCTGCGACATGCAATTCAAAAACTACCGAACGTACCAAAAACACGTTCGAACCGAACACGAACAAATCCAAGAATACGCTTGTACCTTATGCGAGGCGAAATTCAAATACCAGAGTCAGCTCAAACACCACGCCGAATCGCATAACCGTAAATACGCCTGCGAATGTGGCAAAACCTTCAATTCGAAGAAATACTTCGTCAGTCATCGTCTCACCCATACCGTCGACAGCCTCAAATGCGACTTCTGCGATAAACAATTCAAGTACTACTCTACCCTGAAGATACATTTGAAATCGCACCAGAAAGATAGCACATTCCAGTGCTTCCATTGCGAACGTGTGTTTAAAACTAAATGGAAAATACAACGTCACATCGAGAACGTCCATTTGCGCGAGAACAAAGTCCTCGCTTGCCAAACCTGCAACAAAACCTTCAAATACCTATCGCAGCTGAAACTGCACTCTGCTCAGCACGAAAAAACATACTCGTGTAAGCTCTGCGATCGTTCCTTCAACAACCGACGTTATTACCTGTTCCATAAAAACAAACACGCCGCCGGATCCTCGTTGACTTGCCATCATTGCAGCAAATCCTTCAAATACAATTCCCAACTACGTATCCATATGAAATCGCACGTCAACGGTAAGAAATCCGCCATTCGTACGCAATGCTCGTGGAATTGCAATTTATGCGGTAAAAGGTTCAAGTTCCGGTCACTCCTCAAGAACCACATGATGATTCACGAAGGAGTTAAACCCTACCAATGTAACTATTGCGGCAAACGATTCGCCTGGAAGAGTAGCCTACAAATACACTCGTCGTTCGTACACAAACACAAGACACGTTTCTATTGCGAATCCTGCGATAGATATTTCTTCTACGAAAGTCAATACAAACAGCACATGTCCACTTGCCAATGGGACGTCTCTTTCAACTGCAAATATTGCGACAAACAgctaaaatctcgtaaaaccTACGAACTGCATTTACTCAAACACGAAGGCACCAAACAATTCATATGTGCCTATTGCGAAAAAGCCTTCTACACGAAGCAAGTACTCCTCAACCATATTAAAAGTCATCTCGAACGAGAAACCAAAACGTGCCCGGTCTGTAACCAACAATTCACTAGTGAGTTTCGTTACAACAGCCATGTCCAAAACCACTACGACGAATTCAGATGCGATATCTGcgataaagttttcaaatgcaagtataaaatgaaacGTCATTTTATGACAACGCATCAACCCAATTCTACCTATTCGTGTCAACACTgcggaaaattatttttacgcgAAAGTGCCCTTATCAATCATCAAGCCACGCATTTCGGAGCAGCCACCGTTAGTTCGGTAATCGTGCGAGAATTCGGAGAAGAGTCTTTCGAGCAGTACGAAACCTACGACGGTGATGAACGTTTACCAGATAAATACCATTCGAACGCCGAGCAGATCGATTGCAAGCCGGATCTTTCCGAATTGGGAATTTTAGTTCCAGAAGTGATTTACgaaaaccatttttaa
Protein Sequence
MYSGQNLLKNFNGSNQYQYEGVPKIKVEREDDYETPMDVEDDTEYQNNYDVDPIDTEDVSEYQNDRDNVTHNVKTESESNIPSEHDISAADKLQNFFKNEGIRLPRGTEILIAPVTSSRGAYDNHLNESDSNEAPNFGSPVPYEPYVPDLEDDSSHSGGKLEKKYPCSQCDKAFSTKLFLETHIRLHTLESLPEHQLSLERELGLQRESMHVLPSKDASGDIFACPVCDKTFNMKRYLSNHLRSHNMKLVESDPSFNGESYTCQQCQKSYTKKASFIAHMKAHDDRPFKCEICSRLFREVNSLNVHRSLHSSNSKHQCTVCGLFFRFRSQLKIHEWTHSNNKFTCKFCGKIFRNYFSCKSHENNHVNGKQFICSFCEKTFKYKVALKTHLLTHTRPYKCDSCNRTFDNSAKLQNHKKNHLFEKFQLDISESDVDPLAMNGAAGAGYVKLEPGDDDGYPTNRNNLQQSAQGLEQPEINFLPECGPYDESAKSETVVDDCVVGNLQLHFLEGGNEPNDGSIRGSENCDDQNDVPLYSCQYCKIDFKQLEEFQGHMASHEGKHDLNCKHCGQIFKRFKKLEKHLRKHNEYKCERCIKSFETEAELLQHTIYHKDESFKCNYCESMFTNKYTLQYHIKRHLKRYRCKYCPKSFDNENQLETHIASHQSVYKCDFCDKDFKFNSLLLNHLKIHTRQYKCDRCDRSFDKSITLTRHQRNAHAPSPFICHVCERSFNYESAFNSHLRSHNRQYQCVYCLRSFDDEHCYNKHVRRHEMKFTELKCDKCDKKFKYYSQLQVHIKNHGNVYRCEECNIELKHWKSLEKHNRLLHSSDTPSTSTETTSEGVTTTDPPSTPATNTLKCPKCGKQFKYNSQLLLHLKNHKNVHRCEPCDMQFKNYRTYQKHVRTEHEQIQEYACTLCEAKFKYQSQLKHHAESHNRKYACECGKTFNSKKYFVSHRLTHTVDSLKCDFCDKQFKYYSTLKIHLKSHQKDSTFQCFHCERVFKTKWKIQRHIENVHLRENKVLACQTCNKTFKYLSQLKLHSAQHEKTYSCKLCDRSFNNRRYYLFHKNKHAAGSSLTCHHCSKSFKYNSQLRIHMKSHVNGKKSAIRTQCSWNCNLCGKRFKFRSLLKNHMMIHEGVKPYQCNYCGKRFAWKSSLQIHSSFVHKHKTRFYCESCDRYFFYESQYKQHMSTCQWDVSFNCKYCDKQLKSRKTYELHLLKHEGTKQFICAYCEKAFYTKQVLLNHIKSHLERETKTCPVCNQQFTSEFRYNSHVQNHYDEFRCDICDKVFKCKYKMKRHFMTTHQPNSTYSCQHCGKLFLRESALINHQATHFGAATVSSVIVREFGEESFEQYETYDGDERLPDKYHSNAEQIDCKPDLSELGILVPEVIYENHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01263805;
90% Identity
-
80% Identity
-