Basic Information

Gene Symbol
-
Assembly
GCA_932273785.1
Location
CAKNZW010000150.1:320441-354607[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.12 6.6 7.7 0.7 1 23 1759 1782 1759 1782 0.91
2 12 2.3 1.3e+02 3.6 1.0 1 23 1945 1967 1945 1967 0.93
3 12 0.00087 0.047 14.4 2.8 2 23 1970 1991 1970 1991 0.97
4 12 4.2e-05 0.0023 18.5 0.2 3 23 1999 2019 1997 2019 0.98
5 12 8.6e-06 0.00046 20.7 5.8 2 23 2026 2047 2025 2047 0.97
6 12 9.8 5.3e+02 1.7 0.1 5 23 2060 2078 2059 2078 0.96
7 12 0.042 2.3 9.1 0.1 2 23 2117 2137 2116 2137 0.96
8 12 0.0001 0.0055 17.3 0.4 1 19 2143 2161 2143 2165 0.95
9 12 5.8e-06 0.00032 21.2 1.8 1 23 2173 2195 2173 2195 0.99
10 12 0.00021 0.011 16.4 6.5 1 23 2201 2223 2201 2224 0.96
11 12 0.0012 0.067 13.9 6.4 1 23 2229 2251 2229 2251 0.99
12 12 0.0031 0.17 12.6 6.0 1 23 2257 2279 2257 2280 0.96

Sequence Information

Coding Sequence
ATGACTGAAAACGTTCAGTGTCCAGTATGTACTCTATACCTGCATGCAGGTATGAACCTTTCAGATCACTTGGAGACACATCCGAAAGAACAAGTGATTCGAGCTTTAGTACAAATGACCATATCTGGCAATGGAATTGGAGGTAACAATACTTTGGCCTCTGTTTTAGCTGGAGAAAATAGCAGTGCAGGCAATGGGACCAATAAACAAACTAACAACGAGTCGGATGAGAAACCTTTGCCAAGCCACAAAGACAATGAGCTTGATATTAGCAGTGCTGGTAATAGTTGTAGTGCCAGTTCAAGTAATTCTGCTAGCAATTGTTCAGTGTCAAACCAAAGTGTTAGTAGTAGTCAATGTTCAAATAACATATTAAATTTTTCCGCTACCAAAATCGAAAGACAAAATGAAATTGAAAGAGATAAAACACCAACAACTCCATCAACACAGTCTGCTAAAACTGTGGTTAAGACAGAAACAAATACGGTGGCAATGACGAAAAACAATTCAGCTGCTAATGAAAATGTGAACATATGTTTTCCCAAACAAAATTTCAATCAAACCAATTCTTTAAACTCTTCAAACTCTACAATAAGTGCAAGTCAATCATATCATCCAAACTCGATTGAATTGACAAATAACACTAATATTCATAATAGTTTTAACGTATTTGGCAGTAATTCTCGCTATGAGCAACAGCAGCGTAATGGCGTTAATAATCAAAATCAACTGTCTACACCACCACACATGCCACCACCGCCAGCACCAGCACCAGCACCAGCACCAGCAACAGCGCAAAGTCAACATCTTGGTCAATATCAAGAAGTAGGGCGAGGAATAATACCAGCGAGTTCAAGTGGAATATTTAATTCGTTGCAGCCACAACAATTGCCAGCACCCCCACCGCATCATACGTCATCTCATTTGGGCAGTACATCAAGTAGCCATCGTCAGACTCACATGTTTGCATCAGGACAACATCATCAACAAACGCCTCCGTCAAATTCTCATCATCAACAAAGTTTAAAGGTTATATATACACCCAATTTACCACCACCGCCTCCGCTGCAGCTTTTTACGTATCAACCACAAACACATTTGCAACATCATCAAAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAATCAAAATAAGCATCAAGTAACAGGGTCATTGGCAACGCAACAACAAAATCAGTCATTACAAGCACATTCAATTTTACAACAACCACAGCAGCAACAGCAGCAACAAGTTCATTTACAGCAGCACCAAACGTTGCAACACAATTTAAGAACTCATGTTCCACCTCCACCACCGTTACCGATTCCAACAAAGCATTCATATACCCCAAAAAACAATAGTTCGTCAATTCAACAACATACAACGACGACAACAACAACAACTCCAGCACCATCTAGACATAGCCAACTCCAACATCAGCAAATACCCAAAACAGATTTGTCTCAGCATCATCAGCAACAGCAGAAACAGCAGCAACAGAACCATCAGCGAGAACATCAGCAACCTCAAGCTAACTCTGATAATACAACACAAAATTCCAATAACCGGATTTTTAATTCCAATGAAAATCCAAATAAATCCCCAAAAGTAACATCGATATCGAGTGTGCAAAATTCAAATAATAATATTCCATCATATCCTCAAGTTTCGATTAGTCCATCTTCGGCTTCGGCATCAATAGCTGCAGTAGCTGCTTCAACATTGGGAAGACACACAAATTCACCATTTGCTGCTTTATTAGCGGCAGCAGCCGGTGCTCCATCACCTTCTAATGCATCGTCTGTTTTGCGGTACGCAGAGTCGCCTGTAGCTCATTATTTAGAGCGTGAAAATGGCGATTTTATAGTACAAGAAACTCCCAAACATATTGTTGAATGTGTTGAAACCGACAATGGAGAGTTTTCGGTCATTGAACGCATATACCAGTCACCACCCAGTGTTTTACACATACATGACGACGATGATGATGATGAAGACGAGGGTGAAAATAATCCCGACTATCATGGTGGCCAGGTTGAGAAAGAAAAGCATGAAAATGTTGAAAGTAAGTCTAAAAAAACAGAAAATGACGGTGAAAAAATAAAAGATGAAAAGGGAGATAAGCAAAGGCAGAAGAAAACTTCTTCAAAAGATGATAAAAAAATATCTGTTGAAACAAATAAGCATCATAATAATAAGAAATCTAAGGTTAATGACGAAACATCTAGTGATAATGATATTGTGGATTTTGTTAGCATATCGAGTGACAGCGGCGACGAAGAGGAATTCATATCGCAGGAACAAAAGGATCATCAAAATACCACCGAAAAGAAAAAAAATAACCAAATATCCGCCACCTCCACATTTTCAACGCCAACCACACCAACATTATCCTCTTCGACTTCAACAACTGCACCTTCATCCATAACAACAAGTGGTGGTGACATTCAACCATCAACTCCTATATTATCATCTTCATTGCAAACTACTTCTTCATCTTCGACCATGGCGAATACTACCCAAACACAACAGAACTCTGGGGCCACCACTAACAATAGCGTCAGTAGAAAGAAATCATCGAAAAACACTATTACCGTCTTAAGTGACGTTCAATTAAATTTAAATGAATATTTAGATTTGGTGGGCAATATAATTGCTTCGAGCAAAGTAGCGGCTGCTCAACGTAAAACATTTGCAACTATAGCTCCAATACCTATGGTGAAAATTGAAAAAGAGGAACCTATGGATGAATATATAACAAACCCAACAACATCAACAACAATTCCAATAAAAAAAACAAATTTTGAAACTTCGCCACTACAAACAACACCTCTAAAGGCCAACAAACATGAGACTGAAGAAATAACTGATACCCCTAGCAGTAGTAATAATAGTAGACAAACAATAAATAATAATAACCATAATGTTATATTAACAAATGATATAGAACATGACGAACAAGAAGAGAAAAAACCTCAGGTCTTCGAAAATGTATCGGAAAATGAAACCACACCTGCTAATGTTATTTCGAACACCTCTTCTAGCCTAATGACTACAAATTCCAGTCATGTTACCAGTGTTATACGTATGGCTACAACTAGTCAACACCAACACCAAGCCCAACAAACCCAGCAACTACTACAGCAGCTGAATTCTTTGGAAAATAATAAAAACTCAACCGAAGCTGAGGATCTCTCTCAACCCCAACGTAAAGTTCAATCTATGGCAAATGTTAAATATTTAGGTCATCAGGTGCCATTGGCTCGTAAAGGTCCTAAAAAACTAGTTATTAAGCCAAAATCTTCAAAGACTGAAGTCTTGCCCAGCACAACCACTTCATATAATCAATTAGATAACGCTCAAGAAATACCCACAACTTCGAATAAGGCTAGACAAGAATATATAAAACAAACATCCGCGGACGAAGACGCGTTAAATGCCACCGATATAAAAGTTAAAAATGAACCCATCACTTCTATAACATATGAAAATCAACAACAGCAACAACAACACACTTTCTATCAACCAACTACAAGTTTCAGTATATTGGAACAACATCTCAATTCTAAAGAACCTCCTATACTCGAGTTTAAAGAGGAAAAACCTTGCATACAAGAAGCTAGTGTACCGCCTACGTCAATAATAAAAGAAATGAAAGTGGAAAATAATGTTAACGATGATGCTCGTGTTCTTTATGATTTTGCAAATTCGAAAAAATCGCAAAACGAAACACCTTCTACTACTTTTCCTTCATCCACATCTTTATTTTCCACCAAACAAACTTCATTAGAAACAACACCAACTGAAGAGGTACAGCAACAACAGCAACAATTAACTAAGAACTTAAATCACGACCATGATACAACGTCTTCGTCTACATCAACATATTCATCACAATCGGCTACGGATGCTACCATGCCACCTGAAGATCATAATGAAAATTCAGCTACAGCAAATACGCCAACTCAACATCAATCCAATCAGATGTATACCGATTTTCACTTCAACTATTTGTATAATAATGGTGGATGTAACGTGAGCGCGGTTGCTCCTGAACAAGTCGACATAAAAAACCCTCAAGAATTTACAACATTTTATCATAATTCTGGAAATAATAACAATTCCATGTTATTGGAAGACTCATCATCTAGCAGACATTATACAGATTTCCAACAACATAATAATCAGCATCATAATCAGCAGCAGTTACAACAGCAACAACATCAATCTGCTGGAACATCACACAACCAATGGTTTAATAACAGTAATAATTACCAAACTTCTGAACCTAATATTACACCAATCACTTCAAATCATTCAGTTTCTAACATGAACAGTGCTTTGTCCGTTGATGGCAATAGCGCTGCTTTGGATGGCACTGAAGTTAGTAAATACTTAGATTTAGATTCATGTAAACGTGAGCAAAATATTGATTTAATTTCTGGCGATCGCGTTACTGTACCACCACCGCCCCCTCCATCTTCCTCAACATCGTGTTCATTTAATGGTACAACAGACAGTATGGCTGGTGTCTGTCCAACGGCAGTCACTCTTAATATACGAACAGATGAGAAAATGCCAGCGAAAGGTGAAATATCCGAACAGGAAAGTAATTGCGATATAGATAATTCATGGAGTCAACCGATGTATGGCGATATTTCTGCTCGTTTCTTTAAGACAACATTTCCGGGCATATTTCCACAAGATAACGGCTGGAATCATGACGAATATTTTACTGTACAGGATTTAAGTGCCTCAACAACTGCACAAGCTACTAACAGTGGTAGCAGTAGATTGAAAAGTTTTGAGCCCTTAAACAGCAGTAGTAGCAACAATAACAACAGCAACGGAATGCCAATATTTTCTCAAAATTCCAATGATAATTGCAACATTGATGTAATGCCATCAACATCAGCTAAAATACGCAAGAGACGTAAACGCAGTTCTCAAGATGGCAAAGTGTCACAAACGAATGGTAAGCGCATGCAGCCAACATCGACAGTTACGTCACAACAAATGATGATGCAACATCAAAATGGAATAACAGGGGTTGAATTTAATTTCCAACATCAACAGCAGCAACATGAAACTCATTTACAGGCACAACAACAATTGCAAGAACCCAGCACATCATCAGCATTTTTGGCTGGATCATCAAATGCTAGTACTGGCTTTATGATGCAACAACAACAGCACACGCAACAAACACAGCCTCAACAACACCAAACACAACAGAAACAACGCACAAAAGTTTATGAATGTGGTCATTGCAATGCCAAGTATTCTAAACTAAAAGATCGTAATGCTCACATGGTTGATGTTCACAACTATATACGCCAAAATAGAAGACTGGTATGTCCCACAACTGGACTTGCCACACCCCTAACGAATTCTGATATGCAAGATGTTGCTTTGCCCACAACAAGTGCTGCTGGCAGTATATTAATGCCCCCTATACAAAATGCCGACTATATGAGCGATTGTAAACAAGGTATTGTGAAAATAGAAAATGAAAATATACAACGTGATCTAACAGGTGTGGAATCAATCAATGCTAATTTAAGTGCTAAAAGTGAATTTATGGAAGACGATAAACATAATTTAGCCCTAGTACCATTGAGTGCAGGAAATACCGAAACAAATCTTGAGTGTGATACCAAACCACCAAGCAATAATTTGCCATTGTCATTGACAACACCCACTAGTAAATTAACAACACTCTATCGTATGCTGGTATCCTTCAATATGACAACATTGAAACAAAACCAAAGACTTTCTGAGTTCGATGAGAATCTTATAAAATCATCGATATTCTTCTGTTACATATGTCGGCAAAATTTCAATTCGGTGAAATTATATGATGCTCATTTGACCGAACATCCGGCTGAATGTTTTACGTGTGGCAAAAAATTCCAACGTTGGAAGAATTTTTCACTGCATTTAAAACGTCATTTGGGTTGGAAGGAATTCGGTTGTACGGTATGTGATAAAAAATTTGTTGTACGAAGTGCTCTCGTTGAACATATGCGTATGCATTCCGGTCTATCACCATTGAAATGTAAAGTGTGTGGTAAACACTTTAAGCGCTATTCCAACTTAACTCAACATCGTAAGCGTCACACGAAACAAATTGTTCGTAGGAAAGAATACGTTTGTTATTGTGGCGAAGTTCTACCATCCAAAGCACGCTTCTTGTGGCATAAGGAAACTCATGACTCCAAACCGAAATGTTGTCCACATTGTTGTGATCGTTTTGTGCATGTCAACTCTCTTCGACGTCACATACGTCTCGCCCATTCAGATAAATTCGATTACACCGAACCAATGGAGTGTCCCATTTGCAAGCAGATCTTTGCTAAAGCCTCTATGAAAGCTCATATGGCAACGCATTCCACAGAAACTCAATACGATTGTGCTATTTGCAACAAGTCCTTCTCGACTAAATGGAATTTAAAGATACATTCGTGGGTACATGCAAATCGTACCGCCAAACCTTTTAAATGTGAACACTGCCCCAAGGCATTCGTGCGTGAGGTCGATTTTAAAAATCACATGAATTCCCACAAACAAATTAAACCATACACCTGTGAAGTGTGTGGCTGCAAGTTTATACGCAAATACAATTATATGCGCCATAGAAGAGAGCATCATGGCAATAAAAAGTATACCTGTGATCTATGTAAAAAATCGTTCCATCGTCACTATTATCTCATCGAGCATAGACGCATACATACCGGTGAACGACCTTTCCAATGTACGATTTGTGGTAAAAGTTCAACAACCAAAACTAATCATAACAAACACTTAAAGATTCATCATTCAAGAGATCCTTTTACAGTGGAAGTATAA
Protein Sequence
MTENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGNGIGGNNTLASVLAGENSSAGNGTNKQTNNESDEKPLPSHKDNELDISSAGNSCSASSSNSASNCSVSNQSVSSSQCSNNILNFSATKIERQNEIERDKTPTTPSTQSAKTVVKTETNTVAMTKNNSAANENVNICFPKQNFNQTNSLNSSNSTISASQSYHPNSIELTNNTNIHNSFNVFGSNSRYEQQQRNGVNNQNQLSTPPHMPPPPAPAPAPAPATAQSQHLGQYQEVGRGIIPASSSGIFNSLQPQQLPAPPPHHTSSHLGSTSSSHRQTHMFASGQHHQQTPPSNSHHQQSLKVIYTPNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQNKHQVTGSLATQQQNQSLQAHSILQQPQQQQQQQVHLQQHQTLQHNLRTHVPPPPPLPIPTKHSYTPKNNSSSIQQHTTTTTTTTPAPSRHSQLQHQQIPKTDLSQHHQQQQKQQQQNHQREHQQPQANSDNTTQNSNNRIFNSNENPNKSPKVTSISSVQNSNNNIPSYPQVSISPSSASASIAAVAASTLGRHTNSPFAALLAAAAGAPSPSNASSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDDDDEDEGENNPDYHGGQVEKEKHENVESKSKKTENDGEKIKDEKGDKQRQKKTSSKDDKKISVETNKHHNNKKSKVNDETSSDNDIVDFVSISSDSGDEEEFISQEQKDHQNTTEKKKNNQISATSTFSTPTTPTLSSSTSTTAPSSITTSGGDIQPSTPILSSSLQTTSSSSTMANTTQTQQNSGATTNNSVSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAAQRKTFATIAPIPMVKIEKEEPMDEYITNPTTSTTIPIKKTNFETSPLQTTPLKANKHETEEITDTPSSSNNSRQTINNNNHNVILTNDIEHDEQEEKKPQVFENVSENETTPANVISNTSSSLMTTNSSHVTSVIRMATTSQHQHQAQQTQQLLQQLNSLENNKNSTEAEDLSQPQRKVQSMANVKYLGHQVPLARKGPKKLVIKPKSSKTEVLPSTTTSYNQLDNAQEIPTTSNKARQEYIKQTSADEDALNATDIKVKNEPITSITYENQQQQQQHTFYQPTTSFSILEQHLNSKEPPILEFKEEKPCIQEASVPPTSIIKEMKVENNVNDDARVLYDFANSKKSQNETPSTTFPSSTSLFSTKQTSLETTPTEEVQQQQQQLTKNLNHDHDTTSSSTSTYSSQSATDATMPPEDHNENSATANTPTQHQSNQMYTDFHFNYLYNNGGCNVSAVAPEQVDIKNPQEFTTFYHNSGNNNNSMLLEDSSSSRHYTDFQQHNNQHHNQQQLQQQQHQSAGTSHNQWFNNSNNYQTSEPNITPITSNHSVSNMNSALSVDGNSAALDGTEVSKYLDLDSCKREQNIDLISGDRVTVPPPPPPSSSTSCSFNGTTDSMAGVCPTAVTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHDEYFTVQDLSASTTAQATNSGSSRLKSFEPLNSSSSNNNNSNGMPIFSQNSNDNCNIDVMPSTSAKIRKRRKRSSQDGKVSQTNGKRMQPTSTVTSQQMMMQHQNGITGVEFNFQHQQQQHETHLQAQQQLQEPSTSSAFLAGSSNASTGFMMQQQQHTQQTQPQQHQTQQKQRTKVYECGHCNAKYSKLKDRNAHMVDVHNYIRQNRRLVCPTTGLATPLTNSDMQDVALPTTSAAGSILMPPIQNADYMSDCKQGIVKIENENIQRDLTGVESINANLSAKSEFMEDDKHNLALVPLSAGNTETNLECDTKPPSNNLPLSLTTPTSKLTTLYRMLVSFNMTTLKQNQRLSEFDENLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKQIVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01194734;
90% Identity
-
80% Identity
-