Plon004897.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- Su(H)
- Assembly
- GCA_900064475.1
- Location
- FIZU01065158.1:26625-28040[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-64 9e-61 203.8 0.0 1 123 196 318 196 318 0.99 2 2 0.47 3.7e+03 -1.6 0.0 56 107 405 457 377 464 0.64
Sequence Information
- Coding Sequence
- ATGCCGCATCAGTACGGGATGGCCTACAGTCTTCAGTATCGGAGTGGAGAACGTCGGCTTACCCGTGAAGCGATGGAACGTTATTTACGGGAGCGAAATGACATGGTTATTGTAATATTACACGCCAAagtagctcaaaaatcatatggcaacgaaaaacgatttttttgccctCCGCCGTGCATTTACTTAAACGGAGAAGGTTGGCGAATGCGTCAAGAGCAACTGAATCGAGATGGCGATCCTGAACATCCTACGCAGCTATGCGCTTTCATAGGTATTGGTAACTCTGATCAAGATATGCAGCAGTTAGACTTAAACAATGGTAAAACATATTGCGCTGCGAAAACCTTATACATATCGGACTCGGATAAACGTAAACATTTCATGTTATCGGTGAAATTATTCTATAGCAATGGACACAGTATCGGTTTTTTCAACAGCAAACGTATCAAAGTGATTTCGAAACCttcgaaaaagaaacaatCGCTGAAGAACGCCGATCTTTGCATCGCCAGCGGAACCAAAGTAGCATTATTTAATAGATTACGTTCGCAAACCGTCAGTACGCGGTATTTGcacgttgaaaataataatttccatGCCAGCTCCACTCAGTGGGGGGCGTTTACGATGTATTTATTAGACGACGACGAAAGCGAAAGCGAAGAATTTGTCGTAAGGGATGGATACGTGCATTACGGCAGTACAGTTAAATTAGTTTGTAGCGATACCGGTATGACTTTACCTAGATTAATTATTCGTAAAGTTGACAAACAGATGGCTCTATTGGAAGCCGACGATCCGGTCTCTCAATTACATAAATGTGCATTTTATATGAAAGATACCGAACGTATGTACCTGTGTTTATCTCAAGAACGcatcattcaatttcaatcgaCTCCTTGTCCAACTGAAACGAACAAAGAAATGATCAACGATGGCGCTTGTTGGACCATTATCAGTACCGATAAAGCCGAATATCAATTCTACGAAGGTATGGGCCCAGTCAAATCACCAGTCACTCCGGTACCTATTGTAAATAATCTGAATTTGAACGGCGGTGGTGAAGTGGCCATGTTGGAACTATctggagaaaatttcagtccTTATTTAAAAGTGTGGTTCGGCGAAGTCGAATCGGAAACTATTTATCAGTGCTTAGAAAGCATGTTGTGTGTTGTACCGGACATTTCGTCGTTCAGAGGCGAATGGTTGTGGATTCGACAACCTACACAGGTACCCATATCGCTAGTTCGAGACGACGGTATTATCTACGCGACTGGGCTCACATTCACGTATACTCCTGAAACAGTACCTAGATCGTTGTGTCCTCAACCTGATAATATTATCCGGCATAATCATTCGGATCGTATAAACGAAGATATTCATTGGCCTCAGAACGCCGGATTATAA
- Protein Sequence
- MPHQYGMAYSLQYRSGERRLTREAMERYLRERNDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLNGEGWRMRQEQLNRDGDPEHPTQLCAFIGIGNSDQDMQQLDLNNGKTYCAAKTLYISDSDKRKHFMLSVKLFYSNGHSIGFFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENNNFHASSTQWGAFTMYLLDDDESESEEFVVRDGYVHYGSTVKLVCSDTGMTLPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTERMYLCLSQERIIQFQSTPCPTETNKEMINDGACWTIISTDKAEYQFYEGMGPVKSPVTPVPIVNNLNLNGGGEVAMLELSGENFSPYLKVWFGEVESETIYQCLESMLCVVPDISSFRGEWLWIRQPTQVPISLVRDDGIIYATGLTFTYTPETVPRSLCPQPDNIIRHNHSDRINEDIHWPQNAGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01177548;
- 90% Identity
- iTF_01150118;
- 80% Identity
- -