Pare003138.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudoatta argentina
Gene Symbol
PAXBP1
Assembly
GCA_017607525.1
Location
JAANIA010001575.1:1120499-1136671[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-30 1.8e-26 92.4 3.2 2 272 508 717 507 719 0.91
2 2 0.87 4e+03 -3.8 0.0 50 90 1147 1187 1138 1191 0.59

Sequence Information

Coding Sequence
ATGTCATTATTCAACAAGCCGAAGCGGAACATACGCCGACGTCCTTTCGACGATGAAGACGAGGATAATGAGAACAGAATGGAGGTGGAGGACGCACAGCCGGTCAAAGTTAAAACGAAGAAGGATAAACCAAAGCAGACGCGCCTCAGCTTTGGAGAGGAGCTGGAACAAGgTGACGACGGAGAAGTTTTTATAGTCAAGAAATCGTCGAGGAGCAAAAAGCTGATGAAACAGCTAGATCAcgaaaggagaaaaaagaaaggtgAAGAGAAAATGCAAGTGGACACTGAGCAAGCGAATAAATCCATTAAGCAGGAAAAagatttagaaataaagaCAGATGATCTAGTAgttaaaataaaaaacacagGACCTCTGATTTTAAACGGACGAGCTGCATTGGCAGCAGGAAAAGATGACTATACATCGGGTGAGGAGGAAGATGAACCTTGCAGTCACAAATTTAGGAAAAATACAGATAAAGCTGAAGCTGTAAAAATACTTCTTGAGAGTACcgATGACAAGGGCAAGTCAAGACTAATACGAGAGGAAGACCATGATCGAAGTGACGATGATGATTCTCAAGATCGACTAGACATGACTGTCAACACTGAAGCAcgtgataaagaaaaaaggagagaagCATTTCTTGCTTCTCAAGTTCCATTAAAATtttcagATAATGAAAGTGAGCACGAaaacgaagaagaagaatGGGAAGCTCAACAAATACGAAAAGGTGTAACCGGTGCTCAgATTGCAGCAGCACAGCAAGATTCTATGTTGCAACAACAATATACAATGGGCATGAATGTTAATCAGATAATTGGGTCTGGTGTACCTTTAGAAATGGTATTAATGCCTGCACCACCACCGCCACCATCTATTCAACCACCAGATCCAACAAAAATTGTACCTGTTACTTCGCAAGAAGTTGTAAACAGGATGCGCACAAGgtTGGACAATTTGAAAGAGGTGCATAGACGGCATCAGCAAGATCAGGAGCGTTTAGAAGGAGAATTACAACAAACCATAAAAGAATTGGACGAAAGTGAAGTTCGTACGCCGCATTATGCACAACGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTTCCCCTGGTCATCGACTTGGAGCAACGCTGGTTAGATCTATATGGTGAACGTTCAGTCGAATTGATGGAACGAAGACGACAAGACACGAGAGATCAGGCGGAAGAAATAACTACTACAGCAAGAGGTCAAGCCATAAGAAGAGGACCAGAAGTAGAAATACACGTACGACGAGCTACAGAGAGAGAAGGTAGAAGAGCCCGTCGTAGAAGAGCAAGAGAATTAGCATCAAATATTCCAAAGCACATTGATGGCATGTCTAGTGACGACGAAGTTACTGAGCAACAAAATCTTGTATTTAAGCAAGCGAAAGatgaaatcgataataattgtaaagatatattttctgaTGTTATGGAAGAATATTGTACAGTACGTGGTATCCTTTCAAAATTCGAGTCATGGAGAGAAACAGACATGGATGCCTATACAGAAGCTTATGTATCGTTGTGTTTACCTAAAATTATTTCGCCTATTATCAGATTACAACTACTTACTTGGAATCCGATTATGGAAAGCGCTGATCTAGAAAGAACAAAGTGGTATAATACATTACTTCTGTACGCTTTAGATAGTAAAGAGACAGAAGAATCATTGAAACGAGATCCAGATGTTAGATTAATACCATccacaattgaaaaaattgtgataCCAAAATTGACATctaTTATTGAAAAGATATGGGATCCAATGTCAACGTCTCAGACGTTACGTCTCGTTGGAACTATAAATCGATTGATAAAGGAATATCCTAATTTAAATGATAGCAGTAAACAGTTAGAAACTTTATTCAACgctattttagataaaattaaagctgCGATTGAAAATGATGTTTTCATACCTATTTTCCCAAAACAAGTTTGGGATACAAAACATCAATTCTTCCAAAGACAATTTGCGATGGCTGTTAAATTATTGCGCAATTTATTAAGTTGGCAAGGTATTCTTGGggatatacaattaaaaaatttggcaCTTGGTTCGCTTTTGAATCGTTATCTGCTCGCTGGATTACGCGTTTCTTGTCCAACTGACGCTTTATTCAAGGCAAACATgATTATGAGTACGCTACCAAGAGCATGGCTGCAAGGAGAAACTATTGAACATCTCAAAATGTTTGCCACACTTATTCAACAACTTAGCGAACAATTGGATCAGGCAAACCCTGCACATAAtacCGAGATTGTCGCGCAAAGTTTATTCAGGTCTgggaaagaatatatatattcttacaaCACTATATCGAGCACTGGTGTATTAGTGCCTTCCAACGCAGCTTCTTCGTGGAATCTCCATGGAAAACTTGTAATTCATACGGAAGATGACTTTGTCACAATACagttgCAATCATTGAAGACGAATATGCATAATGGAAATGTAAAGAAAGTGATAGAAGATATTGATATCTACGATGATGCTGTAGAACTTTTGAAACCTTTCCGTTTATCGTACAACAAAGGTCTTATCGAGAACTTCAGCACTGAAACTGAGCCTAAGAATGTCGTGGAAGACATTAATATAACAAACCATTATGGAAAATGTGATATTGATTACATTGTAAGTCCGGAAGATGATAGTCGTTTGATAAGAAAATCGTTCGATCCGCGGATGTGTATTGGACATCCTAGTCGCTACTGGTCGAACGTTCCTAAAGTACAATGCACTGATGATGATCAAaaTCCCATCTTGAAAAGTAGCGAGAGaatgtatcaattaaaaaCCGATGGATTCGTTCACAATATTATCTCCGTAAATGCATCTGGAGGTATCTACGTGCAACCTTTTCAAAGCATGGGAGAGGCGCAGTATCATTTCGTTCgACAAACTATTGAATTAGCTTCAGTGAAAGATATAGCGAATaagataattacaaataatttacgaaCTACAGTCCTTCAACACGAGCTACCAGAAATAGATCTTACACAGGGTAGAGGTACACcggataaaaatttcatttttaaatctATAAGTCATTTATTAGATCGTTTAAGCCACAGGCTCGAAAATCCTGGTTTAGATACCGAAATTCATAATTTGCACAATACAACGATATCTGTGCTTCTCTATTATCTTGGTATGTTAGATCGGGTTGACTTAGGAAAGGCCTACACTCGCATTTCAGGAACTAGTTATAAAGAAGAAACGATAcgAAACATGTTTCTCGAGGCGCTGCCGCAAGTCGGAAGCAGAGAGTCTGCGCTTTTTATATTAGATCTTGTTCAAGGCAATGAAGTATCCGACATGTCTGCGATTCAATTACTTATGCGGCTACcgtttcacataaaaaaaccCGACGTTCAACTGCTGGTCAGTCTCCAACCACTTCTTGCGCTGCCGAGCAAAATCTGCGCGGAAGTGCAAAATACTGCAATTCTTACTTATGGaacattaatatacaaaacttGTCTAGTGCATTGTCCGTATGAGATGTTAGATGATTACGTACGCTTGTACCTCGATAAATTTACTGAAACTACTTTGTATGAACAGAAGATGATTTGGTTGGAAGGTTTGGCGAACATACAGCTGGGTAAAGTCGTCGAGTTTTTAGAGCCTATAGCTACCGGCAATAATGCTGAATCGCGACATTTTCGAGTACTTGCGGCTTGGGCTTCTATTCCCACAGCACCGTTGAGACCCGATGTTatttatcCTGTATATTGGCCGATCTTGCTCAATAGAACCGAACATTTGGAGATGAGGGTCGCTGCACTAACTTTGCTTATTGTTTCCAGTCCTACACCAAACAGATTGATTTCTCTGTATTGGTACATGCAAAACGAACCCAATCaacacttatataattatttttacacgatGCTAAAATCTATGGAACGCACCACGCATCCCTGTTACAGACGCAtAAGCAAAATCGCGGCTCAATTCAGCCGGGTACTTCGGGTACcgaataatgaatatatgatTACTGGTAATTACTTGATTGATTACCAAGATTCTTTAAGAAGATTTGGCGCTATGCTGCATGGCATTATCATAGCCAATCCCTCTACGAATATTCCTGAAGTAATATAcgtaactttaaataattatgctaGTGGTACGCACCTTAATCATGTGTCttTATATATCAAAGCGGAGGGTATTTTCCACTCATTAGCAACTTCCTTTGACAACCCGACAAACATAAAAGATATTCTGAAAGAATTCAAACTGGATGAACGCATGAAAGGCCCTAtgcatttagaaataattacacGTATTCAAGAAAAGACAGTATTGTGCGTTCACTggaatgaaacaaatatagtTGAGGGGTTGAAGTacTTGTCCTCTTTATCGGATAACATATATCAAACGTATTATAACATGGAGTTTCACGTTAATCAACAACGTATAAATGTGCCATTGGCGATAGAATCCGTGCAAGTAACCGATTTCGGTACCAATGTTAGACTCGCGATGACGGGAACTTCTCTGTTTTCAATGAGAGGTAATTTTACACGTGATTTTCCTGGACGGAACAACCATATTATTTTGCGcacATCTGTTCACGGCATTGAAACAATAGAAAATTACAATCCGCTAGTTGATTTATGGCATAGCGCTGAAAGAGTTCAGTCGCTACATGGATATCTTCCTATTAACGTTACACTTGGATTGGACGAACGACCATTCATTTCGTACGACACCCTAGAAGAACATCTTAAAACAGGAATAACAGTACATGCTAGAACGCTCACGAATATTAGAGGTGCTAATGTTCGATCAAAGTTAAATCGAGTTTGTCGTTCGTGCTCCGTATCACATACAGTTGTAAAGTCGCCGTCCTCTGATCTACagACGGTGAATATTCTTAATGTTGGGCTTCCTGAATTAGGTGGTCGAttacaagtaaaaatattcgatTGCGAAAGCATGATATCGtatgaaacattaattaatgacATTTGGTCCTTTCATCGAAGCAATTATcaaaCATGGCCAAGTATGAAATTCGTCTTAATCGGATTGCATTTCTTGGATTACTTCACTTTTGTACCGCCAAAAGGTAGCTGCGGATTAGCTGCTTATATTGAAGCACTCAAATTCGGACCGTCACAGacGAAATTGGAATacataaaaagtgaaaatcgtcatattttatctttgacGCACCACGATCTGCAGTCCTCACAAGTTCTTCATCAATGGAATCTAGCTGGATTGTACGAAGCCACAAGTTGGTTATCAGAtgcgattaaatttaaagcaaCTAAGATTGTGCCTAATGAACGTGTACTTAAGTTTTGCGTAGAGGCTGAAAGACACATGCCATGGCAATGGGAAATTTTGAGTAACGAACCGAGTGAGTCCTAtcgcattaaattaaattttatttgggGATTGTCCGATACTGTGAAAGGAAAATGTAGCGGATCATCTctatcgattaatttaattggtgAAATTAGTAGCAAGCAGCTCGAAGAAAGTAAAAGGGCAAGCTGGCCTTACGGCGAATGCAAAAACGAGTCTGAGGGAAAAAGAATTGTCCCTTACACGAATTCTTGTTACGAAGTATCGAAAGAAATGTCAACCttgcgaaaatataaaatcttagcACAACATGAAAACTTACCAGAGAGTTTGTCCAAACTAGTTTGGAAATTGTATGCTTTATATGATCTTATCGGTGGTAATAGTAGTATTGCAAGAAAATCCGATCAGCTTGCAATAACTGCGATTTTTCCGAAAGATTCAAATGTTGGTGAATTGCAACTTAACGGGGATAAAGTTGCGATTGAATACAATTCGCACTTCATTGATCTCTTCTTGACACGAATGAGAATTCATAAGTATATGGAAATACCTTTATTCAGAATGTTTTCTAGCGCATGTATTATAACGTTAGATTCTATAAAGTCGGCGTATAATACGGTTTATAGCTTCGCTAAAAATAGCGAAGTGATATTACTCGGACAATGTTATGATGAAAATCCTAGATTTGTATTAACGGCAGCCAACGGTGTGTATGGGATTAACGTCAATTTAACTGATGAATCAGGAACTACACGAATTATGGCCGACAAGGATAGAGGAATCCTATATAACGCCACATCATCCATACAATTGCAATCTGACTACGTGTTTCATAAATTAGGAACTAAGAAGATTAAAATGGGCGACAAAGCAATCGATATTTTGCTACCTaatctttttctatatatgCGTTGGACACAGCAACAAGTTCTAATCTTTTTCTCCAACCATGTGCTAGAATTTAGTTGTGGAATATGCACACTCGATCATCCCAACATCGACCGATTATACGAAAAACTC
Protein Sequence
MSLFNKPKRNIRRRPFDDEDEDNENRMEVEDAQPVKVKTKKDKPKQTRLSFGEELEQGDDGEVFIVKKSSRSKKLMKQLDHERRKKKGEEKMQVDTEQANKSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALAAGKDDYTSGEEEDEPCSHKFRKNTDKAEAVKILLESTDDKGKSRLIREEDHDRSDDDDSQDRLDMTVNTEARDKEKRREAFLASQVPLKFSDNESEHENEEEEWEAQQIRKGVTGAQIAAAQQDSMLQQQYTMGMNVNQIIGSGVPLEMVLMPAPPPPPSIQPPDPTKIVPVTSQEVVNRMRTRLDNLKEVHRRHQQDQERLEGELQQTIKELDESEVRTPHYAQRFRYYQELRGYVTDLVECLDEKLPLVIDLEQRWLDLYGERSVELMERRRQDTRDQAEEITTTARGQAIRRGPEVEIHVRRATEREGRRARRRRARELASNIPKHIDGMSSDDEVTEQQNLVFKQAKDEIDNNCKDIFSDVMEEYCTVRGILSKFESWRETDMDAYTEAYVSLCLPKIISPIIRLQLLTWNPIMESADLERTKWYNTLLLYALDSKETEESLKRDPDVRLIPSTIEKIVIPKLTSIIEKIWDPMSTSQTLRLVGTINRLIKEYPNLNDSSKQLETLFNAILDKIKAAIENDVFIPIFPKQVWDTKHQFFQRQFAMAVKLLRNLLSWQGILGDIQLKNLALGSLLNRYLLAGLRVSCPTDALFKANMIMSTLPRAWLQGETIEHLKMFATLIQQLSEQLDQANPAHNTEIVAQSLFRSGKEYIYSYNTISSTGVLVPSNAASSWNLHGKLVIHTEDDFVTIQLQSLKTNMHNGNVKKVIEDIDIYDDAVELLKPFRLSYNKGLIENFSTETEPKNVVEDINITNHYGKCDIDYIVSPEDDSRLIRKSFDPRMCIGHPSRYWSNVPKVQCTDDDQNPILKSSERMYQLKTDGFVHNIISVNASGGIYVQPFQSMGEAQYHFVRQTIELASVKDIANKIITNNLRTTVLQHELPEIDLTQGRGTPDKNFIFKSISHLLDRLSHRLENPGLDTEIHNLHNTTISVLLYYLGMLDRVDLGKAYTRISGTSYKEETIRNMFLEALPQVGSRESALFILDLVQGNEVSDMSAIQLLMRLPFHIKKPDVQLLVSLQPLLALPSKICAEVQNTAILTYGTLIYKTCLVHCPYEMLDDYVRLYLDKFTETTLYEQKMIWLEGLANIQLGKVVEFLEPIATGNNAESRHFRVLAAWASIPTAPLRPDVIYPVYWPILLNRTEHLEMRVAALTLLIVSSPTPNRLISLYWYMQNEPNQHLYNYFYTMLKSMERTTHPCYRRISKIAAQFSRVLRVPNNEYMITGNYLIDYQDSLRRFGAMLHGIIIANPSTNIPEVIYVTLNNYASGTHLNHVSLYIKAEGIFHSLATSFDNPTNIKDILKEFKLDERMKGPMHLEIITRIQEKTVLCVHWNETNIVEGLKYLSSLSDNIYQTYYNMEFHVNQQRINVPLAIESVQVTDFGTNVRLAMTGTSLFSMRGNFTRDFPGRNNHIILRTSVHGIETIENYNPLVDLWHSAERVQSLHGYLPINVTLGLDERPFISYDTLEEHLKTGITVHARTLTNIRGANVRSKLNRVCRSCSVSHTVVKSPSSDLQTVNILNVGLPELGGRLQVKIFDCESMISYETLINDIWSFHRSNYQTWPSMKFVLIGLHFLDYFTFVPPKGSCGLAAYIEALKFGPSQTKLEYIKSENRHILSLTHHDLQSSQVLHQWNLAGLYEATSWLSDAIKFKATKIVPNERVLKFCVEAERHMPWQWEILSNEPSESYRIKLNFIWGLSDTVKGKCSGSSLSINLIGEISSKQLEESKRASWPYGECKNESEGKRIVPYTNSCYEVSKEMSTLRKYKILAQHENLPESLSKLVWKLYALYDLIGGNSSIARKSDQLAITAIFPKDSNVGELQLNGDKVAIEYNSHFIDLFLTRMRIHKYMEIPLFRMFSSACIITLDSIKSAYNTVYSFAKNSEVILLGQCYDENPRFVLTAANGVYGINVNLTDESGTTRIMADKDRGILYNATSSIQLQSDYVFHKLGTKKIKMGDKAIDILLPNLFLYMRWTQQQVLIFFSNHVLEFSCGICTLDHPNIDRLYEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01269054;
90% Identity
iTF_00016677;
80% Identity
-