Basic Information

Insect: Pseudoatta argentina
Gene Symbol: -
Assembly: GCA_017607525.1
Location: JAANIA010002843.1:1353062-1362626[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.025 1.4 8.6 3.1 1 23 1286 1308 1286 1308 0.97

2 19 0.0011 0.06 12.9 0.6 2 23 1345 1366 1344 1366 0.97

3 19 8.8e-06 0.0005 19.5 1.5 1 23 1433 1455 1433 1455 0.98

4 19 0.00044 0.025 14.1 1.3 1 23 1458 1480 1458 1480 0.98

5 19 3.3e-06 0.00019 20.8 1.5 2 23 1527 1549 1526 1549 0.97

6 19 0.029 1.7 8.4 2.9 1 23 1555 1577 1555 1577 0.95

7 19 0.0051 0.29 10.8 0.7 1 20 1583 1602 1583 1607 0.93

8 19 0.0018 0.1 12.2 2.1 1 23 1674 1696 1674 1696 0.97

9 19 0.0005 0.028 14.0 4.7 1 23 1750 1772 1750 1772 0.97

10 19 0.00058 0.033 13.8 0.6 1 20 1777 1796 1777 1798 0.94

11 19 0.061 3.5 7.4 0.3 2 23 1809 1830 1809 1830 0.97

12 19 3.7e-05 0.0021 17.5 0.6 2 23 1869 1890 1868 1890 0.97

13 19 3.3e-05 0.0019 17.7 1.5 1 23 1895 1917 1895 1917 0.95

14 19 0.0015 0.083 12.5 1.7 1 20 1923 1942 1923 1945 0.93

15 19 1e-05 0.00057 19.3 0.5 1 23 1961 1983 1961 1983 0.95

16 19 4.9e-07 2.8e-05 23.4 0.6 1 23 1989 2011 1989 2011 0.99

17 19 5.3e-05 0.003 17.0 0.2 1 23 2017 2039 2017 2039 0.97

18 19 0.031 1.8 8.3 6.9 1 23 2045 2067 2045 2067 0.96

19 19 0.0066 0.38 10.4 0.6 1 20 2073 2092 2073 2094 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.025	1.4	8.6	3.1	1	23	1286	1308	1286	1308	0.97
2	19	0.0011	0.06	12.9	0.6	2	23	1345	1366	1344	1366	0.97
3	19	8.8e-06	0.0005	19.5	1.5	1	23	1433	1455	1433	1455	0.98
4	19	0.00044	0.025	14.1	1.3	1	23	1458	1480	1458	1480	0.98
5	19	3.3e-06	0.00019	20.8	1.5	2	23	1527	1549	1526	1549	0.97
6	19	0.029	1.7	8.4	2.9	1	23	1555	1577	1555	1577	0.95
7	19	0.0051	0.29	10.8	0.7	1	20	1583	1602	1583	1607	0.93
8	19	0.0018	0.1	12.2	2.1	1	23	1674	1696	1674	1696	0.97
9	19	0.0005	0.028	14.0	4.7	1	23	1750	1772	1750	1772	0.97
10	19	0.00058	0.033	13.8	0.6	1	20	1777	1796	1777	1798	0.94
11	19	0.061	3.5	7.4	0.3	2	23	1809	1830	1809	1830	0.97
12	19	3.7e-05	0.0021	17.5	0.6	2	23	1869	1890	1868	1890	0.97
13	19	3.3e-05	0.0019	17.7	1.5	1	23	1895	1917	1895	1917	0.95
14	19	0.0015	0.083	12.5	1.7	1	20	1923	1942	1923	1945	0.93
15	19	1e-05	0.00057	19.3	0.5	1	23	1961	1983	1961	1983	0.95
16	19	4.9e-07	2.8e-05	23.4	0.6	1	23	1989	2011	1989	2011	0.99
17	19	5.3e-05	0.003	17.0	0.2	1	23	2017	2039	2017	2039	0.97
18	19	0.031	1.8	8.3	6.9	1	23	2045	2067	2045	2067	0.96
19	19	0.0066	0.38	10.4	0.6	1	20	2073	2092	2073	2094	0.90

Sequence Information

Coding Sequence: atgGAATTGAAGACAAGACAAACGAGAAAGCTGCTGGAGCTTTTGGAGCAGCAAattaacaaattatatttattgctgATCACTGTTTCTATTAATCCATCAGAAATTTTGGTTACGAAATCATTACTCCATGAACAACTGCATTTTTTAACTCAGAGATTCAATAATTTAGGCGATGATAATTGCGACTGTGAAGAagcaaatgtaaaatttgctGATACAGtaacaaatttgaaatatacttctctattgaaaaatattgatgagCTTatatttgatattattaaggCTATTAAATGCGATAATATTGATAGCAATGCAGCCAGACATAAGACGGAATCattgcttaataattttacatcagCTTTACGAGTATTGGAAGATTTAGAATGCTTGCCATTGAAGCAGAGGCTTCAGGATTGTCTGGATTATGTTAAAGAGATGAGCACAGCAAACGAGATTGAGgatcttcaaaatataaagGAATTAGGCACTTCGATATTAGAGATACTCGAACCACTACAGAATTATAGAAAAAGTTTAGCGTCTGCTTTTCTATCGCAGAATCTAGCTTTATATACTTCTCAATTATGCACATCATTTGAAATGCTAGTACAACTGGCTCAGGAACAGCATCAGTTAAATGCatcaatttatGCTTGCAAGAAATATGTTTGTGAAAGAATATGCACTTGTTGTGAGATGATATTGAACTTGATGAATGACTCAAATCCATTGCTGGAAAAGGAAACTTGCGAAAGGGAGAATCATTTTGTTTACAGAATGGATTTGGCATTAGAcgttatattagaaataccgAGTAAAACGCATGAACAGCAGCTATCTGAATGTACCACGGAACTGTGGTTGAGACTGGAGGACGTATTCTCTCATGCTATGGCAATTACTCAAGTGTGTCAgccatataattttaaagccATAACTGGTTCATGTCAATCCATAGTGTTGGAGTACGAGAAATTAAAGCAGCAATTACTCTCGGAAACCCCAGATCCGgcgttaaataatttgttcatGCATACATTGACCGACGCTCTTTATCGTTTGGAACGTAAAGTTAATATAGCGGTACTAACGCTCGCAATGGAAGTATTCAGCAATCCTTACATTACTTTGAAAAAACTCGTTATGACGTGCGGAAATTCGTTAAGCGCGAAAAGAAGATCGAAAAGTGATTTAAATGATCTCATAGAAGATTTTGACCAATTCTTTGATCAAACTATGCAAATTGGAATATTTGCGATCGCTTGTTGCAAAGACAAGAACCGCAATAACAAAATTCGTAATTGTCTCGCAGGATTCGAATCCTTAGAAACTGAATTAATTTCTGCCATAATTTCCTTCTATTTACATCCAGATAACAAAGAGATGCGTTCGAGTGTTAAACTGTTGACTATGCAATGGCAATTAGAAATGAATAAGTTTCAGAATGCTGTAAATCTCATTATAAACTCGGCTGCTTTCTGTcaaGTAGTTATGGATAGTCTTCAAGAACGTATAACGGCAATCTCAGATTGTCTGGATAACAGAGAGCCAGTAACGCAACTTCAAGTGCAAGGTATTGTTCAGCGTGCTTCAGCTTTGTCTAGTCAAGTCACAGCAATTGTAAATGATATTGGCACTGAAAACATTGATCGTCAAACGATAATGATGACAAGAGAATTGAAAGCAGCTATATTTGAAGCCAACACCGCTGCCAAAACTCTTCTGGTGGAGAATGCAACGGAGCCTCAACAATTGCGAGTAATAAAACGATgtgaattaatattgaatgttGTTCAAAGATTACAGCCTGCTTTAGCTACAATTATGAACAATACAACGCATGAAAAAACTGTGAGAGGTCAAGGAGATTCCATTCATGGTAGCATATCAAATGCCATGAACTTTCCATTCACAATTTATGGTTTGCCGCGCGATGAAAATAGTCTAGTTTATATTAGAACACCCTATACAGTAAAAACACATAAATCACAGGTGTCCATTCAACCGGCAAACAGTACAGTGCAGAAACCATCGGATCTGTCGTATTTGATACCTTATATAAAGAACGGCCGTACATTGCGTAGTGATCACTCCATCATGTATACACcgcataaaaacaaaaatgtaacagAGGCAGCCGTTAAGAATGAGATGTCCCTTAAGAATCTATCTAGCATTAGACAACATCTTTTTAGCAGAGATAGCTTCAGCATTCACGTCGATTTTGATATAGCCGAAGAGAGCATGGATTTAACAGCTGCTTTAGAAAAGATAACTTCATCGTCCACGTCGGAAAATGCAACGTTCTCTTCATGCCAGTTCTCAAAAGTAGAAAATGTATCTTCGGGAAGTGTAAACAAGGAATTGGTTTTCAATATCGTAGAAAAACTAAGTCAAACTGTTAGACCAGAAACGGAAAGTTTGAGCAAATCCGCGATAACGGAGAAGATGAGTGAATGTGCCATATCTGGTGGCGGTGATGCGTCCTTAATCATGGAATCGCGTCAAAAACTCAGTAACGTTCGATCTCCAGACAATAAGATACAAAAGTCAACCTCGGGGCAACATGAGTGGTGGGTGAAAAAAGACGGTGTGCTGGATCAGCGAGGAAGAGTCGATCCAAGTCAGTTCGCCGAGCAAAACATGGACGCCGTGGCGATACATACGTCGGATCCGCCGCAGGGCGAGGATGCGATCACGTCCGCTATGAAGATATGCCGCATCTGCCTGCTCGACAATCTGATGATGCGCGATCTCTTCGCAGAGAGCGAGGTCGCGTCCCTATCGGTGAAGGCAATGAGCTTCGCCAACGTTAAGATGTTACCAGGTGATGGTTTACCAACACAGGTGTGCTGTATGTGCGCCGACAAGTTGGAATCGGCATATGAATTTAAGTTACAAGTGGAGCAAGCTGACAATGTTCTTCGAGAAAAGCTTGTGGGAGGAATAATAAAGGACGAATTGTTTCTTAATGAGGTTGAAATACACTTGGATGCcgaaaaaaataatggttTGGAAGAGATGAATGACAGTGCTGATTATGAATCTCCTGGTACATTGCCAGGTGAAACAGAAACTGACAAGAACTTtctgaaaaatcaattaattattttggaagCTGAAAAATTGGCAGAGACAGATGGAATACAACAAGATTCAGAACAAGATAACTTGCAAGAAAGCATTGAGGAAGAATTGCAGCAAGAATTAGCCAGCTCAGAAGACATGTCAGATGTTATTGATGAATCTAGGGATGAAATATCTTCCAACGACAAGAATATTATTCGAAGTTGCACAGATACAATTCCAACAGatgaacataattatataatgcagCAACAGTGTATTATTTTGCATACTGAACAATTCTCCttccataaaaaaatgcaGGAGACCGTACCagaatttaaacatataacgAAATACGAAGAATCACTATCTGAACAAAATCAAGAAAATCTATCTGAACaaaatcaagaaaatcaatctgAGCAAAACCAAGAGATTCAGGCTGAACAAAATCAAGAAATTCCAACTCAGCAAATCCACGAGACTCTGGCTGAGCAAATTGAAGAGACTCCAGTTCAAAATGCTCAAGCTGAACAGGAGAATCAAACTgaacaaaatcaaaataaaaaaatggaattattacAGAACgaagtattaaataatgatactaATGAGCCAGTCGTGGAAGAATCACCCCAGAATGAAACTAGAAGAAGTAAACGTAGATTGGCTCGTCGGACATTCACCGAGCGAAATTCCGATGAggagaattattttgaaaatctgaatctcAGTTCACGATTGAAAAAAGTGCAGGCAGATAAGACAGAGAAGATCTTTTTCATGTGTTACTTGTGCGATAAACAGTTTCTTTCAAAGAGCGTCTTGAAAGAGCATATGCATTCCCATGAAGAAGTAAGGAAAACATTGTCTCTGAAAAAAACGCCGGAGAAACTGCAGAAGGTGCAGACCAGCGTTTCCGCTGTGAAAACGCCGGAATCAGGAAGGAAAGCCAACAAGTGCCCTTATTGTGGTAAAgagtatatgtacataatctcGTTTACTAAACACATTAAGCAACACGAGCGAGAGGGGCAGGAAGCGAAGGAAGATTCGATGTCGTTTGAGATGTTTCATGAGGATGAGTACAGTCTAGACTTAGATAATGACAACAAATCGGATGTTGAATGTAGAAAACAAAAGAGAGGAAGTATAGTATACGACGATGTTGCAAGCGACAATGATcaggataaaaaaagaaagcgtAGTCTTATTGAGGAGTTTACGTGTAACAAATGTCCAGAAAAATTCGATACAAAGCGAGGTTTGCAAAAGCATTTGCTCACGCATGTTAGCTTCAAGTGCAGCGTGTGCAACGAAGAATACGACACTCTAGAACAACTAAAAAATCACCGAACAAAGCATGTGGTCGAAGGCGTACTTACTGAGCAAGACTTGGAAGAAGATATGAAGCAAATGATCAAATGCGAGGAGAATGATGACAATAGTAAGAACATTAAAGATGGAGAGAACAGTGAATCCGCCGAAATCACGAAGGAACTAAAGTGTTCGATATGTTCAATAACATTCTCACGCAAGAAAGCGCTCTCCAGACACATGCAGACAACACACTCCGACACCCATTCTTACGAATGCAAGATATGCTGTCAACAATTTGCACGGAAGGATTTCCTACGCAGGCATGCCGAGCAGCATGCACGAGTGAAGACTTACAAATGTACTCAATGTAACAAAACTTTCGGCAATGAGCTCACGATGAGAAATCACCTGGTTGCCACAAATCACAAGACATTTATACAGGGACAGGAATACGATCCCAATAAGCGTATAAAACGCGTGGCGGCGAGAGCAGCACAGAAGATCATCGACAAGATCAAGACTGAGGACGGTCTCGAAGATTACGATGACAATACCGATTATGATGTTAAATTGGACAAGCATTATGTTATTAAGCACGACGCAAAGAAGTACAGGTATAAAGAATTTGAGTGCGCGACCTGTAATAAGAAGTACTGCTTGAAACAAGCATTGGCGAGGCATATGGAGCAACATGTAAAGAAGGAAAAGGCAGAGAAGACAATGGAGAAAGCGGCGGAGAAGCAGAAGAAGACCGCTTTAGAGAAGAAAGAAGCGCAGAAGAGCAACACGGATGATAACGATGGCGATAACAACTCCGACTTTGAAAGTGGTCTCGACTGGCCAGTAGACAGTCATGAATGCACCACGTGCAAGAAGCAATACAGTACGAAGAAGTCGTTACTGCGCCATCAACTACTACATGAGGAGCCAAATTTCGAGTGCGATATCTGCAGTATCAAGTTCTATCGAAAAGACAAACTGAAGGCGCACTACGATAAGTGCGCGGAAAAGAATCCTGATCAGGTGAGGAAGTGCAACATCTGCGGCGACAGTTTCGAAAACAATGAGATTCTGCGCGAGCACAGGGCCAAGCACGTTACCGAGGGTATCCTAACGGAGGAGGATCTGAGAGACACCGAGCCAAAATCCGAAGAAAAGAGactaaatgataaaatgacTCGGAAGAGGAGGACCGATATTGTGGGGCTCGAGTGTACCGAATGCAACAAACAATATACCTCTAGGAAGGGTCTGCTGCGACACATTCAGGTTCACGAGGGCAAGAAGTATCTATGCGAAATATGTCCAAAGAAATTCTATCGGCGGGAACACCTGAAGATTCACGTGGCAAAACACAACATGATCAAACCATACAAGTGCACTCGTTGCTCCAAACGGTTCATTAAGGAGGAGCAGCTCAATAACCATCTACCTAAGCATGATCGCACTTTTAAGAAGAACAAGGAGACCGATAGCTCAAAGAGATTCCTCTGTGAGATCTGCAGCAAGAGCTTTACGCAGTCAACAACGCTGCTAGCGCATCTGCGTGCTCATAAAGGTATCAAACCGTATGTGTGCGAAGTATGCTCCAGGCCATTCACCACTAATGCCTACTTGAAGATGCATAtgcgcacacacacgcagGAACGTCCGTACATCTGCCAATATTGTTCGCGAGCGTTTGCCCGTGCCGACACCTTGGCAAATCATCTGACGTCGCATACTGGCGAAGCCAAGTACCACTGCAAGTGCTGTCCAAAGAACTTCCGGCGATTGAAATCATTGAAGGAACATATGTTTATTCATACGGGTCAACGACCTTACGAGTGTCCAACTTGCGACAGAAAGTTTAACAATAACGGCAGTCGCTACGCGCACAGCAAGCGCTGCAAACAGAATCTTTTGCAGGATCAGAACCGGGCGCAACAGGTGATTCAGCAGAcacagcagcaacagcaacaacaacagCTACAACATCAACATCAACATCAGCCACAGCAAGTGCAAATACAGATGCAGCCAGAACCGCATCCAGTTAGGTTGCATCAAACCACGATCGGTCAGGCACAAATAATCAAGGCGcaaaacattaaaacaatCGCTATAGCGAGACAAGCTGAGCCTATGGTAACTACGCAACATCAGGTTATGCAGCATCAAGAAATACTAATGCCTTTAATCCTGCCACTTACCGTCACTCTTGCTGATGTAGGCGAAGAGGTGATACTACCTGAaggtacaaaaatatttaccacTTCT
Protein Sequence: MELKTRQTRKLLELLEQQINKLYLLLITVSINPSEILVTKSLLHEQLHFLTQRFNNLGDDNCDCEEANVKFADTVTNLKYTSLLKNIDELIFDIIKAIKCDNIDSNAARHKTESLLNNFTSALRVLEDLECLPLKQRLQDCLDYVKEMSTANEIEDLQNIKELGTSILEILEPLQNYRKSLASAFLSQNLALYTSQLCTSFEMLVQLAQEQHQLNASIYACKKYVCERICTCCEMILNLMNDSNPLLEKETCERENHFVYRMDLALDVILEIPSKTHEQQLSECTTELWLRLEDVFSHAMAITQVCQPYNFKAITGSCQSIVLEYEKLKQQLLSETPDPALNNLFMHTLTDALYRLERKVNIAVLTLAMEVFSNPYITLKKLVMTCGNSLSAKRRSKSDLNDLIEDFDQFFDQTMQIGIFAIACCKDKNRNNKIRNCLAGFESLETELISAIISFYLHPDNKEMRSSVKLLTMQWQLEMNKFQNAVNLIINSAAFCQVVMDSLQERITAISDCLDNREPVTQLQVQGIVQRASALSSQVTAIVNDIGTENIDRQTIMMTRELKAAIFEANTAAKTLLVENATEPQQLRVIKRCELILNVVQRLQPALATIMNNTTHEKTVRGQGDSIHGSISNAMNFPFTIYGLPRDENSLVYIRTPYTVKTHKSQVSIQPANSTVQKPSDLSYLIPYIKNGRTLRSDHSIMYTPHKNKNVTEAAVKNEMSLKNLSSIRQHLFSRDSFSIHVDFDIAEESMDLTAALEKITSSSTSENATFSSCQFSKVENVSSGSVNKELVFNIVEKLSQTVRPETESLSKSAITEKMSECAISGGGDASLIMESRQKLSNVRSPDNKIQKSTSGQHEWWVKKDGVLDQRGRVDPSQFAEQNMDAVAIHTSDPPQGEDAITSAMKICRICLLDNLMMRDLFAESEVASLSVKAMSFANVKMLPGDGLPTQVCCMCADKLESAYEFKLQVEQADNVLREKLVGGIIKDELFLNEVEIHLDAEKNNGLEEMNDSADYESPGTLPGETETDKNFLKNQLIILEAEKLAETDGIQQDSEQDNLQESIEEELQQELASSEDMSDVIDESRDEISSNDKNIIRSCTDTIPTDEHNYIMQQQCIILHTEQFSFHKKMQETVPEFKHITKYEESLSEQNQENLSEQNQENQSEQNQEIQAEQNQEIPTQQIHETLAEQIEETPVQNAQAEQENQTEQNQNKKMELLQNEVLNNDTNEPVVEESPQNETRRSKRRLARRTFTERNSDEENYFENLNLSSRLKKVQADKTEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKTLSLKKTPEKLQKVQTSVSAVKTPESGRKANKCPYCGKEYMYIISFTKHIKQHEREGQEAKEDSMSFEMFHEDEYSLDLDNDNKSDVECRKQKRGSIVYDDVASDNDQDKKRKRSLIEEFTCNKCPEKFDTKRGLQKHLLTHVSFKCSVCNEEYDTLEQLKNHRTKHVVEGVLTEQDLEEDMKQMIKCEENDDNSKNIKDGENSESAEITKELKCSICSITFSRKKALSRHMQTTHSDTHSYECKICCQQFARKDFLRRHAEQHARVKTYKCTQCNKTFGNELTMRNHLVATNHKTFIQGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDNTDYDVKLDKHYVIKHDAKKYRYKEFECATCNKKYCLKQALARHMEQHVKKEKAEKTMEKAAEKQKKTALEKKEAQKSNTDDNDGDNNSDFESGLDWPVDSHECTTCKKQYSTKKSLLRHQLLHEEPNFECDICSIKFYRKDKLKAHYDKCAEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDTEPKSEEKRLNDKMTRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCEICPKKFYRREHLKIHVAKHNMIKPYKCTRCSKRFIKEEQLNNHLPKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLLAHLRAHKGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQDQNRAQQVIQQTQQQQQQQQLQHQHQHQPQQVQIQMQPEPHPVRLHQTTIGQAQIIKAQNIKTIAIARQAEPMVTTQHQVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00015546;
90% Identity: iTF_00015546;
80% Identity: -