Basic Information

Insect: Pseudoatta argentina
Gene Symbol: RREB1
Assembly: GCA_017607525.1
Location: JAANIA010000992.1:3247272-3254309[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.8e-05 0.0016 17.9 1.3 1 23 71 93 71 93 0.97

2 14 6e-05 0.0035 16.8 0.1 1 23 107 129 107 129 0.98

3 14 9e-05 0.0051 16.3 5.5 1 21 135 155 135 158 0.95

4 14 0.0033 0.19 11.4 0.1 3 23 256 277 254 277 0.96

5 14 0.004 0.23 11.1 3.7 2 23 283 305 283 305 0.96

6 14 0.12 7 6.4 0.2 1 23 532 554 532 554 0.96

7 14 1.4e-05 0.00078 18.9 0.2 1 23 563 585 563 585 0.98

8 14 0.0029 0.17 11.5 3.1 1 23 591 614 591 614 0.96

9 14 0.00048 0.027 14.0 2.4 1 23 983 1006 983 1006 0.96

10 14 0.00016 0.0091 15.5 0.2 2 23 1273 1294 1272 1294 0.97

11 14 0.03 1.7 8.3 3.2 1 23 1367 1391 1367 1391 0.96

12 14 4.5 2.6e+02 1.5 1.6 1 23 1471 1494 1471 1494 0.90

13 14 0.0021 0.12 12.0 0.5 3 23 1548 1568 1546 1568 0.96

14 14 0.0018 0.1 12.2 5.2 1 23 1574 1596 1574 1596 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.8e-05	0.0016	17.9	1.3	1	23	71	93	71	93	0.97
2	14	6e-05	0.0035	16.8	0.1	1	23	107	129	107	129	0.98
3	14	9e-05	0.0051	16.3	5.5	1	21	135	155	135	158	0.95
4	14	0.0033	0.19	11.4	0.1	3	23	256	277	254	277	0.96
5	14	0.004	0.23	11.1	3.7	2	23	283	305	283	305	0.96
6	14	0.12	7	6.4	0.2	1	23	532	554	532	554	0.96
7	14	1.4e-05	0.00078	18.9	0.2	1	23	563	585	563	585	0.98
8	14	0.0029	0.17	11.5	3.1	1	23	591	614	591	614	0.96
9	14	0.00048	0.027	14.0	2.4	1	23	983	1006	983	1006	0.96
10	14	0.00016	0.0091	15.5	0.2	2	23	1273	1294	1272	1294	0.97
11	14	0.03	1.7	8.3	3.2	1	23	1367	1391	1367	1391	0.96
12	14	4.5	2.6e+02	1.5	1.6	1	23	1471	1494	1471	1494	0.90
13	14	0.0021	0.12	12.0	0.5	3	23	1548	1568	1546	1568	0.96
14	14	0.0018	0.1	12.2	5.2	1	23	1574	1596	1574	1596	0.98

Sequence Information

Coding Sequence: ATGAGGAGACCGTCAAATGCGGTTAGACCGTCGGACGAGAACGTTGATAAGTGTTATTGTCTCGGCTCCATCTGCGGTTCGGTCTGGGTATCAGCTTCCGGAATACTTATGACTGGACCCGAGAATGGACCCAGCCAGGAACAGGAAAACGAAACGCAAATTGATGCTGCATCACCATCATcaagtGTTGAGCTGTCGGAGAATGGCGCGCATCCATGCCCGACGTGCCCGTCGGTATTTTCCAATTCCCACGAACTGACGAATCATCTGCGCGGCCACAATTCACCTCGCAGCACAGACTGCAGCGGCGAAGAGGACTACAGTTGCAGCGTATGTAATAAAGTACTTAGTTCGGCGAGTTCGCTGGATCGACACGTGCTGGTGCACTCAGGCGAACGACCGTTCAAGTGCAAACATTGCGATATGTCGTTCACGACGAATGGCAACATGAACCGGCACGTGAGGTGTACCCATCGGATGGTGTCGCCGAACAGTTGCACGGACTCTAAAGGCAGCAGCGGTTCGGAAAGACCGGCGGGGACAAGTCAAGACGAGTACAACAACAATGAGATAGCTAGGCACAATTCTCCGGACCTAATCGACGATCGACAGCAACCGTCTCCCAGCAACAACCGCGGAAACAAGCGGAAATGCGCGGAGGAGGACATCAGTGACATGGAGGACCAGAGGAGGCATAAGATCCTCTTGCACAACACCAAGATGTCGATCAGGTGTAGGCCAGAGGATGAGCAAAAAACCTTTGGTTGTTCGCTTTGCAGTCAGGATTTCGCAAGCAGTGCGACTTTGGAGTCTCATATGGAGCGCGTACATCCGGGTTCTCCAGCTACATGCGAGACCTGCAACCAATCGTTCAAGAATCATCGTGCGTTAAACCTTCATCGTTCAATGAGACACTACAAGAAGAACCCGGAAGGCAACAATAGCCGTAGCCTGCGCAACACTGTGGACGGTTTCAGGGATCTGACGTTTATTGATTTTTCGTCCATCAAATTTCCAACGATCGCTCGAGCAATGTGCGAGCGTGAACTGCATCGGCCGGCCTCTGGCGAAGCCAATAGGTTCCAGTGCATGAAGTGCTTGCACGCGTTTCCCTGCAGACAGGCCCAGCTGGCCCATGAAAAGGAATGCAAGGGTCCCTACAAGAACAAAAGAAACAGCAACgacaacaataataacaatgataTTAGTACTAACAACAATCTCGAGACAGAACTGGACGATCCGAGCCCGCAGCCCGATGATCCCAAGACGAAGCGCGAGATATTCTTCGCTGTGTTGGATCTACAGAACAAGTCTTTGTCGCACGAGACGAAGGAGCCACGAGAACCAAGCGAAATCAGGGAATCGAAAGAGATTAAGGATTTAGCGGATATCCCGAGTATCTTATCTGTTAGTCTGAATGGATTGCAGACCTTTCCTCGATCGGATGCGAGCACGCCTGAGAATAACATCAAGTTCAATCCGAATATTGGCTCTTCAGGTTCCTCAGGCACTTGTTCGTCCGAATACAATGAAGAAGAAGCGCAAGATGTCTTCACCGCGGAATTCCGGAAAATGAAACTAAAGGGCGAATTCCCATGTAGACTATGCACATCTGTATTTCCCAATTTGCGAGCATTGAAGGGACACAATCGCGCGCATATGAACGTGGAACCGGGTATGTCATATCCATGCAATATGTGTCCTTATAGCAGTACCGACAAGGGAGCTCTGATGAAGCATCTGAGATCGCATAACGGTGACAGGCCGTTCGAGTGCTCTCTCTGCAATTATGCGTTCACCACCAAAGCGAATTGTGAGAGGCACGTGAAGAATCGTCACGGAATGATCAGCAAGGAAGACGTAAAGAATGCACTAATCTATCATCCAAATGAAGATTCGACAAATGACAACATCGAAAGAAGCTCGCCTAGGGTCATTAGAGAAGATGTGCGGAAGACGCTTATTTATCCGAATGAACGCGAAGAAACTCCTCAACAACAAATACATTATCCGTCTATAGCGATGGATTGTAATTCTGGACCATCGAATATTCGCCCTGAGATACTGATGAATCGCTATGATAAGTCAGATACGTTCACCAGAGTGAAGATGCAGGCTCTTAATCTTGTCAAAAGAAACGCCGACGAAGCAAATCTGTCTCCGGATTTGCTCGTGAAATCTAATTACTCGAAGATCGACGACGATGTCGAGTCGGGATCGTCGGACGGCAGCGTGTCTCTAGTCAGTGATACCAAAACGGATACACACCAAAGAATTCAAGCTAGTCCGATGAACCTGACGAAGCCCTCGACAAGCTCTGGGTTGAGCTCGGGGGAGGACTGTCCGTTGGATTTGTCCATGGATGTGTTAGATCTGAGCAgaaagcgaaagagagaaaacgagGATTCTGGTTCGCAGGAGGAGAAGCGATTTAAGAGCAATCAACAGGAATTGTACGCCACGAATCCAGCGTTGCTGCTGACTCAAGCTCTGCTGAACAAAGCACGTGAGAGCTCACCAACGACGTCGCTGGAAACTCTTTATGCGAATACTATTTATCGCAATTTCGGCACGTTAACCGGTGCCGGCATGATACCGCCATACTTCCTCAGTCCTCATATGTTCGGCCAGGAATTAACGAAGGGCAGGCTGCAGAAGGAATTGGTTAGAGGTTTGCAGCTCACTGGTGGCGGCACACTTTCAGTGGATCCATCACTGCCCAGCACCAGTTACGCAGCGTATCCGCAAACAAGGGACACTCCGCAACCCTCGAGTGAGCAAAATGCTTACGCAAACTTGATGAATACGCAGATTACTAATCAGACCGCGCCGAGCCGTGAAAAAACAGATGCTATCCCGTCGAACGATCCCGTGAAGATGGTACTCAAGAACGGAGTGTTAGTCCTCAAGCAAAAGCAACGTAGATATCGTACCGAGAGACCTTTTATTTGTGAGCATTGCACGGCGAGATTCACATTAAGGAGTAACATGGAACGGCATATCAAGCAACAGCATCCACAGTATTGGAGCCAAAGACCTCGCGGTGGACATTCGACTAGGGGCCGACCGCCCGCAAGTCATCCAAATATGGTACAGGCTACTGGTCCATCGTCCTCGCAAATAGTTCAACCATATTCGAGCATTCTTCCGAACGTCGACACGCCGGGGATCACATCGACGGACTATGGCACACATCCTATCTCGGACCAAGTAAAATACGCGATTTTGGCGCAACAGCTGAAGGCCAATAAAATAGATGACAATGATTCAGACAACGAAATGGTGATAGACGAGGAGCCGGCCGATCAGGACGTTCAGGAGTCGCAAGCTCAACGCGAGCCTAGCATGAGTTTGTTGAGAGACCAGTTGGAAAACAGCGATGGTGTTAAAGATATCCTCGTAAAAACGGAAGCGGCCGAATCAACGGAGGAAACCTCGGAAGAAACCCACGGTGAACAGATCACACGGAATAACATCGACGCCGGCCTGGAAGAATCCGCAGCTGAAAGCAAATCAATACGCGCTGAAGAAATGACACAATCCACTGAAAAGGAACAAGGCAAACTTGAAGACGGAGCGCCCGACCTCGCTAGTGTCTCAAAGCTTTTGGACAATGCGTCTCAGCAATATCAGCAATTTCAACCGCAATATTTGAGTGACGAGGAGGGCCCCGTTGCGTCGACCAGCGGTAATAACTCCGGCAGCGAGAAGTCCGATTCCATGAATTCCTTGAACTCCGGGAATGATTCTTCGCCaaataagaagaagaaaaagaagaagaaatccGCGTACTCAATGGCACCGAACCGCGTTTCATGTCCATATTGTGACCGTCAATTTCCATGGACTTCGTCGCTAAGACGACACATTCTCACCCACACCGGCCAGAAGCCGTATCAGTGCATCCACTGTTCGCATCATTTCACTACCAAGTCCAACTGCGACCGCCATTTGTTGAGAAAGCACAAGGCGAAAGCGAACAAGATGCGCCGTGTCAGGAACTCATCCTCGCCGGACGTCCAGGTGGTCGCTAGCAGCAGCAGTAGCAGCAACGGCAGCAACACGTTCTCCATGAGGAATGTGCCCGAGAGGCCGTTCAAGTGTCATCAGTGCCCAAGCTCGACGTTCGCCACGTTGGGCAATCTGAAGAAGCACCGGTCGAGTAAACACCGCAAGAACGCGTCCAGATCGGAATCTAGCGATCAACAAAACAGTCCGCCTCAATGCCCCGCGCAAAATGACCAGAGCGATTACGAGAGCCGTTCATCGAGCATGTCCGACAACATGGAGAATACGTCGTCTGCCGTCGCAGTCGCGAAACCGACTTCTACCGTATCACCCTCGATAAATGACGCCACCAAATCGCGCAAATCACCAAGATTGTCACCGAGTCCCGGTGATCTACCCTTCAAATGTTATCTGTGCGACAGCGGTTTCTCGGAACGGCAAGACTGCCTGGACCACATCAAAGCCAGTCATAGTCGTTCGTACGATATGTTGAAGGCCAAAGGGGCTCTCGATATGGCGTCCATGAATATAGATGCAAACGAAGATCAGATGTTAGCGTCGCACCAACATCTCAGCGAcggagaagaaaagaaaggcCGTTTTCCTGATTACAGCAACAGAAAGGTTATGTGCGCTTTCTGCTTGAGACGATTTTGGTCCGCGGAGGATCTCCGGCGTCACATGAGGACCCACACGGGTGAGAGGCCCTTCGAATGCGATATATGCACCAGGAAATTCACGCTCAAACACAGCATGCTACGCCATCGTAAGAAACATGAGTCAGTGGACTCTGCCATGTATATAGCTAACAGCGGCGACGAGGACAATTCGCCCGCGCAACCACCAACGATAACACCCAGGAGTCAACAGCACTCGCCGATCTCCACCAACACCAGCAGGCCCCGCACCCAGGATAGAATCTCTTTGCCGACCGTTGCGGCGGTAGCAACGGCGGACGCGGCACCCTGTGCCTTGATGCGATACAATCACTATGATAACATGGCCACTCTCACCGGTAGAATGGCGAACGACGGTACCCAGGGTGTCGCATCCGCTCCGCTGCCTTCTCCGCCGCCTCCCGCGGAGATACCCAGTGAGAGCGGAGACAACGACTTGATCTCTAATTTGTTGGGTATACGCGAGAAAGGTTTGCTCGACAAGGTTCTTCTAAGCTCGGCGGATGACGCGGCGAAGTTGTTGGGGGTGAACCATAATGAG
Protein Sequence: MRRPSNAVRPSDENVDKCYCLGSICGSVWVSASGILMTGPENGPSQEQENETQIDAASPSSSVELSENGAHPCPTCPSVFSNSHELTNHLRGHNSPRSTDCSGEEDYSCSVCNKVLSSASSLDRHVLVHSGERPFKCKHCDMSFTTNGNMNRHVRCTHRMVSPNSCTDSKGSSGSERPAGTSQDEYNNNEIARHNSPDLIDDRQQPSPSNNRGNKRKCAEEDISDMEDQRRHKILLHNTKMSIRCRPEDEQKTFGCSLCSQDFASSATLESHMERVHPGSPATCETCNQSFKNHRALNLHRSMRHYKKNPEGNNSRSLRNTVDGFRDLTFIDFSSIKFPTIARAMCERELHRPASGEANRFQCMKCLHAFPCRQAQLAHEKECKGPYKNKRNSNDNNNNNDISTNNNLETELDDPSPQPDDPKTKREIFFAVLDLQNKSLSHETKEPREPSEIRESKEIKDLADIPSILSVSLNGLQTFPRSDASTPENNIKFNPNIGSSGSSGTCSSEYNEEEAQDVFTAEFRKMKLKGEFPCRLCTSVFPNLRALKGHNRAHMNVEPGMSYPCNMCPYSSTDKGALMKHLRSHNGDRPFECSLCNYAFTTKANCERHVKNRHGMISKEDVKNALIYHPNEDSTNDNIERSSPRVIREDVRKTLIYPNEREETPQQQIHYPSIAMDCNSGPSNIRPEILMNRYDKSDTFTRVKMQALNLVKRNADEANLSPDLLVKSNYSKIDDDVESGSSDGSVSLVSDTKTDTHQRIQASPMNLTKPSTSSGLSSGEDCPLDLSMDVLDLSRKRKRENEDSGSQEEKRFKSNQQELYATNPALLLTQALLNKARESSPTTSLETLYANTIYRNFGTLTGAGMIPPYFLSPHMFGQELTKGRLQKELVRGLQLTGGGTLSVDPSLPSTSYAAYPQTRDTPQPSSEQNAYANLMNTQITNQTAPSREKTDAIPSNDPVKMVLKNGVLVLKQKQRRYRTERPFICEHCTARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPASHPNMVQATGPSSSQIVQPYSSILPNVDTPGITSTDYGTHPISDQVKYAILAQQLKANKIDDNDSDNEMVIDEEPADQDVQESQAQREPSMSLLRDQLENSDGVKDILVKTEAAESTEETSEETHGEQITRNNIDAGLEESAAESKSIRAEEMTQSTEKEQGKLEDGAPDLASVSKLLDNASQQYQQFQPQYLSDEEGPVASTSGNNSGSEKSDSMNSLNSGNDSSPNKKKKKKKKSAYSMAPNRVSCPYCDRQFPWTSSLRRHILTHTGQKPYQCIHCSHHFTTKSNCDRHLLRKHKAKANKMRRVRNSSSPDVQVVASSSSSSNGSNTFSMRNVPERPFKCHQCPSSTFATLGNLKKHRSSKHRKNASRSESSDQQNSPPQCPAQNDQSDYESRSSSMSDNMENTSSAVAVAKPTSTVSPSINDATKSRKSPRLSPSPGDLPFKCYLCDSGFSERQDCLDHIKASHSRSYDMLKAKGALDMASMNIDANEDQMLASHQHLSDGEEKKGRFPDYSNRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFECDICTRKFTLKHSMLRHRKKHESVDSAMYIANSGDEDNSPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATADAAPCALMRYNHYDNMATLTGRMANDGTQGVASAPLPSPPPPAEIPSESGDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016049;
90% Identity: iTF_01355659;
80% Identity: -