Pazu004358.1
Basic Information
- Insect
- Protocalliphora azurea
- Gene Symbol
- nfxl1
- Assembly
- GCA_932273785.1
- Location
- CAKNZW010000106.1:1258430-1266753[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.1e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.13 1.4e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 1.8e-08 0.00019 21.6 16.0 1 18 206 222 206 223 0.98 4 20 1.5 1.6e+04 -3.7 2.6 6 10 249 253 248 253 0.89 5 20 0.00095 10 6.5 16.7 3 19 261 278 259 278 0.91 6 20 2.9e-07 0.003 17.8 12.3 3 19 315 331 307 331 0.88 7 20 0.83 8.8e+03 -2.9 0.5 1 8 356 362 355 363 0.50 8 20 8.7e-09 9.3e-05 22.6 10.9 1 18 366 383 366 384 0.96 9 20 0.31 3.3e+03 -1.5 0.4 1 5 393 397 393 402 0.75 10 20 2 2.1e+04 -5.0 2.3 5 10 407 412 407 412 0.91 11 20 0.00015 1.6 9.1 16.5 1 18 418 435 418 436 0.98 12 20 1.6e-10 1.7e-06 28.2 14.5 1 19 445 463 445 463 0.98 13 20 0.095 1e+03 0.1 10.8 9 19 508 518 499 518 0.88 14 20 0.0076 81 3.6 5.3 4 11 532 539 521 540 0.87 15 20 0.33 3.5e+03 -1.6 0.9 6 10 599 603 598 603 0.90 16 20 3.5e-06 0.037 14.3 5.1 1 11 609 619 609 620 0.96 17 20 0.76 8.1e+03 -2.8 3.1 6 11 636 641 633 642 0.85 18 20 0.024 2.6e+02 2.0 13.8 3 18 649 664 648 665 0.89 19 20 2 2.1e+04 -5.5 2.1 9 13 671 675 670 675 0.72 20 20 2.8e-07 0.003 17.8 12.9 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- ATGTCATCAACGAAGAACAAACAACAAAATTCTGCTAAAAATCCAACACAAAAATTCAATGAAACTCATGCAAGAAACATAGAAATCGCCAAAAAGCTGGTTGAAAATTATGTTTCATCTTCGGAAGATGAGGATGAATTGGATGAAAAAATTATTTTAAAATCCTTATACCAGCATTACAATACCCGCAAGGAAGATGAACATCTATTGTCTAAAACATCCGGCTTTTTAGAGAATGTTTTGCAAACCGGAGCTGCTACTTGTCTAATCTGTATTGGAAGTATAAAACGGTCAAATGCAATATGGTCTTGCAAATATTGCTATTGTTTCTTTCATTTAAACTGTATACGAAGATGGGCTAATGACAGTATGGCTCAGGCAAAGGCTCAAACACAAAACGAACAGGGCTATTATAATCATATGGGAGAATATATACCACCCAAAAAACCTAAAGCGCTGCACTGGTGTTGTCCACAATGTAGAAGAGAATTCCAACCTGATGAACGGCCAATGGAATATGAATGCTTTTGTGGCAAAGACATAAATCCACCCTCACAACCATGGTTAGTTCCACATTCGTGCGGTGAAATATGTGGCAAAGCTTTACAACCTAATTGTGGTCACAAATGTACGTTACTATGTCATCCCGGACCATGTCCACCTTGTGCTCAATATGCTGTTACTTCGTGTAATTGTGGAAAATCTCCACCGAAATCGGTACGTTGCGCCGAAAAGTTATGGGAGTGCCAGCAGAAATGTGAATTGCTGCTACCATGCAAAGAACATATATGCAAGAAGCTATGTCACAAGCCCGGCCACTGTCCACCATGCCAACAAACTAGTATGCAACCTTGTGAATGCGGTCGAGAGACTTTAAAACGCCAATGTTGTGAACTAAAATGGCATTGCAAGAAACGATGCGGAAGAACTTATTCTTGTGATTTACACAGTTGTGAAAAAGTTTGTCATTCAGGTGACTGTGGAGATTGTCCTTTAAGTTTACCACGTTCCTGTCCATGTGGTAAAACTAAAAAAGTAGGTCCTTGTTCGGAGATTATAGATACTTGTGGCGATACCTGTCAGAAGGTATTAGCTTGTGGTATACACACTTGTACGCAACGCTGTCATAAGGGAAATTGTAATTTGTGTTTGATCATAACCAAAAAGAAATGTCGCTGTGGGATGCACGAAAAGGAATTGCCATGTTCCAAGGAATTCACATGTGAAACAAAGTGTAAACAAATTCGAGATTGTGGCAAGCATCCTTGTAATCGTAAGTGCTGCGATCGAAACTGTCCACCTTGTGATAAAGTATGTGGTAAACCTTTATCCTGTGGTAAACATAAATGTCAATCAATTTGCCACAAAGGACCGTGTTATCCGTGTCAGCAAAAATCTCAAATCAACTGTCGCTGTGGTAAAACTAAAAGAAGCGTACCTTGCGGCCGAGAGCGAACAGCACGTGTGGTTTGTTTGGAATCATGTCGCATACCTTCAAAATGTCATCACGAAAATAAACATCGTTGCCACAAAAATGAATGTCCACCTTGTAGCCAACCCTGTGGTTTACCAAATGACACTACTAAGTGTGACCACAAGTGTACGGCAAAATGTCATGCATCAGTTAAAGTAGCTAAGAAATCAAATTCAGATACTACAAGTATATGGGAGCCTACTAAACAGTTTGAATTTAAGCAAATGCCTCATCCGCGTTGTGAACAAAAAGTTAGCGTAACTTGTATAGGCGGCCATGAAGTAGTCGATTGGCCTTGTTGGAATTCAAAACCTACATCCTGTCAGCGTTTGTGTAACCGTTCATTACGCTGTGGTAATCACAAGTGTTCTCTAGTCTGCCATGCAGTGCCAGATATAACAAACATGGAGCAACAACCTGGTTGTGCGCCTTGCGAAGAAGGTTGTCATATTCGTCGACCCGAAGGATGTACTCATAACTGCCCTAGACCCTGTCACCAACCACCCTGTTATCTTTGTAATGTTGCTATTAAAACTAAATGTCATTGTGGTCTAATGCCCGTTGTTTATAAATGCAGCGATTATTTCAATACAGAAGGCAGTGAAGGTGAAATATTGGAAAGACAAGAAAATTTAAAGAGCTGTGGAAATAGATGTTTAAAGAATTACCCTTGTGGTCATCGCTGCACCGCAAAATGTCATTCTGGTCCATGTCCATATCCCGAGTCCTGCCGCAAAAAAATACGCATCTATTGTGATTGTAAACGTTTAAAGTCAGAAATTTCCTGTGACAAACATCGTTCTGGGATGCAAAAATTGCATTGTGATGAAAATTGCGTTGAAATGCAAAAAATTTTAGAAGAAGCTAGGCAAAAGGAAGAAGAATTACGCCGCAAAGAAGAAGAAGAACGCAACCGTGTGGAAGTAGAACAATTTGAAAAAAAATTTAGCAAGCGCAAACCCAAAGAACGTAAAACGTTAGAAGTGAAACAAAAGAATCCCATTAATTGGAAGATTTTGGGAGTGTATGCGGGTATTATGGGAGCTGTATTGTTAGCGGTTGCCTTAGCTTTTTACGAAGATCATTAA
- Protein Sequence
- MSSTKNKQQNSAKNPTQKFNETHARNIEIAKKLVENYVSSSEDEDELDEKIILKSLYQHYNTRKEDEHLLSKTSGFLENVLQTGAATCLICIGSIKRSNAIWSCKYCYCFFHLNCIRRWANDSMAQAKAQTQNEQGYYNHMGEYIPPKKPKALHWCCPQCRREFQPDERPMEYECFCGKDINPPSQPWLVPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCAQYAVTSCNCGKSPPKSVRCAEKLWECQQKCELLLPCKEHICKKLCHKPGHCPPCQQTSMQPCECGRETLKRQCCELKWHCKKRCGRTYSCDLHSCEKVCHSGDCGDCPLSLPRSCPCGKTKKVGPCSEIIDTCGDTCQKVLACGIHTCTQRCHKGNCNLCLIITKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKTKRSVPCGRERTARVVCLESCRIPSKCHHENKHRCHKNECPPCSQPCGLPNDTTKCDHKCTAKCHASVKVAKKSNSDTTSIWEPTKQFEFKQMPHPRCEQKVSVTCIGGHEVVDWPCWNSKPTSCQRLCNRSLRCGNHKCSLVCHAVPDITNMEQQPGCAPCEEGCHIRRPEGCTHNCPRPCHQPPCYLCNVAIKTKCHCGLMPVVYKCSDYFNTEGSEGEILERQENLKSCGNRCLKNYPCGHRCTAKCHSGPCPYPESCRKKIRIYCDCKRLKSEISCDKHRSGMQKLHCDENCVEMQKILEEARQKEEELRRKEEEERNRVEVEQFEKKFSKRKPKERKTLEVKQKNPINWKILGVYAGIMGAVLLAVALAFYEDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- iTF_00332018;
- 80% Identity
- -