Basic Information

Insect: Pseudoatta argentina
Gene Symbol: ttk
Assembly: GCA_017607525.1
Location: JAANIA010002906.1:5786-8337[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.1e-05 0.025 13.4 0.0 22 38 208 225 188 231 0.74

2 4 1.5e-11 1.7e-08 33.1 0.0 4 39 241 275 239 282 0.85

3 4 0.058 68 2.4 0.0 21 35 309 323 295 329 0.79

4 4 1.8e-11 2.1e-08 32.8 0.1 4 39 353 388 350 392 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.1e-05	0.025	13.4	0.0	22	38	208	225	188	231	0.74
2	4	1.5e-11	1.7e-08	33.1	0.0	4	39	241	275	239	282	0.85
3	4	0.058	68	2.4	0.0	21	35	309	323	295	329	0.79
4	4	1.8e-11	2.1e-08	32.8	0.1	4	39	353	388	350	392	0.93

Sequence Information

Coding Sequence: ATGACTGACACTAGCCAATGTAAAGTCAATCAGAGTTACCGTTTTAAATGGAACAATTATCAAAATCATCTGTCTAACGTTGTGCGGCAGCTTTTGGAGGAAGATTGTATGGTGGATGTCACTCTATCCGCAGATGGTCAACGTATTCATGCGCATCGCATTGTTTTATGCGCGTGTAGTATTTTGTTTcaaGAAGTGCTAAGTCAAGTAACAGAAGATTATCCAACGATTATTCTAAGTGATATATCTCCTCAGGATATAAAGTCGATTatcgaatttatatatcatggAGAAATTTGTGTTCCTGTTGAAAATATCAGTAGCTTACTTGAAGCTGCACGgtcgttaaaaataaatggtcTTATTAATATAGATGGTGtttatgaaaatgaaattaaaggaaaaaaagatcaaGCAATGGAAGAAACTGTGTCAAGGGTAGAGGAAATTCAGGACAATGCTGAATCTTTGGAGAATGAAACTCATGAACCAAGCACTGctgaaaattgtatttcaaataaaaagaagaaacgacGCCGTGACACTGTAAAGAGAGAATACAGTGACGATATGTTAGCATCTGCAATTAATGATTTGAAATTAGGACAAACTTTAATAGAAACTGCTACCAAGCATAATATACCACGTTCGACATTGTATATGCGGGCAAAAGCATTAGGCATACATTTAAATGCATCAAGGAATGGATATCCTGCAGAATGCATGAATGCAGCTATAAATTCTGTAATCAATGGTTCGAGCTTGCAGCGTGCatcagaaatatttagaataccTAAAACTGTATTATGGAGACGTATACAAAAGGAAGGCTATCAGATCTTACGTCGTCAAATGAAAAGATCATATGCTTTAGACACGAAAGAGGCCGCTGTTAAAGCTTTAGAAAGAGGAGAAAATTTGACAAAAGTTGCTCTGGagtttaaaATACCAAAGACTACATTGTTTAGAGAAAAGGCACGGCTAGTAAATCAAGGTAAATTACCGTTATCGTTTTGGAAGAAACGCAAACCTGAGAATGAGGAATCAAAGAAGTCGCGATTAGAAGAGGCTGTAGCGGCTTGCAAAGGTGGCAGAATGTCGCAGGCTGCAGCGTCCATAATGTATCACATTCCAAAAACTACGATATGGCGAAGACTTCAACAAGATGGAAAAAAAGCGGAAAAATCATCGAATGTGAAAAAGGAACGACTAACTGATACATCAGTACTGCATGACTCTCAGGTGAAAATACAAGACACGTCCAATTTCAATTATTGCGAGGTTGCATCAGAAATACCTATAACTTATATAGACGAGGATAGTATACCTCAGGATTCCGTCATAATTCTAACAACAGAAGAAATGGATGAGTTAAACTTGGAAGGAGGCAgacaaattattgtaaattcggAGTCCGGACAGGAATATATTCCATGTACAATAAGTATCGAGAATAATTCTAACTATTCTGAGACTGAGAGT
Protein Sequence: MTDTSQCKVNQSYRFKWNNYQNHLSNVVRQLLEEDCMVDVTLSADGQRIHAHRIVLCACSILFQEVLSQVTEDYPTIILSDISPQDIKSIIEFIYHGEICVPVENISSLLEAARSLKINGLINIDGVYENEIKGKKDQAMEETVSRVEEIQDNAESLENETHEPSTAENCISNKKKKRRRDTVKREYSDDMLASAINDLKLGQTLIETATKHNIPRSTLYMRAKALGIHLNASRNGYPAECMNAAINSVINGSSLQRASEIFRIPKTVLWRRIQKEGYQILRRQMKRSYALDTKEAAVKALERGENLTKVALEFKIPKTTLFREKARLVNQGKLPLSFWKKRKPENEESKKSRLEEAVAACKGGRMSQAAASIMYHIPKTTIWRRLQQDGKKAEKSSNVKKERLTDTSVLHDSQVKIQDTSNFNYCEVASEIPITYIDEDSIPQDSVIILTTEEMDELNLEGGRQIIVNSESGQEYIPCTISIENNSNYSETES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423555;
90% Identity: iTF_01477029;
80% Identity: iTF_01261927;