Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:45164577-45185520[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 5.7 3.4e+03 -0.8 0.0 23 44 395 416 390 424 0.82

2 21 0.19 1.1e+02 3.9 0.0 21 45 421 445 414 448 0.91

3 21 0.57 3.4e+02 2.4 0.1 22 44 450 472 447 476 0.88

4 21 7.8 4.6e+03 -1.2 0.0 27 46 484 503 482 509 0.80

5 21 0.022 13 6.9 0.1 21 44 506 529 503 532 0.91

6 21 0.09 53 5.0 0.5 21 48 563 590 557 596 0.84

7 21 2.4 1.4e+03 0.4 0.3 23 43 593 613 590 619 0.86

8 21 0.005 3 9.0 0.1 21 44 619 642 612 647 0.89

9 21 0.076 45 5.2 0.0 21 44 647 670 644 675 0.91

10 21 0.36 2.1e+02 3.1 0.4 21 49 675 703 671 707 0.86

11 21 1.5 8.9e+02 1.1 0.1 21 43 731 753 725 758 0.87

12 21 0.021 13 7.0 0.1 25 45 833 853 824 856 0.86

13 21 0.39 2.3e+02 3.0 0.1 22 48 858 883 853 890 0.85

14 21 3.2 1.9e+03 0.0 0.0 22 44 887 909 882 913 0.87

15 21 0.0063 3.7 8.7 0.1 20 46 913 939 900 944 0.86

16 21 0.42 2.5e+02 2.9 0.6 20 48 971 999 963 1004 0.84

17 21 0.0094 5.6 8.1 0.4 21 48 1030 1056 1025 1060 0.90

18 21 0.25 1.5e+02 3.6 0.0 18 47 1055 1084 1053 1091 0.85

19 21 0.74 4.4e+02 2.1 0.0 21 48 1114 1141 1109 1145 0.91

20 21 0.38 2.2e+02 3.0 0.2 21 43 1172 1194 1156 1200 0.86

21 21 0.088 52 5.0 0.0 21 44 1200 1223 1195 1228 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	5.7	3.4e+03	-0.8	0.0	23	44	395	416	390	424	0.82
2	21	0.19	1.1e+02	3.9	0.0	21	45	421	445	414	448	0.91
3	21	0.57	3.4e+02	2.4	0.1	22	44	450	472	447	476	0.88
4	21	7.8	4.6e+03	-1.2	0.0	27	46	484	503	482	509	0.80
5	21	0.022	13	6.9	0.1	21	44	506	529	503	532	0.91
6	21	0.09	53	5.0	0.5	21	48	563	590	557	596	0.84
7	21	2.4	1.4e+03	0.4	0.3	23	43	593	613	590	619	0.86
8	21	0.005	3	9.0	0.1	21	44	619	642	612	647	0.89
9	21	0.076	45	5.2	0.0	21	44	647	670	644	675	0.91
10	21	0.36	2.1e+02	3.1	0.4	21	49	675	703	671	707	0.86
11	21	1.5	8.9e+02	1.1	0.1	21	43	731	753	725	758	0.87
12	21	0.021	13	7.0	0.1	25	45	833	853	824	856	0.86
13	21	0.39	2.3e+02	3.0	0.1	22	48	858	883	853	890	0.85
14	21	3.2	1.9e+03	0.0	0.0	22	44	887	909	882	913	0.87
15	21	0.0063	3.7	8.7	0.1	20	46	913	939	900	944	0.86
16	21	0.42	2.5e+02	2.9	0.6	20	48	971	999	963	1004	0.84
17	21	0.0094	5.6	8.1	0.4	21	48	1030	1056	1025	1060	0.90
18	21	0.25	1.5e+02	3.6	0.0	18	47	1055	1084	1053	1091	0.85
19	21	0.74	4.4e+02	2.1	0.0	21	48	1114	1141	1109	1145	0.91
20	21	0.38	2.2e+02	3.0	0.2	21	43	1172	1194	1156	1200	0.86
21	21	0.088	52	5.0	0.0	21	44	1200	1223	1195	1228	0.90

Sequence Information

Coding Sequence: ATGCGGCCCGTCGCGTTGTTCGTCTTCGTCTTCATTGGTGTGCGCGTCGACGCCAAAATTCACACGGACCTCGCAAACAGGATTATATATCGAGAGGGAAAAtTTTTCGGCATTGGATTGGTTCGGTTCCAAAACGGCGTCTGTCCTTCACAGGATGGTTACGATGGTACTTGCTACACGAAACGACAGTGTTCAGATATCAACGGAAGCGTTTCGGGAACGTGCGCCAGTAACATTGGGGTCTGTTGTGTTGtacAAACAACATGTGGTGGATCTTCGTCTTACAACAACACATACTTTTCGAACCCTGGCTACCCCAGCACTTACTCTGGAGGGATGTCCTGCGTCTTCACCATTGTGCAGTGCAACAGCAACATATGCCAGGTTAGGATAGACCTCTTGAATTTCATTCTCGCCCAGCCCAACGCGAACGGCCAATGCGTCTACGACTCCATGAGTATCGTCGGTGGAGGCGCCAACATTCCGACTCTCTGCGGCGACAACAGTGGGCAGCACTTGTACGTGGATTTCAACGGCAACCAGGACATAAGGATCATCATTTCGACGAGCGCGGACCTCGCCCTGCAGAGGTCGTGGCAGCTCAAAATCAGCCAAATCGCTTGTGATTGTCCAACACTCGcccCCTCTGGTTGTCTGCAATACTACACCACCCCCACCGGCACCGTACGCAGTTTTAACTATGGCAAAACCACCAGCAGCGGCTACATCACTGATGGCCAGCCTGGCACCAGAGAGCTCGCCAACTTGAATTATGGAATATGCGTGGAACCTCTTCCTGGCTACTGCGGAATAACCTGGAGCCCGTCATCGGGTGTCTACGGGGCTTACTCGTTCACCGTTTCCAATAGCACCACCGCAGCCACCGGTGCGGGCACCGTTGGTACACCCGCAGTCGCTTTGAATGGTACCAACTGCACTACCGACTTCATCGTGGTACCAAATCCATCTACCGGGGGAGTACCCACGAACACAGACAGATTCTGCGGAAATTACTTGCCCCCATTGACAAcaTACTCGAAGCCTTTCGTGTTGACCGTGGTGAACAATGGTGATGATAGTACCGATTCGGGGAACAGAGGTTTCTCTATATCGTATTCGGAAGTAAGATGCAATGCCTCGTCTTACGTGTATAAGTGCAAACTTGAAAAGAATACGGACAAAAGTCCGGTCAAATGCAACATATGCGGTTCCAAATTCAAAAGCGTGGAGTCTTTCAAGAAGCACCTgctgacgcacaccggcgagaaaccgttcaaaTGCTTGCTATGCGATCACCGGTCTCACCAATCCGAAGGACTGAAGCGGCACATGaaaacgcacaccgacgagaagtcGCTGACGTGCAACTCCTGCGCATTGAAATTGCAAACCGCCAAAAACTTGGCGCGGCATATGTTAACGCACACCGGCGGCATGAAGTTGTACAGTTGTAACCTTTGCGATTACGAATCCCGGGAACGTGGAAACATGAAGCGGCACATGTTAATACACAgcgatgagaagccgttcaagTGCCCTtcctgcgattataagtgccggcAGGCCTTCAATCTGAAACTGCACATGTCCggacacaccggcgagaaattATACAGTTGTGATCGTTGCGATTTTAAAGCTCAGTACATGGCCGGGTTGAAGATGCATAAGCTGAAACACACCGACGACGAGAGGGAATTTACTTGTCCTGTTTGCGAGTTTAAGTGCAGGGAACGCATAAACCTGAGCCATCACATAATAACAATACACAATCAAATGCCGTTCCATTGTGAcatttgcgattacaaatgtcaGCAGTACGCTCATTTGAGGAAgcacaagttaacgcacaccgacgagaaaccgttgggctgcgacctttgcgattacaagtgtcgACAGAGCACGCACTTGAAGCGGCACATGTTGACACACACCGGAGAGAAACCGTACGGTTGCAAAGTTTGCGAGTTCAAAGCGCGAGATTCCGGGGGCATCAGGCGGCACATGTTGACACACAATAAGGAGAAACCGCTGAAATGCTCTTCCTGCGATTACGAGTGCCGAAACGCCCGGTACCTGAAGCTTCACTTGAGGATACACGCCGACGAGAAACCGCTCAAGTGTTCGTTCTGCGATTACGAATGCGGGAACGCCGCGTATCTGAAGCTCCACTTGAGAACACAcgccgacgagaaaccgttcgcttGTGACCTTTGCGCTCGCAAATTCCGACGCGAGTGCAACTTGACAGCGCACAAGACAATTCACACGGACGAGTGGTTGAATTGTGGCATGTGCGATTATAAAAATCGACGGATTTCATCGTTGAAGCGGCATATGGCGACACACACCGCCGAAAACGACAAGAAatGGCGGAGCGCTTATGAACCTGACTGTCCGTCGACAGTCAACTGCAACATATGCGattctaaatttgaaaatttagagTCCTTCAAGCAACACCTGGCGACACACACCGGCGACGAGAAACTGTTGAAATGTCTGATTTGCGATTACCAAACGCGTCAAGCCAAAAACTTGAGACTGCACATGAacacacacaccgacgagaagtcGCTGACGTGCGACTCTTGCGCTTACAAATTCCGATGTCTTACGAATTTGAAGCGGCACATGCTAACGCACGCAGCCGGCGATAAGCCGTTCAGCTGCGAACTCTGCGATTACGAATCCCGTGTCCCCGGAAACATGAAGCGGCACATGTTGACGCACAACAACGAAAAGCCGTTCAAGTGCCCTtcctgcgattacaaatgccggcaGGCCTTTAACCTGAAACTGCACATGtcgatacacaccggcgagaataTGTACGCTTGCGATCTCTGCGATTTTAAAACGCGATTTATGACCGTCTTGAGACGGCATAGGTTGAAGCACACCGACGAAAGCGAGGGGAAGCTCAGTTGTCATGTTTGCGGGTACAAGTGCGGAGATCGCAGAAATTTGAACCGTCACGTCCGAAGAATACACAATCAAACGCCATATCCGTTCCATTGCGacgtttgcgattacaaatgtcaACAAATCGCTCATTTAAAGCTgcacaagttaacgcacaccgacgaaaaGCCCTTGAGctgcgacctttgcgattacaagtgccggcAGGCCGCACACTTGAAACGCCACAAGTTGCGACACACCGgagagaagccgttcagttgcgaatTTTGCGATTTCAAATCGCGAGACTCCGGGGGGATTAAGCGACACATGTtgatacacaccgacgagaaaccatACAAATGCACtttctgcgattataaatgccgataCGCCGGATATCTCAAGCTCCACGTGacgatacacaccggcgagaagccgttcagctgcgacctttgcgattacaaaactCTCTACAGCAAAGAATTGAAACTGCACGTGTCGTCGAGACACGCCGGCGACGAGAAGCTGTTGAGTTGTGAATTTTGTGATTTCAAGTGTAGACGGCCCCAAAGTATGAAACGGCATgcgttaatacacaccggcgagaaaccatTCAGTTGTAGTATTTGCGCTTACAAAACTCGCCAGCTCGAAAGTTTGAATCACCACAAGCTGATACAtgccgacgagaaaccgttcgcttGCGACATCTGCGGTCAAAAATTCCGGCGAGCCGGCAATCTGAAAATGCACGCGGCAATTCACAAGAACGAGTGGCTAAGTTGTAGCCAGTGCGATTATAAGAGTCGATGGAGTTCAACGTTGAAGCGGCATATGGCGACACACACTGGCGATAAAAAGCCAAAAGTGACACTTTAG
Protein Sequence: MRPVALFVFVFIGVRVDAKIHTDLANRIIYREGKFFGIGLVRFQNGVCPSQDGYDGTCYTKRQCSDINGSVSGTCASNIGVCCVVQTTCGGSSSYNNTYFSNPGYPSTYSGGMSCVFTIVQCNSNICQVRIDLLNFILAQPNANGQCVYDSMSIVGGGANIPTLCGDNSGQHLYVDFNGNQDIRIIISTSADLALQRSWQLKISQIACDCPTLAPSGCLQYYTTPTGTVRSFNYGKTTSSGYITDGQPGTRELANLNYGICVEPLPGYCGITWSPSSGVYGAYSFTVSNSTTAATGAGTVGTPAVALNGTNCTTDFIVVPNPSTGGVPTNTDRFCGNYLPPLTTYSKPFVLTVVNNGDDSTDSGNRGFSISYSEVRCNASSYVYKCKLEKNTDKSPVKCNICGSKFKSVESFKKHLLTHTGEKPFKCLLCDHRSHQSEGLKRHMKTHTDEKSLTCNSCALKLQTAKNLARHMLTHTGGMKLYSCNLCDYESRERGNMKRHMLIHSDEKPFKCPSCDYKCRQAFNLKLHMSGHTGEKLYSCDRCDFKAQYMAGLKMHKLKHTDDEREFTCPVCEFKCRERINLSHHIITIHNQMPFHCDICDYKCQQYAHLRKHKLTHTDEKPLGCDLCDYKCRQSTHLKRHMLTHTGEKPYGCKVCEFKARDSGGIRRHMLTHNKEKPLKCSSCDYECRNARYLKLHLRIHADEKPLKCSFCDYECGNAAYLKLHLRTHADEKPFACDLCARKFRRECNLTAHKTIHTDEWLNCGMCDYKNRRISSLKRHMATHTAENDKKWRSAYEPDCPSTVNCNICDSKFENLESFKQHLATHTGDEKLLKCLICDYQTRQAKNLRLHMNTHTDEKSLTCDSCAYKFRCLTNLKRHMLTHAAGDKPFSCELCDYESRVPGNMKRHMLTHNNEKPFKCPSCDYKCRQAFNLKLHMSIHTGENMYACDLCDFKTRFMTVLRRHRLKHTDESEGKLSCHVCGYKCGDRRNLNRHVRRIHNQTPYPFHCDVCDYKCQQIAHLKLHKLTHTDEKPLSCDLCDYKCRQAAHLKRHKLRHTGEKPFSCEFCDFKSRDSGGIKRHMLIHTDEKPYKCTFCDYKCRYAGYLKLHVTIHTGEKPFSCDLCDYKTLYSKELKLHVSSRHAGDEKLLSCEFCDFKCRRPQSMKRHALIHTGEKPFSCSICAYKTRQLESLNHHKLIHADEKPFACDICGQKFRRAGNLKMHAAIHKNEWLSCSQCDYKSRWSSTLKRHMATHTGDKKPKVTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258322;
90% Identity: iTF_01258322;
80% Identity: iTF_01258322;