Pinq017048.1
Basic Information
- Insect
- Prosopocoilus inquinatus
- Gene Symbol
- stc
- Assembly
- GCA_036172665.1
- Location
- CM069874.1:4067887-4072055[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 3.5e+04 -4.1 1.6 15 19 367 371 366 371 0.81 2 15 0.078 1.4e+03 0.4 0.4 4 10 400 406 399 408 0.95 3 15 1.8e-06 0.033 15.2 15.8 3 19 414 430 406 430 0.85 4 15 1.6 2.9e+04 -3.8 1.4 6 10 456 460 456 460 0.96 5 15 1.4e-06 0.024 15.6 11.7 1 19 466 484 466 484 0.97 6 15 9.9e-09 0.00018 22.4 16.4 1 19 524 542 524 542 0.98 7 15 1.6e-05 0.29 12.2 15.2 4 19 589 604 582 604 0.87 8 15 1.1 2e+04 -3.3 2.2 5 10 633 638 633 638 0.93 9 15 0.11 1.9e+03 -0.0 5.9 3 11 646 654 644 656 0.88 10 15 1.3 2.4e+04 -3.6 1.1 4 10 659 665 658 665 0.73 11 15 8.4e-09 0.00015 22.7 9.2 1 19 671 689 671 689 0.98 12 15 2 3.6e+04 -4.2 1.3 6 10 718 722 717 722 0.76 13 15 0.0029 51 5.0 11.5 1 19 728 745 728 745 0.84 14 15 1.3e-08 0.00024 22.0 18.3 1 19 781 800 781 803 0.96 15 15 0.0008 14 6.8 16.7 3 19 811 829 810 829 0.93
Sequence Information
- Coding Sequence
- ATGTCTTACTGGAATCCGAACTACATCCCTACACCCAACTATCAACCCAGCGGCGACGATTCGATGTACACTGACCCCGGACTGTACACTACTATGTTTAATCCGTACACCGAAAACGGTGGCAGTTATTACACCACCCCCCAATTTACTCACAATTACAATCAAAACATCCCCATGAATTTTTACAATAGTACGATGCCAAGCATGGAATCTCATCAGCGTTttaacagcaacaacaacatTCAGGGAAATCAAGCGAATGCCTACGGCGTCGGAGCCAGCAACGGTTATAATTTAAGAGTCAATTCCGCTCAGGTTAGAGAATCTAAGCTGACACCTACTGCAGAAGAATTCAGACCTCGAAATATGAGTTACTATACTACGGAGAACGGGGCAAGCGGTGGCGCTGTTAAGAAACCCTTCAGTAATTACGGCAAGAACAAAAAGAACCAGAACGGAAACGAGCAGCAGCAGCAGTGGTCCGCTGGGGGTTCATCAAGGCAAAACAATGCCGAAAGATACGAAAGCCAGAGCTACTACaaacagaaacgaaaaggttacggtaataaaaacaatgaacaGAATAGAGCGCCGGATGATGCTTCCATGTATGCAGTAGCAGTAGAGGAAAAACCAAGAGACGAGGGGGAAGTGCAGGGAGGTAATAATGAAAGGTTTTATGATGGGTATAAAGCGAGGGGCTTCGACAGGCACGGTAAAAATTGGAATAACGGTAAAAACGGCGGCGATtactcttataaaaaaaatggcggCAGGAATAAATATGATAAAAAATATGAGGAGCCGCATGAGAAGCGTGAAAACGAAAACTGGAGGCAAAATATGACTGTTCATGCAAGCAACTGGGAGGACAAGAAGGATGCGAACCCACAGgaacttaaaaagaaattcGACGCAGCCTCTCAGAGAGAACGCTTGGTACAAATGGTAGAGCGCCGCCTCTTAGAATGTCTGGTTTGCTGCGAACGTTTGCGCCACAGCGATTCAATTTGGTCATGCAAGCAATGTTACCACATCATCCACTTAAACTGCGTCATCCGTTGGGCGAAAACATCGAAGCTGGAGACCGGTTGGAGATGTCCGGCTTGCCAGAACGTCTACTCCAACATCCCCAACGAGTACCGCTGTTACTGTGATAAAACATTGCAGCCCCGCCTGGAACTCGGGACGCTTCCACACAGCTGCGGGGAAGTGTGCGGGAGAAAGGGGCGCTCCTGCGAGCACACTTGCACTTTGCTGTGCCATCCGGGGCCCTGTCCGGAATGCACTATTTTAACACCGAGGGCGTGTGGCTGTGGCTCAACGAAACCGACTGTGAAATGCAGCTCTGATGTTCCTATTATCTGTCAGAATGTATGTGGGAAGGTTTTGGAATGTGGTTTGCACAATTGCGCTAGTAATTGTCACGTGGGGAAATGCGGAGATTGCAAGGAAGTTTTGAAGCAGGAATGCTACTGCGGGAAAGTTGGGCGAAAAGTGCCTTGCACTTCTGAGACGAAGGGGAATTTGCGGTATGATTGCGGGGAAGTGTGCGGGAAGCTCTTGCCTTGTGGAAATCACCATTGTGAGGCGTTGTGTCATCCAGGGGAATGTTCGCCATGTCGCACGTCTCCATCGGTGATTACGACTTGCCCCTGCGGGCAAATGAAACTGACATCCGAAAGAAAATCCTGCACGGACTCAATTCCCTGTTGTGATAAGGTTTGCAATAAGATTTTAAAATGCGGCCAACCTAGTGCTCCTCACCAGTGTCAGAAGAGATGCCACAAAGGCAAGTGTCCACGATGTCCTTTAACTACCCTCGTGCGGTGTCGCTGCGGCCACATGGATAAAGAAATTGCATGTCGTGAGCTTAAAACCAAGGCAGATGATGCACGCTGCCAAAAGAAGTGTGTTAAGCTGCGGCTTTGTTATAAGCACAAGTGCAACCAGATGTGCTGCATCGAAGTGGAACATGTGTGCCCTCTCCCTTGCAATCGCATGTTATCTTGCGGCCTACATCGTTGCGAAGAGACCTGCCATCGAGCGCTTTGCCCCCCTTGTTGGCGCACCAGTTTTCAAGAGTTGTACTGCGAATGTGGTGCGAGCGTCCTGTATCCCCCGGTTGCTTGCGGAACACGGCCTCCACCTTGCAATAAGCCGTGCTCTCGACAGAGATCTTGCGGACACGATGCAAACCATAACTGCCACACTGGCTTGTGTCCACCGTGCACGGTTATGACGAAGAGATGGTGTCACGGACACCATGAGCAAAGATCCACGATACTTTGTTATCAAGAGGACTTTAGTTGTGGATTACCTTGCGGTAAAGAAATGTCTTGTGGCAGACATAAGTGCATCCAGCCGTGTCACTCCGGACCTTGTCCTTTTCCATGCACTCAACCTTGCACTATAGTTCGCCAAACTTGCGAGCACACTTGCAATCAACCCTGTCACGAGCCGCCTTGTCCGGAAACCCCCTGCAGGCAAACGGTCCGCGTGACCTGCCAATGCGGGCAAAGATCAAGCACCAGATCATGCGTCGAGTTAACCAGCGAGTATCAAAGCATCGCAATGTCCCATCTAGCTTCGAAAATGGCCGATATTCAGAAGGGGCAGGTTGTGGATATCAGCGATATTGTGAGCGGACAGAAGAAACATGGAACACTTAAAACATTGGAATGCAACGAAGATTGCAGACTGCTTGAACGTAACCGCCGGATGGCGATCGCTTTGCAAATCCGTAATCCAGACTTGAGTTCGAAGTTAACTCCACGCTATTCCGACTTCATGAAGTCCTGGGGTAAAAAAGACACGCGCTTCTGCCAACACGTGCACGACAAACTCACCGAGCTTGTGCACCTCGCCAAGCAGAGCAAGCAGAAAAGTCGTTCCTACTCATTTGAGAGCATGAATAAGGACAAGCGTCACTTTGTGCATGAGTACTGCGAGCAGTTTGGTTGTGACAGCGAAGCCTACGACGCAGAGCCCAACCGCAACATCGTTGCAACAGCTTTTCGAGACAAGTCCTGGCTGCCGAGCATCAGCCTTTTGGAATTCCTGCAGCGAGAGAATGGACAGCGCAAGGTCCCTGGCCCGATCTTGGGGAAAAAGAAGCTTCTCAGCCGCCCGGCCAAGCCCCCCACTCCACCCGGAGAATACGTTGATTATTTTGATGATCCACCGGTATGA
- Protein Sequence
- MSYWNPNYIPTPNYQPSGDDSMYTDPGLYTTMFNPYTENGGSYYTTPQFTHNYNQNIPMNFYNSTMPSMESHQRFNSNNNIQGNQANAYGVGASNGYNLRVNSAQVRESKLTPTAEEFRPRNMSYYTTENGASGGAVKKPFSNYGKNKKNQNGNEQQQQWSAGGSSRQNNAERYESQSYYKQKRKGYGNKNNEQNRAPDDASMYAVAVEEKPRDEGEVQGGNNERFYDGYKARGFDRHGKNWNNGKNGGDYSYKKNGGRNKYDKKYEEPHEKRENENWRQNMTVHASNWEDKKDANPQELKKKFDAASQRERLVQMVERRLLECLVCCERLRHSDSIWSCKQCYHIIHLNCVIRWAKTSKLETGWRCPACQNVYSNIPNEYRCYCDKTLQPRLELGTLPHSCGEVCGRKGRSCEHTCTLLCHPGPCPECTILTPRACGCGSTKPTVKCSSDVPIICQNVCGKVLECGLHNCASNCHVGKCGDCKEVLKQECYCGKVGRKVPCTSETKGNLRYDCGEVCGKLLPCGNHHCEALCHPGECSPCRTSPSVITTCPCGQMKLTSERKSCTDSIPCCDKVCNKILKCGQPSAPHQCQKRCHKGKCPRCPLTTLVRCRCGHMDKEIACRELKTKADDARCQKKCVKLRLCYKHKCNQMCCIEVEHVCPLPCNRMLSCGLHRCEETCHRALCPPCWRTSFQELYCECGASVLYPPVACGTRPPPCNKPCSRQRSCGHDANHNCHTGLCPPCTVMTKRWCHGHHEQRSTILCYQEDFSCGLPCGKEMSCGRHKCIQPCHSGPCPFPCTQPCTIVRQTCEHTCNQPCHEPPCPETPCRQTVRVTCQCGQRSSTRSCVELTSEYQSIAMSHLASKMADIQKGQVVDISDIVSGQKKHGTLKTLECNEDCRLLERNRRMAIALQIRNPDLSSKLTPRYSDFMKSWGKKDTRFCQHVHDKLTELVHLAKQSKQKSRSYSFESMNKDKRHFVHEYCEQFGCDSEAYDAEPNRNIVATAFRDKSWLPSISLLEFLQRENGQRKVPGPILGKKKLLSRPAKPPTPPGEYVDYFDDPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00465657; iTF_00467153;
- 90% Identity
- -
- 80% Identity
- -