Pter032978.1
Basic Information
- Insect
- Protophormia terraenovae
- Gene Symbol
- bab1_2
- Assembly
- GCA_951394005.1
- Location
- OX596077.1:96863148-96865559[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-12 2.5e-08 34.6 0.0 4 45 418 459 415 459 0.91 2 2 3.1 1.1e+04 -2.7 0.9 4 20 556 571 556 571 0.86
Sequence Information
- Coding Sequence
- ATGGGCGGTCCACCAGCCCCTAGTTCTTCAAATGGTCCCCCAGAGGGTCAAACCTATTGCCTGCGTTGGAAtaatcataaatcaaatttagtTGAAATCTTAGATGCTCTCATCAAGGTCGAAAGTTATGTAGACTGTACCATAGTGGTAGATGATCAAGTACAATTTAAAGCTCATCGTGTTGTCTTGGCTGCTAATTCACCCTATTTCCAATCCATTTTACAAGATTTGCCCATGGATCATTGTAGTATTATATTTCCGGGTGTTAAGGCTTTTGAAATGCGTGCTTTATTGGAATATATGTATACGGGTGAGGTAAATGTTACCCAAAGTCAAATACCCAAAATAATGCGCATTGCCGAGGAATTAGAGGTAAAAGGTCTATTCGATATGGCTGACTTAAAGGAGAAGTTCAACAAATTAAGTGAGGAACATGCTGAAAGAGCGGCTAGTAATCCTTATGCCAGTACATCGGCTCCCTCAAATCCTTATTCCTCTGTTACTACCACCTCTTCGCCTTCAGCAAATTTAACACATCCGAAATCCAGCTCTAAGGATGCGGATAATTATCGTAATAATTCCTCCTCCGTGATCTCTACCTCCTCGAATATTTCACCTTCAGCTGCTCCCTCCAGTAGTTCATCGCCACCCTATAGCAATTACAAATCGCCATACTCCAGTTTATATACCAAGTCTCCCGGTCCCAATGCAAATCAATCATCTTCAGCCCAACCTCAATCCAGTCAACAAACTCCTAGTAATCTTACACCCTCCAGTGAACGTTCTGCTCAATGGCCTTTGTCACCCTCTGCTGCCGCTGCTGCTGCCATGTTAAGTTCTGTCTATGAATCTGCTCCCGATATGAATCCCTTAAAACGCAAAAAGCTCTCCTCTATGTCTAGTATGTTAATGAATCGTGATACACCCATTTTGCGTAATGTTTTGGCTCAAGCTAATCCCGCCGATTCGTCACAACAATTACCTCTAATGTTGCCTAATGCAGTAGGTAGTAACAAGGCTGATAAGTCCTCTAGTTCGGAAAAGAATTTAAGTGGTCATAATAACAATCACAGCTTTAATGGTTCGGATTATAGTGATAAgAAATACCATGATGAACCACATTCCCCCTTCACCGATCGTTCCTTTGAGGATGATGGCTTCGATCCCAAGGGCAGCAATTTTGGTGGCAATTTCGGCAACAATGCCAATCAAAAACCCGAATGGAAACGTTATAAACAATATACCCGCAGTGATATCATGTCTGCTATTCAATGTGTACGTGAAGGTATGAGTGCTTTACAAGCATCACGTAAATTTGGTGTGCCCTCACGTACTCTGTACGACAAAGTCAAGAAGTTGGGTATTACCACTGGCCGTCCTATGAATCGTACCATGAAACGTAGCCCCAGCAGTGTAGAATCATCGGCTGCCTTCCCTTATGCCCATGGCTACGGTCAAGCTTCAGCTGCTGCCGCTGCCATGCATGATGCTGCTGCTCGTGAAGAACGTGAAATGAAGGAACATCACCGCAATAATGATCATCATCACTTACCACCAACCATTCCCCATCCAGCCGCTGCCCTATTAGATCACGCTTTCTTACAACAGGCCTTGGAAAATCGTGGTGGTGGCGATATAGCAGGACGTGAAGCGCTTCATGCCATGGCTTTAGCTGCTGCTGCTCATGCTGCCGCCAATCGTATGTCCACCAGTCCTGGGCCCAATGGTAATGCAGTACGTTCCCCCAGTCCATcgaattttgctttaaaatataaCAACTTACGCAATGCCGAACAAGAGCTAATGGAACGCCAGGAATTGGAACGGGAACGTGAAAGAGAACGTGAATTTATCGAACGGGAGAGAGAGCGTGAAAGAGAACGTGAACACGATTTAGAACGCGAACGTGATGATGAAGAAGATGATCATGTTGAAGATTTATCAGTAGCCCGCAAAGACAATAACAATTCGCCTTTAGAGGCTAGAGAAAGACCTGAATCTCCCTACTCACCGGGAGTAGCAGGCAATAGCGATAATGAAAAATCTGTTATAATGACCACTAAATTACCCTCAAATCCCAATGATGATGCCTTCATCAATGAAACCAACCTCAAACGTGAGGTAGTAATAGATGATGTCAGAGCCGACTGA
- Protein Sequence
- MGGPPAPSSSNGPPEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLSEEHAERAASNPYASTSAPSNPYSSVTTTSSPSANLTHPKSSSKDADNYRNNSSSVISTSSNISPSAAPSSSSSPPYSNYKSPYSSLYTKSPGPNANQSSSAQPQSSQQTPSNLTPSSERSAQWPLSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQANPADSSQQLPLMLPNAVGSNKADKSSSSEKNLSGHNNNHSFNGSDYSDKKYHDEPHSPFTDRSFEDDGFDPKGSNFGGNFGNNANQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSVESSAAFPYAHGYGQASAAAAAMHDAAAREEREMKEHHRNNDHHHLPPTIPHPAAALLDHAFLQQALENRGGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPSNFALKYNNLRNAEQELMERQELEREREREREFIEREREREREREHDLERERDDEEDDHVEDLSVARKDNNNSPLEARERPESPYSPGVAGNSDNEKSVIMTTKLPSNPNDDAFINETNLKREVVIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01194320;
- 80% Identity
- iTF_01261109;