Atri002197.1
Basic Information
- Insect
- Abrostola tripartita
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_905340225.1
- Location
- HG996508.1:7475686-7484924[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 5.5e-11 42.3 0.0 1 36 83 119 83 125 0.92 2 2 1.7e-18 7.6e-16 57.9 0.0 1 43 294 337 294 339 0.95
Sequence Information
- Coding Sequence
- ATGCTTTGGCGGCCATATGACGTGTGTGTTGGTGAAATACGGTTCCCTTCAAGGAGGCTCCCGGAGGTGGGTGAGAAGGCGCCGGCGTCCTCGTCTCCCAACCTGGCCGAGCAGCCTCTGGACCTTAGCGCCAAGTCCACCTCCAGCACCAGCGGAACTCCACCTCCTGATGCCAAGCTCTTGGATAACAGATTGAAGCGTGCGGTGTTAGAGAGCGCCAGCAACAGTTCAGGTCGGCGCGCCTACACAGACGACGAGCTGCAGTCGGCCGTGCGCGACATCCAGTCCGGCCGGCTGGGCACCCGGCGCGCTGCCATGATCTACGGCATCCCGCGCTCCACGTTGCGCAACAAACTTAACAAATTTGGCTCCGCCGTCGACCACGCAGACTCTGAAATCGACAGCGATGCCGAGCGCCCCGACTCGCCCCCTTCAGTCATCCTCAAAATACCAACATTCCCCCCGCCAGACGACAAGAGCCCCTCCCCCGCCGGGCACATCCAAGCCCCCATCACGCCCATCACCCCGATGATCCCGACGCCGCAGACCTCACTGAGCGCGCCCTCACAGCTGCTGCTGCCGCCCTCCGTGTTCGCCGACCCGCCTTCGACTCAACATCTGTTCACATCTATCAGTGACGTCATCGCTAAAAGCATCAGCCAGAAGTTTCAGCAGCCTCTGGACAGGCCCCACCACCAGCCAAATGAACTTTTATATGCGCGAGGACCCGACCGTCACGTGTCCGTCATCAAAACCCCGCCAGATAACCAACGCTATCATCCCGCGCCTGGCAACTCTAAATCCACTCCCAACAACAACGGCCAGCCGGCCACCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACAGGAACTACGACCGGGACAGCCTCGTGGAGGCCGTGAAGGCCGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCGTACTACGGCGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAAGCCGCAGCCGCCCAAGCCGCCGCCGCCCAAACCACCGACGAAGCCCTTCTCGAACGGCCTCAACGGGCCGGAGGCTCCGGGCTATCCTCCGGGATACCCGTTCTGGCCCGGCAGCGGGTTCCCGCCGCCGCCCGCCCCCGACCTGTACGCCTCGCACATGATGCGGCGCCTGCGCGAAGAGGCGCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGGTCCAGCCTGGAGCGGCCCGCGCTGCTGCAGCGACTGGCGGCGCCCGCGGGCGGCGAGGCGCTGCGCCGCCCGCCCGCGGCCGACGGCGACGAGCCGCCCGCGCGCCGCCCGCGCCTCGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCGCCCGCGCCGCCAGCCGAGCCGCCGCCGCCGCCGGCCGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MLWRPYDVCVGEIRFPSRRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRAVLESASNSSGRRAYTDDELQSAVRDIQSGRLGTRRAAMIYGIPRSTLRNKLNKFGSAVDHADSEIDSDAERPDSPPSVILKIPTFPPPDDKSPSPAGHIQAPITPITPMIPTPQTSLSAPSQLLLPPSVFADPPSTQHLFTSISDVIAKSISQKFQQPLDRPHHQPNELLYARGPDRHVSVIKTPPDNQRYHPAPGNSKSTPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAGGEALRRPPAADGDEPPARRPRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01260028;
- 80% Identity
- -