Pter005823.1
Basic Information
- Insect
- Protophormia terraenovae
- Gene Symbol
- -
- Assembly
- GCA_951394005.1
- Location
- OX596073.1:131292980-131303848[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.13 12 7.7 0.7 1 23 1751 1774 1751 1774 0.91 2 11 2.4 2.3e+02 3.6 1.0 1 23 1932 1954 1932 1954 0.93 3 11 0.00091 0.087 14.4 2.8 2 23 1957 1978 1957 1978 0.97 4 11 4.4e-05 0.0042 18.5 0.2 3 23 1986 2006 1984 2006 0.98 5 11 9e-06 0.00085 20.7 5.8 2 23 2013 2034 2012 2034 0.97 6 11 0.044 4.2 9.1 0.1 2 23 2104 2124 2103 2124 0.96 7 11 0.00011 0.01 17.3 0.4 1 19 2130 2148 2130 2152 0.95 8 11 6.1e-06 0.00058 21.2 1.8 1 23 2160 2182 2160 2182 0.99 9 11 0.00021 0.02 16.4 6.5 1 23 2188 2210 2188 2211 0.96 10 11 0.0013 0.12 13.9 6.4 1 23 2216 2238 2216 2238 0.99 11 11 0.0033 0.31 12.7 6.0 1 23 2244 2266 2244 2267 0.96
Sequence Information
- Coding Sequence
- ATGACTGAAAACGTTCAGTGTCCAGTATGTACTTTATACCTGCATGCAGGTATGAACCTTTCGGATCACTTGGAAACACATCCGAAAGAACAAGTGATTCGAGCTTTAGTACAAATGACCATATCTGGCAATGGAATCGGAGGTAACAATACTTTGGCCTCTGTTTTAGCTGGAGAAAATAGCAGTATAGGCAATGGGACCAAAAAATCAACTAACAACGATTTGGATGAGAAACCTTTGCCAAGCCACAAAGATAATGAGCTTAATATTAGCAGTTCTGGTAATAGTTGTAGTGCTAGTTCAAGTAATTCTGCTAGCAATTGTTCAGTGTCAAACCAAAGTGTTAGTAGTAGTCAAAATTCAaataacatattaaatttttccgcTACCAAAATCGAAAGACAAAATGAAACTGAAAAGGATAAAACTCCAACCACCCCATCAACAATGTCGGCCAAAATAATGGTTAAAACAGAAATGAACACGACGACAAAAGACAATGCCGCTGCTAATGAAAATGCGAACACATGcttttctaaacaaaatttcaatcaaaCCAATTCTTCTTCAAACTCTTCGAACTCTACAACAAGTGCAAGCCAATCATATCAGCCAAACTCGATTGAATTGACAAATGCAAATATTCATAATAGTTTTAACGTATTTGGCGGTAATTCTAGATATGAGCAACAACAGCGTAATGGCGTAAATAATCAAAATCAACTGTCTACACCACCACATATGCCACCACCGCCAGCACCAGTAACAGCAACAGCGCAAAGTCAACACCCTGGACAACATCAAGATGTAGGACGAGGAATAATACCAGCGGTATCAAGTGCGACATTTCATTCGTTGCAGCCACAACAATTgccaccaccaccaccacccCCACCGCATCACACATCGTCCCATTTGGGCAATGCATCAAGTAGCCATCGACAGACTCACATGTTTGCAACAGGACAGCATCATCAACAAACGCCACCGTCAAATTCTCATCATCAACAAAGTTTAAAGGTTATATATACACCGAATTTGCCACCTCCGCCTCCGCTGCAGCTTTTCACTTATCAACCACAAACACATTTGCAACATCATCAGAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAATCAAAATAAGAATCAAGTGGCAGGGTCATTGGCAACGCAACACCAAAATCAGTCATTGCAAGCACATTCAATTttacaacaacagcagcaacaacaacaacatcatttGCAGCAACAGCAAACGTTGCAACACAATTTAAGAATTCATGTACCACCGCCACCACCGCTACCAATTCCAACAAAACATTCATATAACTCAAAAAACAATAGTTTGTCAATTCAACATCATTCAACGatgacaacaacaacaacatcagcaTCATCTAGACATAGCCAAACCCAACAACATCCCCAACATCAGCAAATACCCAAAACAGATTTGTCCCACCATCATCAGCTACAGCAGAAACAGCAGCAACATCAACAGAACCATCAGCGAGAAAATCAACAACATCATACTAACTCTGATAATGCAACACAAAATTCCAATAATCCGATTTTTAATTCAAACGAAAATCCAAATAAATCCACAAAAGTATCATCGATATCAAGTAtgcaaaattcaaataataatattcCATCATATCCTCAAGTTTCTATTAGTCCATCTTCTGCTTCGGCATCAATAGCTGCAGTAGCAGCTTCAACATTGGGAAGACACACAAATTCACCATTTGCTGCTTTATTAGCAGCAGCAGCCGGTGCTCCATCTCCTTCTAATGCATCGTCTGTTTTGCGATACGCAGAGTCGCCTGTAGCTCATTATTTAGAGCGTGAAAATGGCGATTTCATTGTACAAGAAACTCCCAAACATATTGTTGAATGTGTTGAAACAGACAATGGAGAGTTTTCCGTCATTGAACGTATATACCAATCACCACCCAGTGTTTTACACATACATGACGATGAAGATGATGAAGAAGACGGCGATGAAGGTAATACCGACAATCGTGGAGGCCAGGCTGAGAAAGAAAAACGTGAAAATAAGTCTAAACAATCTGAAAATGACGGTGATAAAATAAAAGATGAAACGGGAGAAAAGCAAAGACAAAAGAAAACTTTCTCAAAGGATGATAATAAAATATCTGTTGAAAAGGATAAGTATGATAATAATAAGAAATCTAAGGCTAATGACGAAACATCTGATGATAATGATATTGTGGATTTTGTTAGCATTTCGAGTGACAGCGGCGACGAAGAGGAATTCATATCACAAGAACAAAAGGATCATCAAAATAACACCTCCATATTAGCAACACCAACCACATCAACAATATCCACAACGACATCAACAACTGTAACGTCATCCATAACAACAAGTGGTGGTGTTGACAATCAACCATCACCTTCTACATTATCATCCTCTTTGCAATCTACTTCTTCATCTTCCGTCACGACAAATACTACCCAAACACAACAAAACTCGGGAGCCACAACTAATAATAACGGTAGTCGTAAGAAATCATCGAAAAACACAATCACCGTATTAAGTGAcgttcaattaaatttaaatgaatatttagaTTTGGTGGGTAACATAATTGCTTCGAGCAAAGTAGCGGCGGCTCAACGTAAAACATTTGCAACCATAGCTCCTATACCTTTGGTGAAAATTGAAAAGGAGGAACCTATGGATGAATACATAACAACAAACCCAACAACATCAACAATtccaataacaaaaacaaattttgaaactcCACCACCAACAACAACACCTATAAAGGCCAACAAACATGAGACTGAAGAAATAACTGATACCCCTAACAGTAGTAATAATAGTAGacaaacaataaataataataataatcataatgtAATTTTAACAAATGACCTAGAACATGACGAACAAGAAGAGAAAAAACCTCAGGTCTTTGGAAATGTATTGGAAACTGAAACCTCATCTACTAATGCTATTTCGAACACTTCTTTTAATCTAATGACTACAAATTCCAGTCATGTTACCAGTGTTATACGTATGGCCACAACTAGTCAACACCAAGCCCaacaaaaccaacaacaactacaacagcAGAATTCTttggaaaacaataaaaattctaCTGAAGCTGAGGATCTCTCACAACCCCAACGTAAAGTTCAATCAATGGCAAATGTGAAATCTTTAGGCCATCAGGCACCATTGGCTCGTAAAGGTcctaaaaaattagttattaagCCAAAAACTTCAAAGACTGAAGTTTTGCCCAGCACAAACACTGAAAATAATCCAAACCAAAATCAATTAGATAACGTTCAAGAAATGTCCACAACTTCGACTAAGGCTAGACaagaatatataaaacaaacatCTGCCGAGGAAGATGCGTTAAATGCCACcgatataaaagttaaaaatgaaCCCATTACTTCTATAACATATGAAaatcaacaacagcaacaacaaaatccTCCCTATCAACCAACCACAACTTTCAGTATCTTGGAACAACATCTCAATTCTAAAGAACCTATATTAGAGTTTAAAGAGGAAAAACCTTGCATACAAGAAGCTAGTGTACCGCCAATATCAATCATAAAAGAAATGAAAGTAGAAAATAATGTTAACGATGATGCTCGTGTACTTTATGATTTTGCGAATTCGAAAAAGTCACAAAACGAAACACCATCAACTACTTTTCCTTCTTCCACATCGTTATTCTCCagcaaacaaactttattaGAAACATCATCAGCTGAAGAGGTACAGCAACAGCAGCAACTAACTAAGAACTTGAATCATGAACATGATACAACGTCTTCGGCTTCATCAACATATTCATCGCAATCAGCTATGGATGCTACCATACCATCTGAAGATCATAATGAAAATTCAGCTACAGCAAATGCACCAACACAACATCAATCCAATCAGATGTACACCGATTTTCACTTCAACTATTTGTACAATAATGGTGGAAGTAACGTGACTGCAGTTGCTTCTGAACAAGTCGACATAAAAAATCCCCAAGAATTTACAACATTTTATCAGAATTCTggaaataataacaataacatgTCAATGGAAGACTCATCATCCAGCAAACACTATACAGATTATCAACAACATAAtaatcaacatcatcatcatcagcagcaGTTACAACAGCAACATCATCAATCTGCTGGAACATCGCAGCACCAATGGTTTAATAACAGTAATAATTATCAAACTTCTGAACCCAATATTACACCAATAACTTCAAATCATTCAGTTTCTAACATGAACAGTTCTTTGTCCGTTGATGGCAATAGCGCTGCTTTGGATGGTACTGAAGTTAGTAAATATTTAGATTTGGATTCATGTAAACGTGAACAAAACATTGACTTAATTGTTGGTGATCGTGTTACTGTACCACCACCACCGCCACCATCTTCCTCAACATCGTGTTCGTTTAATGGTGCAACAGACAATAGTATGGCTGGTATCTGTTCAACGGCAGTCACTCTCAATATACGAACAGATGAGAAAATGCCAGCGAAAGGGGAAATCTCCGAACAGGAAAGTAATTGCGATATAGATAACTCATGGAGTCAACCGATGTATGGCGACATTTCTGCTCGTTTCTTTAAGACAACATTTCCCGGTATGTTTCCACAAGACAATGGCTGGAATAATGAGGAATATTTTACTGTACAGGATTTGAGTGCCTCAACAACTGCACAAGCTACTAACAGTGAAAGCAGTAGACTGAAAAgTTTCGAGCCTTTAAACAGCAGTAgtagcaacaataacaacagcaaTGGAATGGcaatattttctcaaaattccaATGATAACTGCAACATTGATGTAATGCCATCAACATCAGCTAAAATACGTAAAAGACGTAAACGCAGTTCTCAAGATGGCAAAGTGTCGCAAACGAATGGTAAGCGCATGCAGCCAACATCGACAGTTACGTCACAACAAATGATGATGCAACATCAAAATGAGATAACAGGGGTTGAATTTAATTTCCAACACCAACAGTTGCAACATGAAGCTCATTTACAGACACATCAACAATTGCAAGAACCTAGTACATCGTCAGTATTTTTGGCTGGACCATCAAATGCTGGTACTGGCTTTATAATGCAACAACAGCACCCGCAACAGCAACAAACACAGCCTCAACAACACCAAACACAACAGAGACAACGCACAAAAGTTTATGAATGTGGTCATTGTAATGCCAAGTATTCTAAACTTAAAGATCGTAATGCTCATATGGTTGATGTTCACAACTATATACGTCAAAATAGAAGACTAGTATGTCCCACAACTGGTCTTGCCACACCCTTAACGAATTCAGATATGCAAGATGTTGCATTGCCCACAACAAGTGCAGCTGGTAGCATGTTAATGCCCCCAATACAAAATGCCGACTGTATGGGTGATTACAAACAAGCCAttgtaaaaatagaaaatgaaaatatccAACGTGACCTATCGGGTGCAGAGCCAATCAATGCTAATTTAAGtgctaaaacagaatttataGAAGACGATAAACATAATTTAGCCCTAGTACCAAGCGAAATCAATCTTGAGTGTGATACCAAACCACCAAACAATAATTTGCCATTGTCGCTGACAACACCCACTAGTAAATTAACAACACTCTATCGTATGTTAGTATCCTTTAATATGACAACATTGAAACAAAACCAAAGTCTTTCTGAATTCGATGAGAATCTTATAAAATCATCGATATTCTTCTGTTATATATGTCGACAAAATTTCAATTCGGTGAAATTGTATGATGCTCATTTGACCGAACATCCCGCAGAATGTTTTACGTGTGGCAAAAAATTTCAACGTTGGAAGAATTTTTCGTTGCATTTAAAACGTCATTTGGGTTGGAAAGAATTCGGTTGTACGGTATGCGATAAGAAATTTGTTGTACGAAGTGCTCTCGTTGAGCATATGCGTATGCATTCCGGTCTATCGCCATTGAAATGTAAAGTTTGTGGCAAACACTTTAAGCGCTACTCAAACTTAACTCAACATCGTAAGCGACACACGAAACAAATTGTTCGTAGGAAAGAATACGTTTGTTATTGTGGCGAGGTTCTACCATCCAAAGCACGCTTCTTGTGGCATAAGGAAACTCATGACTCCAAACCAAAATGTTGTCCTCATTGTTGTGATCGTTTTGTGCACGTGAACTCTCTGCGTCGTCACATACGTCTCGCCCATTCAGATAAATTCGATTACACCGAACCGATGGAATGTCCAATTTGCAAGCAGATCTTTGCTAAAGCCTCTATGAAAGCTCATATGGCAACGCATTCCACAGAAACTCAATATGATTGTGCTATTTGCAATAAGTCCTTCTCAACAAAATGGAATTTAAAGATACATTCTTGGGTACATGCAAATCGCACCGCGAAACCATTTAAATGTGAACACTGCCCCAAGGCATTCGTGCGTGAGGTCGATTTTAAGAATCACATGAATTCCCACAAACAAATTAAACCATACACCTGTGAAGTGTGTGGTTGCAAGTTTATACGCAAATACAATTATATGCGCCATAGACGAGAGCATCATGGCAACAAAAAGTATACCTGTGATCTATGTAAAAAGTCGTTCCATCGCCACTACTATCTAATCGAGCATAGACGCATACATACCGGTGAACGACCTTTCCAATGTACGATTTGTGGTAAAAGTTCAACAACTAAAACTAATCATAACAAACACCTTAAGATTCATCATTCAAGAGATCCTTTTACAGTGGAAGTATAA
- Protein Sequence
- MTENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGNGIGGNNTLASVLAGENSSIGNGTKKSTNNDLDEKPLPSHKDNELNISSSGNSCSASSSNSASNCSVSNQSVSSSQNSNNILNFSATKIERQNETEKDKTPTTPSTMSAKIMVKTEMNTTTKDNAAANENANTCFSKQNFNQTNSSSNSSNSTTSASQSYQPNSIELTNANIHNSFNVFGGNSRYEQQQRNGVNNQNQLSTPPHMPPPPAPVTATAQSQHPGQHQDVGRGIIPAVSSATFHSLQPQQLPPPPPPPPHHTSSHLGNASSSHRQTHMFATGQHHQQTPPSNSHHQQSLKVIYTPNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQNKNQVAGSLATQHQNQSLQAHSILQQQQQQQQHHLQQQQTLQHNLRIHVPPPPPLPIPTKHSYNSKNNSLSIQHHSTMTTTTTSASSRHSQTQQHPQHQQIPKTDLSHHHQLQQKQQQHQQNHQRENQQHHTNSDNATQNSNNPIFNSNENPNKSTKVSSISSMQNSNNNIPSYPQVSISPSSASASIAAVAASTLGRHTNSPFAALLAAAAGAPSPSNASSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDEDDEEDGDEGNTDNRGGQAEKEKRENKSKQSENDGDKIKDETGEKQRQKKTFSKDDNKISVEKDKYDNNKKSKANDETSDDNDIVDFVSISSDSGDEEEFISQEQKDHQNNTSILATPTTSTISTTTSTTVTSSITTSGGVDNQPSPSTLSSSLQSTSSSSVTTNTTQTQQNSGATTNNNGSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAAQRKTFATIAPIPLVKIEKEEPMDEYITTNPTTSTIPITKTNFETPPPTTTPIKANKHETEEITDTPNSSNNSRQTINNNNNHNVILTNDLEHDEQEEKKPQVFGNVLETETSSTNAISNTSFNLMTTNSSHVTSVIRMATTSQHQAQQNQQQLQQQNSLENNKNSTEAEDLSQPQRKVQSMANVKSLGHQAPLARKGPKKLVIKPKTSKTEVLPSTNTENNPNQNQLDNVQEMSTTSTKARQEYIKQTSAEEDALNATDIKVKNEPITSITYENQQQQQQNPPYQPTTTFSILEQHLNSKEPILEFKEEKPCIQEASVPPISIIKEMKVENNVNDDARVLYDFANSKKSQNETPSTTFPSSTSLFSSKQTLLETSSAEEVQQQQQLTKNLNHEHDTTSSASSTYSSQSAMDATIPSEDHNENSATANAPTQHQSNQMYTDFHFNYLYNNGGSNVTAVASEQVDIKNPQEFTTFYQNSGNNNNNMSMEDSSSSKHYTDYQQHNNQHHHHQQQLQQQHHQSAGTSQHQWFNNSNNYQTSEPNITPITSNHSVSNMNSSLSVDGNSAALDGTEVSKYLDLDSCKREQNIDLIVGDRVTVPPPPPPSSSTSCSFNGATDNSMAGICSTAVTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGMFPQDNGWNNEEYFTVQDLSASTTAQATNSESSRLKSFEPLNSSSSNNNNSNGMAIFSQNSNDNCNIDVMPSTSAKIRKRRKRSSQDGKVSQTNGKRMQPTSTVTSQQMMMQHQNEITGVEFNFQHQQLQHEAHLQTHQQLQEPSTSSVFLAGPSNAGTGFIMQQQHPQQQQTQPQQHQTQQRQRTKVYECGHCNAKYSKLKDRNAHMVDVHNYIRQNRRLVCPTTGLATPLTNSDMQDVALPTTSAAGSMLMPPIQNADCMGDYKQAIVKIENENIQRDLSGAEPINANLSAKTEFIEDDKHNLALVPSEINLECDTKPPNNNLPLSLTTPTSKLTTLYRMLVSFNMTTLKQNQSLSEFDENLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKQIVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01194734;
- 90% Identity
- -
- 80% Identity
- -