Basic Information

Insect: Protocalliphora azurea
Gene Symbol: -
Assembly: GCA_932273785.1
Location: CAKNZW010000463.1:565466-567805[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00013 0.0069 17.0 1.1 1 23 445 468 445 468 0.94

2 7 0.007 0.38 11.6 3.0 2 23 474 495 474 495 0.97

3 7 9.5e-05 0.0052 17.4 4.3 1 23 501 523 501 523 0.97

4 7 0.063 3.4 8.5 6.4 1 23 529 551 529 551 0.97

5 7 0.00067 0.037 14.7 1.7 1 23 557 579 557 579 0.97

6 7 1.3e-05 0.00072 20.1 0.1 3 23 587 607 585 607 0.94

7 7 9.7e-06 0.00053 20.5 5.4 1 23 613 635 613 635 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00013	0.0069	17.0	1.1	1	23	445	468	445	468	0.94
2	7	0.007	0.38	11.6	3.0	2	23	474	495	474	495	0.97
3	7	9.5e-05	0.0052	17.4	4.3	1	23	501	523	501	523	0.97
4	7	0.063	3.4	8.5	6.4	1	23	529	551	529	551	0.97
5	7	0.00067	0.037	14.7	1.7	1	23	557	579	557	579	0.97
6	7	1.3e-05	0.00072	20.1	0.1	3	23	587	607	585	607	0.94
7	7	9.7e-06	0.00053	20.5	5.4	1	23	613	635	613	635	0.98

Sequence Information

Coding Sequence: ATGCAGACTAAAGTGCAGAATATGAGAAGCTTCCAAGGATACACGAAATGTGGCGAAATATTAAAACCTCCAACAGAAAGTTATCAGCGTCCATATGTTCTGAAATGTTTCCATTGCAAGGAAATATATTTACTATTTGAAGCATTTATATTTCATATCGAAGATCATTGCAAAAGTGCAATTGCAGATGAAACTCCTAGTGCTAAAGAAATTTCTGATAATATCCAAAATGACACAGCCGCCGAAGAGCAAATCCATTTATTGAACCAAATTGACGATAGAAATGTAAAAGTAGAAAATATTGACAGTGCCTTGCAGACTTCGGATCCCTTGATTGTCGTAAAACCTGAATATTTTTCTGACAATGAGTGCTCTTTAGTGAAAGAAGAGATAAAGTGCCCCGATGTTATGATAAATAATTTTAATGATGAAGTAAGTAATTTAACAACAGTTGAGGAAGTATGTGAAACAGATGATTCCATGGAAAATTTAGATAAAATTGATGAAGTATTTTCAGAACATAGTTCTGACGAGGAAATGGCAAATAGCTCATTTAATAGTTTGTCATGTGATGAGGATGATGAATACGAAATTAAAAAATCGAAAAATGAATTGGACTACCCTAAAAGGCAGTCAGTGTTTATAACAGAATTTTTTAAATCAAAGACGAATGTAAATGCTCTAATTCAGGCCTACAAAAATCAACCATCATTATGGAATAAAAATTTTCCATTTTTAAGACATAAATTAAAACGTCAAAACATTTTGCAGCAAATTGCTCAGGAACTTAATGAACAACATAATATGAAAATTACATGGAACCAAGTAGCAAATGTTGTTGTTTATTTGTGTCGAAAGTATCGCGAGGATTTAAAAGGCATCAAAAATAGTAAAGATGGTGAAAAAAACTACACTCAGTCATGGTTTTTTGAAGATTTGAACTTCTTAAAACCCTTTATGGAAAATAATCCCATAGCAAAAATAGATTCACATATGCCAGATCTATTACCAGATCAAATAATACAAATATTAGAAATATATAAAGGATTTCCTCATCTTTGGAATACTCAACTGATTGAACATTATTGTAAAAATAAAACAAATGCGGCCAAACAAGAAATGTTGCAACTTTTAGAAACGAATATGGGTTTAAAAATTACTGAACCTATTTTAGAGGATTATTTTAGAACCATAAATAATTGTTTTACACGAGCTAAACGTAATAAAACGGAAAATAAATCTAACAAGAAAAATAAAGATTTAGCAATAGAAGACAATACACAGGAAGACTATTATGAACATATGATTTTCCTATATGATCATGTAGGTTTCTTTAATTGTTCTGAATGTCAGCGGTCTTTCAAAAGTCCACTGTACTTAAAAATACACCAAAGTCAGGATCATGGATTCGAACCGCCTACGTGTTCTCTATGCAAAAAGCAATTTAAAACAGTAAATTCTTATACAAATCATGCCAAACGTCACATGGAAGATCTTAATCATGAGTGTAAAGAATGTGGAAAGAAATTTTTACATTCTAATGAGTTACGTATACATATGCGCAATCATACGGGTGCCAAACCTTTTTGTTGTGAAATATGTGGAGCTTCATTTCGGCATATACAAGTTTTCAGTAATCATCATAGACGTCATATTAAAAATTACTTACATACATGTGAAATTTGCAGCAAGGGTTTTTATTCCAAAGGTCGTTATAACGATCATATGAATGCTCATTCTAATATACGTTCGCAAATATGTAATGTATGTGGCAAAGCATTCATAACAAAGAAATCATTGCAGCAACATGTCGTTATACATGATGATGTACGAAAACATTCTTGTAAATTATGTGGGAAAACGTTTAAACACAAAACCGGAGTCATCCAGCACATGAGAACACATGGCATAGCTAATAGTGAAGAAAGGAGCACTGCTAATAAAGAATAA
Protein Sequence: MQTKVQNMRSFQGYTKCGEILKPPTESYQRPYVLKCFHCKEIYLLFEAFIFHIEDHCKSAIADETPSAKEISDNIQNDTAAEEQIHLLNQIDDRNVKVENIDSALQTSDPLIVVKPEYFSDNECSLVKEEIKCPDVMINNFNDEVSNLTTVEEVCETDDSMENLDKIDEVFSEHSSDEEMANSSFNSLSCDEDDEYEIKKSKNELDYPKRQSVFITEFFKSKTNVNALIQAYKNQPSLWNKNFPFLRHKLKRQNILQQIAQELNEQHNMKITWNQVANVVVYLCRKYREDLKGIKNSKDGEKNYTQSWFFEDLNFLKPFMENNPIAKIDSHMPDLLPDQIIQILEIYKGFPHLWNTQLIEHYCKNKTNAAKQEMLQLLETNMGLKITEPILEDYFRTINNCFTRAKRNKTENKSNKKNKDLAIEDNTQEDYYEHMIFLYDHVGFFNCSECQRSFKSPLYLKIHQSQDHGFEPPTCSLCKKQFKTVNSYTNHAKRHMEDLNHECKECGKKFLHSNELRIHMRNHTGAKPFCCEICGASFRHIQVFSNHHRRHIKNYLHTCEICSKGFYSKGRYNDHMNAHSNIRSQICNVCGKAFITKKSLQQHVVIHDDVRKHSCKLCGKTFKHKTGVIQHMRTHGIANSEERSTANKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259246;
90% Identity: iTF_01261367;
80% Identity: -