Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49431339-49441315[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.0062 3.7 8.7 0.2 21 46 42 67 39 73 0.86

2 30 0.11 63 4.8 0.1 21 48 70 96 67 102 0.88

3 30 6.8 4e+03 -1.0 0.1 22 48 99 124 93 130 0.82

4 30 1.8 1.1e+03 0.8 0.1 21 45 155 179 151 186 0.84

5 30 2.4 1.4e+03 0.4 0.1 22 48 184 209 178 215 0.82

6 30 1.6 9.7e+02 1.0 0.7 20 43 210 233 204 238 0.81

7 30 0.01 6.2 8.0 0.6 21 48 239 265 234 269 0.87

8 30 0.022 13 6.9 0.0 21 50 284 312 280 315 0.88

9 30 0.28 1.7e+02 3.4 0.7 20 43 311 334 307 341 0.86

10 30 0.18 1.1e+02 4.0 0.1 20 43 339 362 335 368 0.82

11 30 0.31 1.9e+02 3.2 0.1 16 43 363 390 359 399 0.84

12 30 0.4 2.4e+02 2.9 1.4 16 46 403 433 388 439 0.69

13 30 0.18 1.1e+02 4.0 0.0 21 48 436 462 433 467 0.86

14 30 0.33 2e+02 3.2 0.1 22 47 465 489 459 496 0.84

15 30 0.7 4.2e+02 2.1 0.0 16 43 487 514 481 519 0.85

16 30 0.0089 5.3 8.2 0.1 21 44 520 543 512 551 0.87

17 30 1.8 1.1e+03 0.8 0.0 22 49 549 575 544 579 0.87

18 30 0.073 43 5.3 0.1 18 48 573 602 567 607 0.85

19 30 0.44 2.6e+02 2.8 0.1 22 49 605 631 599 635 0.87

20 30 0.15 90 4.3 0.4 22 48 633 658 629 661 0.85

21 30 0.29 1.7e+02 3.4 0.0 21 49 660 687 655 692 0.88

22 30 0.044 26 6.0 0.0 21 43 699 721 688 730 0.84

23 30 1.7 1e+03 0.9 0.0 21 48 727 753 724 756 0.89

24 30 0.061 36 5.5 0.4 18 48 752 781 746 786 0.85

25 30 0.17 99 4.1 0.2 21 49 783 810 778 814 0.85

26 30 0.43 2.5e+02 2.8 1.1 9 43 799 833 793 839 0.75

27 30 0.36 2.1e+02 3.1 0.4 11 48 829 865 823 870 0.80

28 30 0.47 2.8e+02 2.7 0.1 21 48 867 893 862 898 0.85

29 30 0.53 3.1e+02 2.5 0.0 21 48 895 921 890 923 0.90

30 30 0.0049 2.9 9.0 0.1 18 44 920 946 910 954 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.0062	3.7	8.7	0.2	21	46	42	67	39	73	0.86
2	30	0.11	63	4.8	0.1	21	48	70	96	67	102	0.88
3	30	6.8	4e+03	-1.0	0.1	22	48	99	124	93	130	0.82
4	30	1.8	1.1e+03	0.8	0.1	21	45	155	179	151	186	0.84
5	30	2.4	1.4e+03	0.4	0.1	22	48	184	209	178	215	0.82
6	30	1.6	9.7e+02	1.0	0.7	20	43	210	233	204	238	0.81
7	30	0.01	6.2	8.0	0.6	21	48	239	265	234	269	0.87
8	30	0.022	13	6.9	0.0	21	50	284	312	280	315	0.88
9	30	0.28	1.7e+02	3.4	0.7	20	43	311	334	307	341	0.86
10	30	0.18	1.1e+02	4.0	0.1	20	43	339	362	335	368	0.82
11	30	0.31	1.9e+02	3.2	0.1	16	43	363	390	359	399	0.84
12	30	0.4	2.4e+02	2.9	1.4	16	46	403	433	388	439	0.69
13	30	0.18	1.1e+02	4.0	0.0	21	48	436	462	433	467	0.86
14	30	0.33	2e+02	3.2	0.1	22	47	465	489	459	496	0.84
15	30	0.7	4.2e+02	2.1	0.0	16	43	487	514	481	519	0.85
16	30	0.0089	5.3	8.2	0.1	21	44	520	543	512	551	0.87
17	30	1.8	1.1e+03	0.8	0.0	22	49	549	575	544	579	0.87
18	30	0.073	43	5.3	0.1	18	48	573	602	567	607	0.85
19	30	0.44	2.6e+02	2.8	0.1	22	49	605	631	599	635	0.87
20	30	0.15	90	4.3	0.4	22	48	633	658	629	661	0.85
21	30	0.29	1.7e+02	3.4	0.0	21	49	660	687	655	692	0.88
22	30	0.044	26	6.0	0.0	21	43	699	721	688	730	0.84
23	30	1.7	1e+03	0.9	0.0	21	48	727	753	724	756	0.89
24	30	0.061	36	5.5	0.4	18	48	752	781	746	786	0.85
25	30	0.17	99	4.1	0.2	21	49	783	810	778	814	0.85
26	30	0.43	2.5e+02	2.8	1.1	9	43	799	833	793	839	0.75
27	30	0.36	2.1e+02	3.1	0.4	11	48	829	865	823	870	0.80
28	30	0.47	2.8e+02	2.7	0.1	21	48	867	893	862	898	0.85
29	30	0.53	3.1e+02	2.5	0.0	21	48	895	921	890	923	0.90
30	30	0.0049	2.9	9.0	0.1	18	44	920	946	910	954	0.84

Sequence Information

Coding Sequence: ATGACCGGCGGGAAGACTTTCGGGGATAGAACCCGAGCCTCTTGGTATCGCGCCGTACGTTCTAACTGTTCTAACGCTTGGCGCGAAGCCGAGAGACTCAGgtatCAATGGATCCCCCCTAAAGTCGAAAAACCGTTCGCATGCCAAATCTGCGATTCTAAATTTAGATCGCGCGCGTATCTACGCAGACATATCTTGATACACACCGAcgaaaagccgttcagctgcgacctctgcgattacaaatgccgtcAGCTCGGAAACCTCCAGCAGCACAAGTTAAAACACGCCGACGAGAAGACGATCAgttgcgatctctgcgattacagATGCCGAAGCGTAAAATCtctgaaacagcacgtgctgaagcacaccgacgagaagccgttcagctgcgacctctgcgattacaagtgcggACTCCACGGACACTTGAGCCGGCACATGTTGAAGCACGCCGCCGACGAGAAGCCGCTCAGCTGCGGCGTTTGCGGTTACGAATGCCGGCGACCCGAATACCTGAAGCAACACATGTCCACGCACATCGACGATAAGCCGTACAACTGCGACCTTTGCGGCTATAAATTCCGTCGGCTCGCGCATCTCAAACGCCACCAGTTGCAACACACCTCCGAGAAACCGCTCGCGTGCGACCTTTGCAGTTACAAATGCCGACGAATCGAGCACTTGAAAGTACACAAGTTacagcacaccgacgagaagccgctcAGCTGTGACGTGTgcaattataaatgccgacagctcATAAGTCTGAGACGGCACAAGTTAAAACACACCGACGCGAAACTGCAGTTACCGGCGGCGATTAACATGTTAACCATGCAAACAGGCGAGAAGCCCTTCAGCTGTGACGTTTGCAGTTTCAAATTCCGTCGGCTCGGAAATCTGAACCGGCATAAGTTGAAACACACAGCGGAGAAGCCGATCAGTTGTgatgtttgcgattataaatgtcggcgAATCGAGCACCTGCGACAGCACCGGTtaaagcacaccgacgagaagccgttcacttGCGACGTCTGCGATTATAAAAGCCGGCGGCTAGTAGATTTGAATCGGCACAGGTTGAAGCACACGGGCGAGAAACCGCTCGGCTGTGacttttgcgattataagtgccgagaTGCGTCGACTCTGAAGCGGCACAGgctaacgcacaccggcgagaagccgttcgaatgCCAATCCGAAACCCTAGACAAAAAAACAACCACTTGCCGGATTTGTAATTCTAAATTCAAATCTCGCGCGCACCTGCGCTGTCACATCCTGATACACACCGACGAAAAGCCGTTCACTTGCGACCTTTGCGGTTACAAATGCCGATACCTCGGCAACCTAAAGcagcacaagttaaagcacaccgaCCACAAGCCGTTGAGctgcgatctctgcgattacaaatgccgcgCAGCCGGAAATCTGAAACAGCACATGTCGAGGCACACGGGCGAAAAGCCGTTCGgttgcgatctctgcgattacaaatgccgacggCTGGAATATCTGAAAAAGCACAAgctaacgcacaccggcgagaagccgttcagttgtaatATCTGCGATTACGCCTGTCGCGAAGCTAAACTTCTGCGAAAGCACATGCTGACCCACACGGGCGAGATGCCGTTCAGTTGCGAGCTCTGCGACTACAAAGGTCGAGACGTCGTATGTTTGAAGCGCCACAAGTTAAGGCACActggcgagaagccgttcgcctgtgatctctgcgattataaatgccggaaATCCGATAGGTTGAAGCAGCACAAGCTGAAACACACCGACGacaagccgttcagttgcgacctttgcgattataaatgccgacactTCGTAAATTTAAAACAGCACGAGTTGAAGCACACCGAtcagaagccgttcggttgtgatctctgcgattataagtgccggcAACTCGTGCATTTGAGACGGCACAAGCtgaaacacaccggcgagaaaccgttcggttgtgaacTTTGTGATTTCAAGTGTCGAGATGTCGGAGGTTTGAAACGGCACAACTTGAGgcacaccggcgaaaaaccGTTTAATTGCTTAACACACACCGGTGAGAAGCCATTCACTTGTGACGTCTGCGATTATGCGTGCCGCGAGGCCAAACTTCTGAAAAAGCACGGGCTAACGCACACGGGCGAAAAGCCGTTCGgctgtgatctctgcgattacaaggGTCGAGATGTCGTATGCCTGAAGCGGCACAAATTaaggcacaccggcgagaagcctttCGCTTGCGATGTCTGCGATTATAGATGCCGAAAATCCGATAGATTAAAACAGCACAAGTTGAAACAcagcgacgagaagccgttcggttgcgagctttgcgattacaagtgccgaaACCCCGGAAATTTGAAACATCACAGGTTaaggcacaccggcgagaagccgttcgcttgcgatctttgcgattacaaatgccgaaaACCCAGCAGACTGAATCAGCACAGGTTGAAGCACACCGGCGAGcggccgttcggttgtgatctttgcgattataaatgccgagcGTCTAATAAGTTGAAACTGCACAAGCTGAAGCACACCGGAGAGAAACCGTTCGGGTGTGATCtatgcgattacaagtgccggcAACTAGTGCAGTTGAGACTGCACAAGTTGAAGCACAccaacgagaaaccgttcagttgtaaGCTTTGCGATTTCGAGTGTCGAGATCTCGGAGGTTTAAAACGGCACAATTTAAGGCACAcaggcgagaagccgttcggttgtgacgtttgcgattacaaatgtcggCAGGCTAATAGTCTGAAACGGCACAAGTtgatacacaccgacgagaagccgctgAGCTCTGGCACAAGTTGA
Protein Sequence: MTGGKTFGDRTRASWYRAVRSNCSNAWREAERLRYQWIPPKVEKPFACQICDSKFRSRAYLRRHILIHTDEKPFSCDLCDYKCRQLGNLQQHKLKHADEKTISCDLCDYRCRSVKSLKQHVLKHTDEKPFSCDLCDYKCGLHGHLSRHMLKHAADEKPLSCGVCGYECRRPEYLKQHMSTHIDDKPYNCDLCGYKFRRLAHLKRHQLQHTSEKPLACDLCSYKCRRIEHLKVHKLQHTDEKPLSCDVCNYKCRQLISLRRHKLKHTDAKLQLPAAINMLTMQTGEKPFSCDVCSFKFRRLGNLNRHKLKHTAEKPISCDVCDYKCRRIEHLRQHRLKHTDEKPFTCDVCDYKSRRLVDLNRHRLKHTGEKPLGCDFCDYKCRDASTLKRHRLTHTGEKPFECQSETLDKKTTTCRICNSKFKSRAHLRCHILIHTDEKPFTCDLCGYKCRYLGNLKQHKLKHTDHKPLSCDLCDYKCRAAGNLKQHMSRHTGEKPFGCDLCDYKCRRLEYLKKHKLTHTGEKPFSCNICDYACREAKLLRKHMLTHTGEMPFSCELCDYKGRDVVCLKRHKLRHTGEKPFACDLCDYKCRKSDRLKQHKLKHTDDKPFSCDLCDYKCRHFVNLKQHELKHTDQKPFGCDLCDYKCRQLVHLRRHKLKHTGEKPFGCELCDFKCRDVGGLKRHNLRHTGEKPFNCLTHTGEKPFTCDVCDYACREAKLLKKHGLTHTGEKPFGCDLCDYKGRDVVCLKRHKLRHTGEKPFACDVCDYRCRKSDRLKQHKLKHSDEKPFGCELCDYKCRNPGNLKHHRLRHTGEKPFACDLCDYKCRKPSRLNQHRLKHTGERPFGCDLCDYKCRASNKLKLHKLKHTGEKPFGCDLCDYKCRQLVQLRLHKLKHTNEKPFSCKLCDFECRDLGGLKRHNLRHTGEKPFGCDVCDYKCRQANSLKRHKLIHTDEKPLSSGTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258337;
90% Identity: iTF_01258337;
80% Identity: iTF_01258337;