Cruf017069.1
Basic Information
- Insect
- Chrysomya rufifacies
- Gene Symbol
- nfxl1
- Assembly
- GCA_014858695.1
- Location
- JACGTJ010001767.1:14119-17563[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.8e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 21 0.13 1.2e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 21 1.8e-08 0.00016 21.6 16.0 1 18 206 222 206 223 0.98 4 21 1.9 1.6e+04 -4.0 2.3 6 10 249 253 248 253 0.88 5 21 0.00015 1.3 9.1 16.9 3 18 261 277 259 278 0.91 6 21 1.1 9.9e+03 -3.3 0.9 6 10 303 307 302 307 0.86 7 21 1.3e-09 1.1e-05 25.3 14.2 1 19 313 331 313 331 0.99 8 21 0.9 8e+03 -3.0 0.5 1 7 356 361 355 363 0.49 9 21 2.6e-07 0.0023 17.9 12.9 1 18 366 383 366 383 0.97 10 21 0.31 2.7e+03 -1.5 0.4 1 5 393 397 393 402 0.75 11 21 2 1.8e+04 -5.0 2.3 5 10 407 412 407 412 0.91 12 21 0.00015 1.3 9.1 16.5 1 18 418 435 418 436 0.98 13 21 1.6e-10 1.4e-06 28.2 14.5 1 19 445 463 445 463 0.98 14 21 0.22 2e+03 -1.1 9.7 9 19 508 518 499 518 0.87 15 21 0.0086 76 3.4 5.2 3 11 531 539 521 540 0.85 16 21 0.33 2.9e+03 -1.6 0.9 6 10 599 603 598 603 0.90 17 21 4.3e-06 0.038 14.0 6.0 1 12 609 620 609 620 0.97 18 21 0.76 6.7e+03 -2.8 3.1 6 11 636 641 633 642 0.85 19 21 0.0028 25 5.0 16.2 3 18 649 664 648 665 0.91 20 21 2 1.8e+04 -5.5 2.1 9 13 671 675 670 675 0.72 21 21 2.2e-07 0.0019 18.1 12.3 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- ATGCCACCAGCCAAGAACAAACAACAAAATGCTGTTAAAAATCCTACAGAAAAATTCAATGAAACTCATGCCAGAAATATAGAAGTTGCTAAAAAATTGGTAGAAAATTATGTTTCTTCTTCGGAAGATGAAGATGAATTGGACGAAAAAACTATCTTAAAATCTTTATATCAACATTATAATACCCGCAAGGAAGATGAACATCTTTTGGCTAAAACAGCCGGCTTTTTGGAAAATGTTTTGCAAACTGGAGCTGCAACTTGTCTTATATGTATTGGCAGCATTAAACGTTCTAATCCCATATGGTCTTGCAAATATTGCTATTGTTTCTTTCATTTGAACTGTATACGAAGATGGGCTAATGATAGTATGGCACAGGCTAAGGCACAAACACAAAATGAACAGGGCTATTACAATCATATGGGTGAGTATGTACCACCCAAAAAACCGAAAGCATTGCATTGGTGTTGTCCACAATGTAGAAGAGAATTTCAACCAGACGAAAGACCCACAGAATATGAATGTTTCTGTGGCAAGGAAATAAATCCTCCCTCACAACCGTGGTTGGTGCCACATTCTTGTGGTGAGATATGTGGTAAAGCTTTACAACCCAATTGTGGTCACAAATGTACATTACTTTGTCATCCTGGACCTTGTCCTCCCTGTGCTCAATATGCTGTAACTTCTTGTAAATGTGGAAAATCTCCAGCAAAATCTGTACGCTGTGCGGAAAAGTTATGGGAGTGTCAGAAAAAATGTGATCTGTTATTACCCTGCAAAGAGCATGTCTGCGAAAAGTTATGCCATAAACCGGGACAATGTCCACCATGCCACCAAACCAGCATGCAATCATGTGAATGTGGTCGTGAAATTGCTAAACGTAAATGTTGTGACTTGAAATGGCATTGCAAAAAACCTTGTGGAAAAACTTATTCCTGTGGCTTACATACTTGCAAGAAAGTTTGTCATTCTGGTGATTGTGGTCAATGCCCATTAAGTTTACCAAGATCTTGTCCTTGTGGCAAAACTAAAAAAGTAGGCCCTTGTTCTGAGGTAATAGATACTTGTGGTGATACATGTCAAAAACTATTAGCTTGTGGGGTGCATACTTGTACCCAGCGTTGTCACAAGGGAAATTGTAATTTGTGCTTTATTATAACTAAAAAACACTGTCGTTGTGGAATGCATGAAAAAGAATTGCCCTGTTCGAAGGAATTCACCTGTGAAACTAAATGTAAACAAATGCGAGATTGTGGCAAACATCCCTGCAATCGTAAGTGCTGCGATCGGAATTGTCCTCCTTGTGATAAAGTATGTGGAAAACCTTTGTCCTGTGGCAAACACAAATGTCAATCGATTTGCCACAAGGGACCTTGTTATCCGTGTCAACAAAAATCTCAAGTTAATTGTCGCTGTGGTAAATCCAAAAGAATGGTACCTTGCGGTCGAGAACGTACAGCACGAGTAGTGTGTTTGGAACCATGTCGTATACCTTCTAAATGTCATCATGAAAACAAACATCGCTGTCATAAGAATGAATGTCCAAGTTGTTCCCAACCTTGTGGTTTACCCAATGATACAACCAAATGTGAACATAAATGTATGGCTAAATGCCATGCTGCAGTTAAAGTAGCAAAGAAATCTAATGTTGATACTACAAGTGTATGGGAGCCTGCTAAACAGTTTGAATTTAAGCAAATGCCTCATCCTCGTTGTGAACAAAAAGTTAGCGTTACTTGTATAGGTGGACATGAAGTTGCCGATTGGCCTTGTTGGAATTCAAAACCCTCATCCTGTCAGCGTTTATGTAATCGTATCTTGCGTTGTGGTAATCACAAATGTAATCTAGTCTGTCATTCTGTGCCCGATATAAAAAATATGGAGCAACAACCTGGTTGTGCACCTTGTGAGGAAGGTTGCCATATTCCTCGTCCCGAAGGATGCACTCATAACTGTCCTAGACCTTGTCATCAACCTCCCTGTTATCCTTGTAATGTTATTATAAAAACTAAATGTCATTGCGGCCTTATGCCTATAGCCTACAAATGTAGTGAATATTTCAATACCGAAGGTGGAGAAGGAGAAATTTTGGAAAGACAAGAAAATCTTAAGAGCTGTGGAAACAGATGTTTGAAGAACTACCCTTGTGGCCATCGTTGTGCCGCCAAATGTCACTCTGGTCCTTGTCCCTATCCCGAGTCTTGTCGCAAAAAAGTACGCATTTTATGTGATTGTAAACGCTTAAAAATGGAAGTTTCATGTGACAAATATCGTGCTGGTATGCAAAAATTGCAATGCGATGAAAATTGCGTTGAAACACAAAAATCTTTGGAACAAGCTCGTCTTAAGGAAGAGGAAATAAGACGTAAACAAGAGGAAGAACGTAATCGTGTTGAATTAGAACAATTTGAAAAGAAATTTAGCAAACGTAAACCCAAAGAACGTAAAACATTAGAAGTGAAACAAAAGACACCAATTGATTGGAAATTGTTGGGTGTATATGCTGGTATATTGGGAGCTGTATTATTAGCAGTGGCTTTAGCATTTTATGAAGATCATTAG
- Protein Sequence
- MPPAKNKQQNAVKNPTEKFNETHARNIEVAKKLVENYVSSSEDEDELDEKTILKSLYQHYNTRKEDEHLLAKTAGFLENVLQTGAATCLICIGSIKRSNPIWSCKYCYCFFHLNCIRRWANDSMAQAKAQTQNEQGYYNHMGEYVPPKKPKALHWCCPQCRREFQPDERPTEYECFCGKEINPPSQPWLVPHSCGEICGKALQPNCGHKCTLLCHPGPCPPCAQYAVTSCKCGKSPAKSVRCAEKLWECQKKCDLLLPCKEHVCEKLCHKPGQCPPCHQTSMQSCECGREIAKRKCCDLKWHCKKPCGKTYSCGLHTCKKVCHSGDCGQCPLSLPRSCPCGKTKKVGPCSEVIDTCGDTCQKLLACGVHTCTQRCHKGNCNLCFIITKKHCRCGMHEKELPCSKEFTCETKCKQMRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQVNCRCGKSKRMVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPSCSQPCGLPNDTTKCEHKCMAKCHAAVKVAKKSNVDTTSVWEPAKQFEFKQMPHPRCEQKVSVTCIGGHEVADWPCWNSKPSSCQRLCNRILRCGNHKCNLVCHSVPDIKNMEQQPGCAPCEEGCHIPRPEGCTHNCPRPCHQPPCYPCNVIIKTKCHCGLMPIAYKCSEYFNTEGGEGEILERQENLKSCGNRCLKNYPCGHRCAAKCHSGPCPYPESCRKKVRILCDCKRLKMEVSCDKYRAGMQKLQCDENCVETQKSLEQARLKEEEIRRKQEEERNRVELEQFEKKFSKRKPKERKTLEVKQKTPIDWKLLGVYAGILGAVLLAVALAFYEDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- iTF_01259763;
- 80% Identity
- -