Plon009357.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- dsx
- Assembly
- GCA_900064475.1
- Location
- FIZU01011888.1:1100-1555[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-22 7.8e-19 67.7 8.6 2 47 15 60 14 60 0.97 2 3 1.6 9.4e+03 -3.0 0.1 17 22 67 72 63 75 0.66 3 3 1.2 7.1e+03 -2.6 0.1 21 27 144 150 143 151 0.77
Sequence Information
- Coding Sequence
- ATGCCCgaagtcgttgaaaattcatcgccGGTCAAAAGAACGCCGCCGAATTGCGCTCGATGCAAGAATCACGGCGTCAAGAATATACTCAGCGGTCATAAAAGGTATTGTTTGTACTTAGAGTGTAAGTGCAGTAAATGCTTGTCGACGGTGGAACGCCAACGTGCCATGGCCAAAAATACCGCTTATCGGAGAGCCGAAAGGCAACACAAGAAGAAGCTCGAAGAATGGCAAAAAAGGGCGCAAACGGCTCGCGAAATGGGCCAACAAATACCACCGGAACCTGCCGAGCTTCCTAGCCCGATTTTGTCTCCGAAACTGCGAACACCTTCGGAGTACAGTTCGTCGGAACGTAATTTGTCGCCGAAATCGAATTATAGTCCTATTTCATCCGATGTATTGTCAGTCAGTTCGTTGAATTCGCGTGATAAAGGTAAGTGTTCTTATCGGAGTTAA
- Protein Sequence
- MPEVVENSSPVKRTPPNCARCKNHGVKNILSGHKRYCLYLECKCSKCLSTVERQRAMAKNTAYRRAERQHKKKLEEWQKRAQTAREMGQQIPPEPAELPSPILSPKLRTPSEYSSSERNLSPKSNYSPISSDVLSVSSLNSRDKGKCSYRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -