Ppyg001038.1
Basic Information
- Insect
- Protodeltote pygarga
- Gene Symbol
- Mblk-1
- Assembly
- GCA_936440985.2
- Location
- CAKZFI020000009.1:1901811-1910154[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-14 4.7e-11 42.4 0.0 1 37 69 106 69 110 0.92 2 2 7.9e-19 6.7e-16 57.9 0.0 1 43 279 322 279 324 0.95
Sequence Information
- Coding Sequence
- ATGACTCTTCACAGACTACCAGAAGTGGGGGAGAAGGCGCCGGCGTCCTCATCTCCCAATCTTGCTGAGCAGCCTCTGGACCTGAGCGCCAAGTCTACCTCCAGCACCAGCGGCACACCTCCCCCCGATGCCAAGCTCTTGGATAACAGATTGAAACGTGCGGCTATCGAGAGTGCAACCAACAGCACAGGTCGCCGCGCCTACACTGACGACGAGCTCCAGTCGGCCGTGCGCGACATCCAGTCAGGCCGGCTCGGCACCCGCCGCGCCGCTATGATCTATGGCATCCCACGCTCCACTCTACGCAACAAACTCAACAAGTTTGGCACCATCATCGACCACGTAGACTCCGAAAACGACAGTGATGGCGAACGCCCCGACTCGCCTCCCTCCGTCATACTTAAAATCCCAACATTTCCCCCGCCAGACGATAAGAGCCCCTCACCCGCCGCACAAATCTTAGCCCCCATTGCGCCTATTACTCCAATTCATCCCACATCACAGACCTCGCTCAAGGCGCCCTCACAACTGTTGCTTCCACCCTCAGTATTTGCAGACCCTCCCTCAACACAACATCTTTTTACGTCTCTCAGTGACGTGATCGCTAAGAGCATAAGTCAAAAGTTCCAGCAGCCCCTGGAAAGGCCACATCATCAGCAGGCTGAGATGATGTATGGGCGTGGCCCCGACCGACACGTGTCCGTCATTAAGAACCCACCTGACAATCAACGTTACCCTGCGCCCGGCAACTCTAGAGCCACTCCAAACAACAACGGACAGCCAGCAGCTGGCGGCAAGGGCACGCGGCCCAAACGTGGCAAGTACAGGAACTATGACCGTGACAGCCTCGTCGAGGCCGTAAAGGCGGTGCAGCGAGGTGAGATGTCCGTGCACCGCGCCGGCTCTTACTACGGCGTGCCGCACTCTACGCTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGACCGCGAAAGCGAGAGCCTAAGCCACCACAGGACACCAAGCCGCAGCCACCGAAGCCACCGCCACCAAAACCTCCGACGAAACCATTCTCGAACGGACTCAACGGACCGGAGGCACCCGGTTATCCTCCCGGATATCCATTCTGGCCTGGAAGTGGGTTTCCTCCGCCCCCCGCACCTGACTTGTACGCCTCGCACATGATGCGACGACTGCGCGAAGAAGTGCCCCCGCCCGCCAACGGTTCGTTCTTGGAGGGCATCATTCGGTCGAGCCTAGAACGCCCCGCGCTGTTGCAGCGACTGGCAGCACCGCCGGGTGAACCGGTGAGACGGCCGGCCGCGGCGGACGGCGACGAGCCGCCAGCGCGACGACCGCGCCTCGACAGCTCGGACCAGGCGCTGGCGGCAGAAATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTTCGGCCGCGCAACGGAACGCCGACGCCGCCACCCGCGCCGCCGGCCGAGCCGCCGCCGCCGCCGGCCGCTCCGCCGGACCGCGCCTAG
- Protein Sequence
- MTLHRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAAIESATNSTGRRAYTDDELQSAVRDIQSGRLGTRRAAMIYGIPRSTLRNKLNKFGTIIDHVDSENDSDGERPDSPPSVILKIPTFPPPDDKSPSPAAQILAPIAPITPIHPTSQTSLKAPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPHHQQAEMMYGRGPDRHVSVIKNPPDNQRYPAPGNSRATPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEVPPPANGSFLEGIIRSSLERPALLQRLAAPPGEPVRRPAAADGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00450039;
- 90% Identity
- iTF_01424965; iTF_00000235; iTF_00450039;
- 80% Identity
- -