Pazu005959.2
Basic Information
- Insect
- Protocalliphora azurea
- Gene Symbol
- ftz-f1
- Assembly
- GCA_932273785.1
- Location
- CAKNZW010000147.1:517841-538013[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-20 2.1e-16 60.6 0.8 1 78 30 107 30 134 0.67 2 2 6.4e-55 4.5e-51 174.8 2.2 155 360 209 407 185 409 0.89
Sequence Information
- Coding Sequence
- ATGAAAATTGTTATGCATTCTCATTTGTGTTGTTGTCGTGCGGTAGATTGCATTTTTTATTTGGTATACTCCTCGTTTGTTTTGGTGGCTGTGAGAGCCGATCGTATGCGCGGTGGTAGAAATAAGTTTGGACCCATGTACAAAAGAGATCGAGCGCGAAAATTGCAAGTAATGCGACAAAGACAAATAGCATTACAGGCCTTACGTACCTCAATGGGAACGGGAGAAATGAAACCAACACCTCTATCGCCCGGTTATCAGCAGGCCTATACAAATATGAATATAAAACAAGAAATACAAATACCTCAGGTATCCTCTCTAACACAATCACCCGACTCATCACCTAGCCCCATTGCTATTGCCTTAGGTCAGGTTAATGCCAGCTCTGGTGTGATAGCGACACCTATAAACGGCAATAGTGGTGCTGGTGGTGGTGGCGGCGGCGGTGGAGGCGGTGGTGGTGGCAATAGTGGTAATAATAATAACAACAACAGCAGCAATACAAGTGATGGTATCAACCGCATTGGTAGTGGCAGTGGTGGTGGCAGTGGTAATTGCCATGAAACTGGCACAGGATCCTTACAAAGTGCCAGCGATTCAAAATTGTGCTTCGACTCGGGCACTCATCCTTCTAGTACCGCCGATTCCATAATAGAACCTCTAAGGGTCTCACCGATGATCAGGGAATTTGTACAGTCAATAGATGACAGGGAATGGCAAACGCAATTATTTGCTTTGCTGCAAAAACAAACGTACAATCAAGTTGAAGTGGATCTCTTTGAATTAATGTGTAAAGTTTTAGATCAAAATCTATTCTCCCAAGTTGATTGGGCCCGTAATACTGTGTTCTTTAAAGATTTGAAGGTGGACGATCAAATGAAACTTCTACAACATTCATGGTCTGATATGTTAGTATTGGATCATCTACATCAGCGCATACACAATGGCCTGCCCGACGAAACTCAACTCAACAATGGTCAAGTCTTTAATCTCTTAAGTCTGGGCTTGTTGGGCGTACCACAGTTGTCTGATTATTTCAATGAGTTGCAAAATAAATTGCAAGATTTGAAATTTGATATGGGCGATTATGTGTGTATGAAATTTTTAATTTTATTAAATCCAGATGTTCGAGGTATTATCAATAAGAAAACTGTATTGCAGGGTCACGAAAATGTACAAGCAGCGTTATTAGATTATACATTAACGTGTTATCCATCTGTGACGGTAAGTTAA
- Protein Sequence
- MKIVMHSHLCCCRAVDCIFYLVYSSFVLVAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQIALQALRTSMGTGEMKPTPLSPGYQQAYTNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASSGVIATPINGNSGAGGGGGGGGGGGGGNSGNNNNNNSSNTSDGINRIGSGSGGGSGNCHETGTGSLQSASDSKLCFDSGTHPSSTADSIIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHQRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLSDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIINKKTVLQGHENVQAALLDYTLTCYPSVTVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01259268; iTF_00716748; iTF_00716778; iTF_01231661; iTF_01231622; iTF_00679575; iTF_00679535; iTF_01109373; iTF_01109394;
- 90% Identity
- iTF_01176970;
- 80% Identity
- iTF_01259268;