Basic Information

Insect: Pseudoatta argentina
Gene Symbol: -
Assembly: GCA_017607525.1
Location: JAANIA010001848.1:7805741-7813282[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 4.2 2.4e+02 1.6 0.1 2 17 75 90 74 91 0.88

2 19 0.22 12 5.6 7.5 2 23 278 300 277 300 0.97

3 19 0.027 1.5 8.5 2.2 1 23 349 371 349 371 0.97

4 19 0.81 46 3.9 1.1 1 23 420 442 420 442 0.97

5 19 0.039 2.3 8.0 0.1 1 20 490 509 490 511 0.92

6 19 0.0008 0.046 13.3 1.8 1 23 551 573 551 573 0.98

7 19 2.6e-05 0.0015 18.0 0.1 1 23 620 642 620 642 0.96

8 19 0.0025 0.14 11.7 0.1 1 23 648 670 648 670 0.97

9 19 1.4e-05 0.0008 18.8 0.2 1 23 713 736 713 736 0.96

10 19 0.002 0.12 12.0 0.6 1 23 742 765 742 765 0.96

11 19 2.9e-05 0.0017 17.8 2.5 2 23 773 795 772 795 0.97

12 19 0.00011 0.0061 16.1 0.0 1 23 803 825 803 825 0.93

13 19 0.25 14 5.5 0.1 1 20 885 904 885 904 0.95

14 19 0.11 6 6.6 0.4 2 23 924 945 923 945 0.96

15 19 1.3e-06 7.2e-05 22.1 1.0 1 23 958 980 958 980 0.98

16 19 8.4e-05 0.0048 16.4 3.1 1 23 1002 1025 1002 1025 0.94

17 19 0.0015 0.084 12.5 1.3 2 23 1084 1106 1083 1106 0.95

18 19 0.00035 0.02 14.4 1.6 1 23 1124 1147 1124 1147 0.93

19 19 0.0034 0.2 11.3 0.3 2 23 1241 1263 1241 1263 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	4.2	2.4e+02	1.6	0.1	2	17	75	90	74	91	0.88
2	19	0.22	12	5.6	7.5	2	23	278	300	277	300	0.97
3	19	0.027	1.5	8.5	2.2	1	23	349	371	349	371	0.97
4	19	0.81	46	3.9	1.1	1	23	420	442	420	442	0.97
5	19	0.039	2.3	8.0	0.1	1	20	490	509	490	511	0.92
6	19	0.0008	0.046	13.3	1.8	1	23	551	573	551	573	0.98
7	19	2.6e-05	0.0015	18.0	0.1	1	23	620	642	620	642	0.96
8	19	0.0025	0.14	11.7	0.1	1	23	648	670	648	670	0.97
9	19	1.4e-05	0.0008	18.8	0.2	1	23	713	736	713	736	0.96
10	19	0.002	0.12	12.0	0.6	1	23	742	765	742	765	0.96
11	19	2.9e-05	0.0017	17.8	2.5	2	23	773	795	772	795	0.97
12	19	0.00011	0.0061	16.1	0.0	1	23	803	825	803	825	0.93
13	19	0.25	14	5.5	0.1	1	20	885	904	885	904	0.95
14	19	0.11	6	6.6	0.4	2	23	924	945	923	945	0.96
15	19	1.3e-06	7.2e-05	22.1	1.0	1	23	958	980	958	980	0.98
16	19	8.4e-05	0.0048	16.4	3.1	1	23	1002	1025	1002	1025	0.94
17	19	0.0015	0.084	12.5	1.3	2	23	1084	1106	1083	1106	0.95
18	19	0.00035	0.02	14.4	1.6	1	23	1124	1147	1124	1147	0.93
19	19	0.0034	0.2	11.3	0.3	2	23	1241	1263	1241	1263	0.96

Sequence Information

Coding Sequence: ATGGACGAGAACGTGGTGGAGATTGAAAACGAGGAGGCGATCGAGAATGTGAAGAATGTCTGCAGACTGTGCCTTTCCACGGATGGATCTAGAGCTTCGGTGTTTGGAACACAGGAGGAAGAGAAGGAGTCGTCGCTGACGAAGAGAAGCGTGTCGCTGGTCGCCAAGATTCAGGCCTGCCTGTCGATCCAAatttcgACAACCGATAAGCTGTCCACATGGATATGCACAAATTGTGTGAAAAGCGTTAATCAATGGTATACCTACAAGGAATCGTGTTTGCGTTCCCAGGACAAATTACAAGAATGGCTGGCAAATCAATTGCAGTCGAATCCTACAGTTGTTAGGATCAAAAATGAACCAATGGACATAGATTATGAAAATAGTGTAGAAATTATAGAGGAGACTGTCAATAATATAGAACATCCATCAGTTCAATCAGTGGAAAACAATGAAgctaataatgaaaaagtgcAAGATGTAGTAGACAGCGATGTTAATGATACTGCGAATGATACTAACAAGGACCCCGAATCAATCTCGTCCGCAACGGAAAAGGAAACTGATAAGGAAAAGAATCAAGCGGATCAGCAGGATTCTATAGTTCTGTGTTCCATTAAAAGCGAACCGCAAGATGAAGACGATACCGATGGTACCATAGAAATAGAATCGAATAGCAGTGAATTGAATGCCATGGCAGTCGATGAGGCAGAGGACACTGTCATGGAGGCTGATTCCACGCAAAAGTCTAATGCGGCTGGCGCATCGCCTAAGAAGAAATTCAGACGTGGTCCTCATACTCACTTCAGAGGAACGCGTGTTTTTAAGCAGAAGTGCACGCACTGCCAGATATTTTTGCATTCTAAATACTCGTACATGAAACATATGAAGAGATTTCACAGTAAAGAAAATGGCATTGAAAATTCAGAGATGCGGAACGACGACGAGGAGATGATAGAGGATCTAGAAGATGAATTGATCAGTATGGAGAAGGACTCGCCGCTGACGCAAGTTCAACAGGACATTATTAGTCAACTGAAAACTTTTTCTTGCTACTCTTGCGAGCAGACATTTAATGATCGACGCAGCACTCTTTCTCATATACGTCAACATATGCCGGATCTAAGACCATACACATGTATTGCTTGTTTGACAGAATTTCCAGATCGATCAATGTATCAGTTGCATTGCGGAGCTTCCTTCGAATGCGCCATGAAGATTGCCCTAGTTGTACCGAAACACGGTAGCGAGCGATATTTTACATGTAACATGTGCTTGCGTTCAATGCAAGGTAGAAAGGAGTTACTCAGTCATTTGTCGAAGCATTCTGATAAGCAGTACGAGGAGATGATGTCATCGTCAACGCGAGCCCCGCCTAAACTGAAGCCGATGGCACCGTTGCCATCCTCGAAAAACAGCACTCTGCATAAGAGCGGACCTTATAAGAATGGTGATCCAAAGCATAATCATGCCTGCGATCTATGCGGCATGATCTACCGATATCGGCCCAATATGGTCAAGCACAGAGAGGTATGTGCGCGATTGGACCCAGACAACAGAATATTGTACAAGTGCGTGCATTGTTACATGACGTTTCTTGTGTTTAAGAAGTTCCATTATCATATTACAGCCGAtcataagaaaaaagattttacttgTTCTGAGTGCTTTTCCAAATTCCGATCACCCAGCGATTTTGTAACTCATTACGAAACCCATCGCACGACAATGCAAGATAACCAACAAGAGCAGTATGACAGTACCTCGCAGAATACAGTTCAAACACCATTGAAGGAACGTAATGCTTACGAAACAAATGTCAAATCAAGAGTTAGTTCACGAATATCAAATCAGCAGTATCCTTGCCCTCTCTGTCCCGAGAAGTTCTCCACGAAGGTTGAACTGAACGAGCATCGGACTCTTCATCTCAAAATGAAGATATATTCGTGCGCCATTTGTCGTAGCTTATTCAGCAGCGCCGGCTCCTTGGAGATCCATATGAAGGATCATGGTATCGAAGACGCGCACGAAAGGGATGCCAATATCTCCTGTGTGGAATTCGGCAGCTTGGATGAAGATGTGAGGATTGAGAAAGATTTGGTGAACATCAGTAGCATCTCGGATCCTGGTCAAAATCATGAATGTGGCGAATGTGGTAAGGTACTATCCAGTTACGCTAATCTTCGACGACACGCTAAAATTGCTCACCGAAACACTAAGATCTATGATTGTGTCGATTGCTCGCGAATGTTTATGCGTAAAGATTTGTACGATACTCATATGGAGATCAAGCATAATTCTAAGAACACAATGCTGCAGTGTCCGCAATGTCCCAAGAGTTTTGTCTTCCATTCGAATTTCACTTATCACTTCCGTACTGCTCATCTCCAGAAATCACAAACCGGTTATGCCTGCGATATCTGCGGCAAAGTCTTTGTTGAGGAAGCgtctttaaaaatacataggGGCTGGCACAATCGCGCCAATTCACGTTTGAGTACTCGATTTATATTGGGAGatcaaaatatatctaatgACGCGCAAAAGGAATCAAGTAGCGTTGAATCTGTTGAGAATTCAGAACGGCCGGCGAGAGCACGAAAATCTTTCCCTAATCCACCACTTCAATCCTTAACAAAGACATCAGAGAATTACCAATGTCAAGTATGCAATGACAAATTCAATGATGTCATAGGACTAAGAACCCATTTGTGGGACGTCCACTGCGCTCGCAATAAACCAGAGAAGAGTTTCTCTAATGATGAGCTTCAATGCGAACTCTGCACGAACATTTTTCCCGATAAGGGAACCCTAGCATGTCATATGCAATGGCACAATGCTAATCCTATTCTCAGTGACATACAAAAAACGTTCTCCTGCGAAATATGCGGCAGGTCTTACAGTTCGAAGAAGGCTCTATGGAAGCACAAGAGACTTCACAAAGCTACCGCTGTAGCATCAATTAAATTCCAATCTTTGGCTAGAAAACCGATGGCTACACAATTCCTATGCAACTTCTGTCGCAAAGTCTTTTCAAGCAATCAATCTTTGCAACGGCACAAACTCACTTTCCACAGTGATCCGCTGAATCAACAACGTGCGCAGCAACAGTTATGCAACAGCAGTCAATTATTGTCATTTGATGAACCAAGAACAAAGCGCATGAAACCagacattgaaaatgataattcGCAGACCAAATTGTCGCCTTTCGCCATGGACTTCGCTGGCGAAAGAAGGAAACCGGTCATGTGCCATGTTTGCAAGAAAATGTTCCCTAACATGAGCGTGCTGTACAAGCATAAGCAAATGGTTCACAAACGATCAAGAATACCCGAGTGTATACCGATGTCGACTCAGGATGGCAAATTTTCATGCAACATCTGCTTCAAGAAATTCCCCGGTCTATCAAATCTGCGAcaacattttacaattaaacacAAGAAGACGTCCGAAACCAGCAGCAACGCATCAATGGCAGTGAGCAATGAGAGATTGTCACTCCCGACACCCGAACGTCCAAAGGAGGGAACCTATGAAGTGGCCTACAATAACGTGATGTACAGCTGTAAATTGTGCAAGCAGTGTCATGTTTTCAATAAGGATTCTATCATAAGTCATATCACCAATGTGCACAACGCAGTGTATCAGGCCGATAGCAAGACGTTCCATAGGGAAATCACTCTGAGCACTTACGTAGTAAAGGACGCGATCGGAGCTACTTGTCCGCGATGCGATGTTAAATATCCTAATAACAGGGCTCTGAAGATACACTATATTAAGTTCCacgaaaataatgat
Protein Sequence: MDENVVEIENEEAIENVKNVCRLCLSTDGSRASVFGTQEEEKESSLTKRSVSLVAKIQACLSIQISTTDKLSTWICTNCVKSVNQWYTYKESCLRSQDKLQEWLANQLQSNPTVVRIKNEPMDIDYENSVEIIEETVNNIEHPSVQSVENNEANNEKVQDVVDSDVNDTANDTNKDPESISSATEKETDKEKNQADQQDSIVLCSIKSEPQDEDDTDGTIEIESNSSELNAMAVDEAEDTVMEADSTQKSNAAGASPKKKFRRGPHTHFRGTRVFKQKCTHCQIFLHSKYSYMKHMKRFHSKENGIENSEMRNDDEEMIEDLEDELISMEKDSPLTQVQQDIISQLKTFSCYSCEQTFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYQLHCGASFECAMKIALVVPKHGSERYFTCNMCLRSMQGRKELLSHLSKHSDKQYEEMMSSSTRAPPKLKPMAPLPSSKNSTLHKSGPYKNGDPKHNHACDLCGMIYRYRPNMVKHREVCARLDPDNRILYKCVHCYMTFLVFKKFHYHITADHKKKDFTCSECFSKFRSPSDFVTHYETHRTTMQDNQQEQYDSTSQNTVQTPLKERNAYETNVKSRVSSRISNQQYPCPLCPEKFSTKVELNEHRTLHLKMKIYSCAICRSLFSSAGSLEIHMKDHGIEDAHERDANISCVEFGSLDEDVRIEKDLVNISSISDPGQNHECGECGKVLSSYANLRRHAKIAHRNTKIYDCVDCSRMFMRKDLYDTHMEIKHNSKNTMLQCPQCPKSFVFHSNFTYHFRTAHLQKSQTGYACDICGKVFVEEASLKIHRGWHNRANSRLSTRFILGDQNISNDAQKESSSVESVENSERPARARKSFPNPPLQSLTKTSENYQCQVCNDKFNDVIGLRTHLWDVHCARNKPEKSFSNDELQCELCTNIFPDKGTLACHMQWHNANPILSDIQKTFSCEICGRSYSSKKALWKHKRLHKATAVASIKFQSLARKPMATQFLCNFCRKVFSSNQSLQRHKLTFHSDPLNQQRAQQQLCNSSQLLSFDEPRTKRMKPDIENDNSQTKLSPFAMDFAGERRKPVMCHVCKKMFPNMSVLYKHKQMVHKRSRIPECIPMSTQDGKFSCNICFKKFPGLSNLRQHFTIKHKKTSETSSNASMAVSNERLSLPTPERPKEGTYEVAYNNVMYSCKLCKQCHVFNKDSIISHITNVHNAVYQADSKTFHREITLSTYVVKDAIGATCPRCDVKYPNNRALKIHYIKFHENND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00182140;
90% Identity: iTF_00016844;
80% Identity: -