Basic Information

Insect: Protodeltote pygarga
Gene Symbol: -
Assembly: GCA_936440985.2
Location: CAKZFI020000038.1:396657-425649[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.4 1.4e+02 3.4 0.7 2 19 494 511 493 515 0.87

2 18 0.018 1 10.1 0.0 1 23 525 548 525 548 0.95

3 18 0.068 4 8.3 2.8 1 21 667 687 667 688 0.94

4 18 0.042 2.4 8.9 3.8 2 23 751 772 750 772 0.95

5 18 3.6 2.1e+02 2.9 2.0 1 23 784 808 784 808 0.90

6 18 0.00017 0.01 16.5 0.5 2 23 815 838 814 838 0.97

7 18 0.082 4.8 8.0 0.2 1 23 844 866 844 866 0.93

8 18 0.004 0.23 12.2 2.9 1 23 872 894 872 894 0.98

9 18 2.5 1.5e+02 3.3 0.2 2 19 905 922 905 925 0.90

10 18 0.086 5 8.0 0.2 1 23 1004 1026 1004 1026 0.96

11 18 2.4 1.4e+02 3.4 7.2 1 23 1033 1055 1033 1055 0.95

12 18 0.0016 0.095 13.4 1.8 1 23 1094 1117 1094 1117 0.95

13 18 7.8e-05 0.0045 17.5 0.8 1 23 1124 1147 1124 1147 0.98

14 18 0.013 0.75 10.6 0.2 2 23 1169 1191 1168 1191 0.96

15 18 0.004 0.23 12.2 2.3 3 23 1217 1238 1216 1238 0.95

16 18 0.00036 0.021 15.5 1.2 1 23 1272 1294 1272 1294 0.96

17 18 0.00014 0.0083 16.7 0.1 1 23 1300 1322 1300 1322 0.97

18 18 0.00066 0.039 14.6 0.6 3 23 1330 1351 1328 1351 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.4	1.4e+02	3.4	0.7	2	19	494	511	493	515	0.87
2	18	0.018	1	10.1	0.0	1	23	525	548	525	548	0.95
3	18	0.068	4	8.3	2.8	1	21	667	687	667	688	0.94
4	18	0.042	2.4	8.9	3.8	2	23	751	772	750	772	0.95
5	18	3.6	2.1e+02	2.9	2.0	1	23	784	808	784	808	0.90
6	18	0.00017	0.01	16.5	0.5	2	23	815	838	814	838	0.97
7	18	0.082	4.8	8.0	0.2	1	23	844	866	844	866	0.93
8	18	0.004	0.23	12.2	2.9	1	23	872	894	872	894	0.98
9	18	2.5	1.5e+02	3.3	0.2	2	19	905	922	905	925	0.90
10	18	0.086	5	8.0	0.2	1	23	1004	1026	1004	1026	0.96
11	18	2.4	1.4e+02	3.4	7.2	1	23	1033	1055	1033	1055	0.95
12	18	0.0016	0.095	13.4	1.8	1	23	1094	1117	1094	1117	0.95
13	18	7.8e-05	0.0045	17.5	0.8	1	23	1124	1147	1124	1147	0.98
14	18	0.013	0.75	10.6	0.2	2	23	1169	1191	1168	1191	0.96
15	18	0.004	0.23	12.2	2.3	3	23	1217	1238	1216	1238	0.95
16	18	0.00036	0.021	15.5	1.2	1	23	1272	1294	1272	1294	0.96
17	18	0.00014	0.0083	16.7	0.1	1	23	1300	1322	1300	1322	0.97
18	18	0.00066	0.039	14.6	0.6	3	23	1330	1351	1328	1351	0.95

Sequence Information

Coding Sequence: ATGTCAGAGACGCAACCGCCATTGATCCTGTGTATGGAGAACGCTACGGGTGAAGATGTGGCGCTCAGAGTAGAACCCGATGATAATTTTCAGATGTTCCTTGATAAAGCCAAATCATTACTAGGCTTCGACGTAGACCTAAACTCTATTACCAGAAACCAACCAGTTTCACTCTCCGAAAATGTCTACCAGTTCCTCATAAACGCTGAACAAAATCTACAGGCAGATGACCTAACGCAAAACTTTGATCAAATGTTGGACAACAACGATGGCCCCAACGATTTGGTGTACATTTTGGATGATGGCACTCAAATCAGAGCTTCACAAATCCATTTTGATAATGACGATCCCTTAATAGATTTGACTGCAGAAAAAATACCTTTTGTTAAATACGCAGACGATATTACAGATGATATTGATATAGACAGCATGAATATACAAGAAACTAAGAAAATTAATATAGTTGAAAGTCCAGTTTCTAGATGGTCTAGTAAAAATTCTAGTCCGAAATGCAGTTTCGTTAATTCTCTACCTTTCAAACTAGTATGTAACAATACTTCTGGTTTCGAAGCTCAGTTTACCAAATATTTAGAAGCTAATACAACCAAAACTTACGCGACTTTGAACCCTGTTACTATAAGAAATAAATCTCCAAAAAGTTTGATAAAAGATAATTTTAAGAACTACGATGACAGTTATCAGAGGAATGATAACTTGTCTTATACTAGAGAAGAGATTCTGAACATGTTTAAGGATTCCCCTATGACGTCACTTCCTTACGATCAGGGTTACAGCGAAAGAAGGCATGTTAGAAAGACCGACCCTTCAAGATTAGTCCATAAAACATGGAATAAACCTATATCTTACGTAGATATAGACGGCGTTTTAATTGGCGAGAGTGAAAGCCAAATTTGCTTTATTTGCGGCAAGCACGTGGATAACAGCGTTGATAAGCTCTACCTTTTTGATAACGAAGACCAGAGACTACACAGATGTTCTCCACAGAAAAAAATGTCGACTCAATTGAAAATCATCTGCGAATTTTGCCTAAACGAAAACTTTAAACCTTGCCGAATGAAAAGTGCAAACCAGTTTCTAAATCCTGACGAATTTCTCGTCATAAGAAATAATCAACAATATATATTTCAGAAGGTTAAAAACTTTAGTTTCACACATTTGGGTAAAGCTAAAGAAATCATAAATAAGATAGAATCTAAAGTGACAGATAAGGAAGAATTTGTTAAAGTAGAAATTGGTTCTGATGGAGAGATTATTACTAAACCCATAGATAATGATCCGAGGTCTGAAGACGTCATAATAGTGAAAGATGAAAAAAAGGACGGTAGTTCGAGTGATGTGGAGATTATAGAGCCAGAACGAGAAATAGACAATATCATAGACAATTTAGAGGAAGCCGATGAAGAGGTGAAAGAGTTTTTGGGGAAATATCAATGTGATAATTATGAAGTTACTGAATTAAAATGCAGGTTCTGTGAGCGCATATTCGCGGACCTGGCAGAGGTGACAGAGCATTGTGAGTCGCACAAACACGACTTAGAAGACGGCGAGGTGTTCCCTTGTCCCCTCTGTAACTATGGTTATGCAAACATGAAATGGCTAAAAGGTCATCTAAAAGCAGCTCATGAAAAAACTGAAATAGTACACAAAGATGATGAAAAGTCTAAAGAAGAAAATAAAGAGGAAGGAGTGACATCGCCCAAAGCGTCATCGCCAATAGCAACTCGTACGAGAAGCTGCAGTAAAAAGGATGGCGATAAAAAAGATAATGATAAGCCGTCAGAAGAAAATAAGACAGATTCCAACACTGAATCGGCCGAGCCTCCTATTATAAAGACCGAGGTTAAGCAAGAATGTATAGACAGCAGCGAGGATGAGATCTGGATCGTGCAGACAGCTGATGCTGAGGGCACTCAGCAGCTGCAGAAATTGCTGAGTGGTGGCAAGGTGGATGGGCAAGAGGGCGCGTCTCAAAAGACGCACAAATGTTTCAACTGCAGTCAAATTTTCGCGACAGCTGACAGTTTATCGAGCCATCGTTGTCGAAGACGCGGCCGGAAGCGCAACTCTAAGGATCTGGTCAATTTAATATGTATACCGTCTGAGGAAGATTTTTTGAAGAGAGCACAAGGTCGTCCTAGACCAGTATGCTCGACCACAGACAACGACCTATTAGTTATGCGTCCGCGAAAACGTCGCAGCAGGGAACCGACCTCGAACCCTCAGGTGGTGACCTGCCACAACTGCAATGAGTCATTCACCTCCAAAGTTCGACTTAAGTTTCACATGCAGTTCCACGACACAAGGAACCTGATAACCCCAGAAGGTAGGTACTGTTGTTCGGAGTGCGACGGCGCCACCTTCGCGACGGAGACGGAACTCTTCGACCACGTGCACTTCCAACATGACAAGCAGAAGAGGTGGCAGTGTCCCGTCACAGGGTGTGGGAAGACGTTCTTCCTTAGGGCAACACTGACCAAACACAGTCGCACACACACAGACACGCGGCGGTACGTGTGTGTGACTTGTGGCAAAAGATTCCTAGACAAACAGACATTAGATGAGCATGGAGTCACGCATTTACAGATCAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGCGCGTCTGCGCCGTCTGCGCGCGCGCCTTCCGCGACCATGCGCATGCGCAGGAACACGCAACGAAATCAACAGAATGCATAGAGGCCTTCGCGAACGAGTTGAAGGAAGAGGCAGAGGAGGTGACGGTACAGCTGTCGCCCACCAGTGGACTTGTTAGACATACTGTGCAAATTGTTGAATCCCCAAAACTATCGAAACCCATAAAGCGCCAAGTATCGAATGTAGTGGGGGAGCCGCTACTGTCTCAGCTGGCGGACGAAGCCAGGGCTTTGATACGAGTGGTGGAGATTGAGAAGGCGTTCCGCTGCGAATACTGCGAAGATGTTTTCTACTTGGAGAGCGGTTTGAACACTCACCGCGTCATACACAAGGGCGTTAAGAACCCCTTTACGTGCCACATTTGTAAAGTTAGCTTTGCTACTTACTCTAGGTGTACGACGCACAAGACGACGCACGGGTTCTACAAGCGCTCGCTGGCCGACGCCAAGAAGCAGGCCGACGCTCCGCCCGCCGCCGGGCCCTCCGCCACCGGCATCCTGGGCTACGGAGACTTCCCCGTCGTCAAGCACTTCCTGTGCGAGGATTGCGGTCGGTCGTACCTGCACTGGACGTATCTACAAGTCCACAGGCGCATGAAACACGCGAACGAAAACTTTTTGTATAAATGCAACCAGTGCGATCTAACGTTTCCTAATAGTTGGAGCTTGGCGTATCATCGTAAGAAGGTTCACGGGAAAAGTGGACCCGACGACCCTGGCACTACCAGCAAAATAAGCAGAGATGATTACAGGATACCGTGTCGAGATTGCGACGAGATACTTCCAAATAAGACAGCTCTTTACAAGCATAGGAAAAAGGAACACAGCGATGGAAATATTCGCACCAATAATAAGCAGGGTTATGGGCCTGAGGAGTTTGAGAGGAGTTCAGGCGGAGCGTGTTCCCGCTGCCAGGCTACCTTCACGCACGCCTCCGATCTGCATAAACACGTCAAAGAAGTGCACGGCGCGGACGCGGAGCTGTCGTGCGCGGCGTGCAGCGCGCAGTTCGGCGGGCGCGCCGAGCTGGCGGCGCACGCGCGCTCGGGCTGCGCGCGCCGCCCGCACGCCTGCCCCGTGTGCGGCCACGCCTTCCGCACGCTGTCCATGCGCAACGAGCACCTGCGCGTGCACACGGGCGAGCGGCCCTTCCCCTGCGACGTCTGCGGGGTGGCCTTCAGGCGGTCCACGGCCATGCGCAACCACCGCCTCATCCACACGGGCGTACGCGCATGGGCATGTGCGCGCTGCCCCAAGCGCTTCCGCATCCGCTCCGACCTGCGCACGCACCTCCGGCTCAAGCACCCCGCCACCATCCTTGTTGTTGAGATGGAAGGCCTAAACCCCTCGTCGGAAGAGGTGATGAAGATGTTAGCGATACACAACGTACCGCACGACAAACTTATTGAAGTCACCAAGATGTCCTTTCCTAAGGGCTCGGCGCACGTGATTCCGTCGTCGGGCCGCGCGCTGACGGCGGCCCTAAGCGAAGTTCCACGCACACACGTGGCCTTCATCAAACCTGCTCCTTCACTACCAATGGAAGAGTTCCAGCCGGCGCGGCGCGGGCGCGGCATCGCCAAGAACCCGCGCCGGCCCAAGATCCTGCAGCGCGGCGACGTCCCGCACGACGCGCCCGCATACCCCATCGCCGTCAGCGAGCTGTCAGATTTGAACGTTCAATTACTTCTACGAGATGGCGTACTTGTGAATGGCAACCAAATGGTGCAGCTACAGCTTGACGACCCCATGCTGATGGAGTGA
Protein Sequence: MSETQPPLILCMENATGEDVALRVEPDDNFQMFLDKAKSLLGFDVDLNSITRNQPVSLSENVYQFLINAEQNLQADDLTQNFDQMLDNNDGPNDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDITDDIDIDSMNIQETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTIRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKTWNKPISYVDIDGVLIGESESQICFICGKHVDNSVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICEFCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFSFTHLGKAKEIINKIESKVTDKEEFVKVEIGSDGEIITKPIDNDPRSEDVIIVKDEKKDGSSSDVEIIEPEREIDNIIDNLEEADEEVKEFLGKYQCDNYEVTELKCRFCERIFADLAEVTEHCESHKHDLEDGEVFPCPLCNYGYANMKWLKGHLKAAHEKTEIVHKDDEKSKEENKEEGVTSPKASSPIATRTRSCSKKDGDKKDNDKPSEENKTDSNTESAEPPIIKTEVKQECIDSSEDEIWIVQTADAEGTQQLQKLLSGGKVDGQEGASQKTHKCFNCSQIFATADSLSSHRCRRRGRKRNSKDLVNLICIPSEEDFLKRAQGRPRPVCSTTDNDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHDTRNLITPEGRYCCSECDGATFATETELFDHVHFQHDKQKRWQCPVTGCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCARAFRDHAHAQEHATKSTECIEAFANELKEEAEEVTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSNVVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADAPPAAGPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCDLTFPNSWSLAYHRKKVHGKSGPDDPGTTSKISRDDYRIPCRDCDEILPNKTALYKHRKKEHSDGNIRTNNKQGYGPEEFERSSGGACSRCQATFTHASDLHKHVKEVHGADAELSCAACSAQFGGRAELAAHARSGCARRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACARCPKRFRIRSDLRTHLRLKHPATILVVEMEGLNPSSEEVMKMLAIHNVPHDKLIEVTKMSFPKGSAHVIPSSGRALTAALSEVPRTHVAFIKPAPSLPMEEFQPARRGRGIAKNPRRPKILQRGDVPHDAPAYPIAVSELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: -
80% Identity: -