Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:46715242-46727078[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.28 1.7e+02 3.4 0.0 20 44 137 161 127 169 0.82

2 21 0.12 70 4.6 0.1 21 44 166 189 163 197 0.86

3 21 2 1.2e+03 0.7 0.1 26 44 200 218 192 222 0.87

4 21 0.016 9.4 7.4 0.2 21 43 223 245 219 252 0.89

5 21 0.077 45 5.2 0.0 21 47 252 278 247 283 0.83

6 21 0.011 6.7 7.9 0.1 22 44 281 303 279 311 0.87

7 21 0.27 1.6e+02 3.5 0.0 21 44 308 331 305 340 0.82

8 21 0.0014 0.8 10.8 0.1 22 48 338 363 333 367 0.87

9 21 5.9 3.5e+03 -0.8 0.2 21 44 365 388 361 393 0.76

10 21 1.7 9.9e+02 0.9 0.1 21 45 393 417 390 424 0.88

11 21 3.7 2.2e+03 -0.2 0.1 26 44 445 463 439 467 0.86

12 21 0.17 98 4.1 0.6 21 49 468 496 465 502 0.90

13 21 6.1 3.6e+03 -0.9 0.0 19 48 522 551 509 555 0.84

14 21 0.073 44 5.3 0.4 21 47 552 577 549 582 0.88

15 21 2.8 1.6e+03 0.2 0.2 17 41 633 657 623 663 0.75

16 21 0.12 69 4.6 0.4 21 44 665 688 662 695 0.89

17 21 2.9 1.7e+03 0.1 0.0 22 48 724 750 719 754 0.81

18 21 0.0016 0.96 10.6 0.0 20 47 750 777 740 784 0.84

19 21 2.5 1.5e+03 0.4 0.0 21 43 779 801 776 806 0.88

20 21 0.0036 2.1 9.5 0.0 21 47 837 863 833 870 0.86

21 21 0.24 1.5e+02 3.6 0.2 21 45 893 917 887 923 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.28	1.7e+02	3.4	0.0	20	44	137	161	127	169	0.82
2	21	0.12	70	4.6	0.1	21	44	166	189	163	197	0.86
3	21	2	1.2e+03	0.7	0.1	26	44	200	218	192	222	0.87
4	21	0.016	9.4	7.4	0.2	21	43	223	245	219	252	0.89
5	21	0.077	45	5.2	0.0	21	47	252	278	247	283	0.83
6	21	0.011	6.7	7.9	0.1	22	44	281	303	279	311	0.87
7	21	0.27	1.6e+02	3.5	0.0	21	44	308	331	305	340	0.82
8	21	0.0014	0.8	10.8	0.1	22	48	338	363	333	367	0.87
9	21	5.9	3.5e+03	-0.8	0.2	21	44	365	388	361	393	0.76
10	21	1.7	9.9e+02	0.9	0.1	21	45	393	417	390	424	0.88
11	21	3.7	2.2e+03	-0.2	0.1	26	44	445	463	439	467	0.86
12	21	0.17	98	4.1	0.6	21	49	468	496	465	502	0.90
13	21	6.1	3.6e+03	-0.9	0.0	19	48	522	551	509	555	0.84
14	21	0.073	44	5.3	0.4	21	47	552	577	549	582	0.88
15	21	2.8	1.6e+03	0.2	0.2	17	41	633	657	623	663	0.75
16	21	0.12	69	4.6	0.4	21	44	665	688	662	695	0.89
17	21	2.9	1.7e+03	0.1	0.0	22	48	724	750	719	754	0.81
18	21	0.0016	0.96	10.6	0.0	20	47	750	777	740	784	0.84
19	21	2.5	1.5e+03	0.4	0.0	21	43	779	801	776	806	0.88
20	21	0.0036	2.1	9.5	0.0	21	47	837	863	833	870	0.86
21	21	0.24	1.5e+02	3.6	0.2	21	45	893	917	887	923	0.84

Sequence Information

Coding Sequence: ATGTTTCAGGTTAGACGAGCCGCGTTGAATCCTGAAACCCTCGAAAAATCATTTGCTTTCATACTCGGCTTACTCAGGGACATCGGAGGAGCAAATGCAACTGACGTAGAAGCCCTTATTTCCGAATCTCAAGGCTCGTCCCAATCCTCTCGACGCAGCAACGTCCTCGAACACCAAACCGAAACTTACTTGAACGCAGAACCTGCCTTGACCGTTCTCGACATCGGTTTTCCCCCCGACAGGGTGAAAAGTGCCATCCGGAAGAAGGTGGAACGAACAGGACTCGGATTCTCGAACAGCGACGACATAATAGAGGCCATTCTGAACGGTTTGCAAGAAGAAACGACCTCCCTCAACGTGATTTACAAGCTaTTTAAAACCGAGGGGGCGAAAGAAAGTCGACCGCACACCGACGAAAAACCATTCGCTTGCGAGCTTTGCGGTTACAAATTCCGGGAATTCGGCAAATTGAAGCGACACATGTTGACGCACAGCGACGAGAAGCCCTTCAGTTGTAACCACTGCGATTTTAAGTGCGCGCAGGACAGGTATCTGAAAAGGCACATGCTGACGCACACCGGCGCCAAGAAACAGCTCCGCTGCAAGCTCTGCGATTACGAGTGTCGAGAATCCGGCAAGTTGAAACGGCACATGTTAACgcataccggcgagaagccgttcacctGTGATACTTGCAACTACAAGTGCCGACAACTCTCGAACTTGAAGCAGCACTCGTTGACGCACGTGAAAACCGAGAAGGTGTTCGCTTGCGACTTCTGCGATTTCAGATGCCGCCAGGCCGGCAATCTGAAAAAGCACATGGCGATACACGGCGGCGACAAGCCGTTCACGTGTAACATTTGCGATTATAGATGTCGAAAAGCCGGTAATCTCAAGCAGCACGTCctaacgcacaccggcgagaagccgttcagctgtaaactctgcgattacaagtgcgtgcaggcgggaaatttgaaaaagcacGCGCTGACGCACACCGAAGGCGCGAAGCCTTTCACTTGCGAGCTCTGCGGTTTCAGATGTCGAGAATCCGGGAACTTGAAGCGGCACATGATgagacacaccggcgagaaacgcTACAAGTGTAACATCTGCGAGTACGAGTGCACGCGAAGCGAACGTTTGCGGGGGCATTTCttgacgcacaccgacgagaggCCTTTCAAGTGCGACCGCTGCGAATATACAACCAGGACGTCCGTTGTATTAAAGCAGCACTTGCTGGTACATTCTGAGGAGAGGCCGTTCAAGTGTGACAAATGCAAatgcgATCGGACTTGTAAACTTGAGGACAAGAGAAAAATCAAGTGCCGCATATGCGACTATAAATTCTCAAGTAAAAGAGATTTAAGAATTCACTTGCTCGTAcataccgacgagaaaccgttccgTTGCGATCTCTGCGACTACAGATGCCGCCAGCGCCAATCGTTGAAACTGCACGTGTCAATAACGCATACCGATGAGAAACCCTTCAAATGCGTCagctgcgattacaaatgcaaaCAAGCCGGATACTTGAAGCTTCACATGTTGACTCACAGCGAGAAGGCGTTCAGTTGTGATGCTTGTGATTTCAAATGTAGAACGGCGGGGAGACTGAAGACGCACATGTTACTACATACAGACGAGAAGCCTcacggttgtgatctttgcgattataagtgccgacaGTTATCGCTCTTAAGACGGCACAGGTTAAAACACACGGACGCCGAAAAATCGTTGAGTTGTGACgtctgcgattacaagtgccggcATCGCACAGACATGAAAAACCACAAGCtaaaacacaccgacgagaagcggTACAGTTGCGCCTACTGCGAATTTAAATGCCGTCACTATACGTCTTGGAAATACCACATGTCGACACACAGCAGCGAGAAGCCCATCTGTTGTGAgttctgcgattacaaatgtaaAGAGCAAGGGAGCTTGAAGTTGCACATGCTggtgcacaccggcgagaaaccgatTAGTTGCGATCTGTGCGATTACAGGTGTCGACAGAAAACAACGCTGAATCGGCACAAGTTAATACACACCGACGCGGAAAAGTCGTTGAGTTGTGACGCTTGCGATTACAGGTGTCGCTATTATATAGATATGAAAAAGCACAAGTTGAAACACACCGAGCCCGAGAAACGCTTCAGCTGCTCCCTCTGCGATTACAAGAGTCGACTGGCCGGAAACTTGAAACAGCACATGTCGGTACACACCGGAGAGAAACCGTTCTCGTGTGCGGTTTGCGATTCGAGATTCCGACAGGTCGACAAGTTGAAGCGACACATGTTAAttcacaccggcgagaagccgtttagttgcgatctttgcgattataagggGCGGGATGCCTCGTTTTTGAAACGACACAAATTGACGCACGCGGGCGGCGGCGAAAAACGGTTCGGTTGTGACcgctgcgattacaaatgtcaCATGCTCGCGCATCTGAAACGGCATgcgttaacacacaccgacgagaagcctttTGCTTGCGCAGTTTGCGACCACAAGTCTCGGACAAGCTCGGATCTGAAGCGTCACCTGCTGgtgcacaccgacgagaagccgttcggttgtgatcagTGCGATTTCAAGGGTCGAACGAACGGGAACTTGATCGCGCACAAGcagacgcacaccgacgagaaaccgttcacgTGCGCCGTTTGCGGCCGTCAATTTCGGCGGCCCGCGAAGTTGAAACTGCACATGGTGATACACACCAGGGCGAGGTTCAAGTGTGATCAGTGTCGTTACGAAGGTCGAACCGCGGGACATTTGAAAATCCACTTGAAAAGCCATAAGGATAAAACTTAA
Protein Sequence: MFQVRRAALNPETLEKSFAFILGLLRDIGGANATDVEALISESQGSSQSSRRSNVLEHQTETYLNAEPALTVLDIGFPPDRVKSAIRKKVERTGLGFSNSDDIIEAILNGLQEETTSLNVIYKLFKTEGAKESRPHTDEKPFACELCGYKFREFGKLKRHMLTHSDEKPFSCNHCDFKCAQDRYLKRHMLTHTGAKKQLRCKLCDYECRESGKLKRHMLTHTGEKPFTCDTCNYKCRQLSNLKQHSLTHVKTEKVFACDFCDFRCRQAGNLKKHMAIHGGDKPFTCNICDYRCRKAGNLKQHVLTHTGEKPFSCKLCDYKCVQAGNLKKHALTHTEGAKPFTCELCGFRCRESGNLKRHMMRHTGEKRYKCNICEYECTRSERLRGHFLTHTDERPFKCDRCEYTTRTSVVLKQHLLVHSEERPFKCDKCKCDRTCKLEDKRKIKCRICDYKFSSKRDLRIHLLVHTDEKPFRCDLCDYRCRQRQSLKLHVSITHTDEKPFKCVSCDYKCKQAGYLKLHMLTHSEKAFSCDACDFKCRTAGRLKTHMLLHTDEKPHGCDLCDYKCRQLSLLRRHRLKHTDAEKSLSCDVCDYKCRHRTDMKNHKLKHTDEKRYSCAYCEFKCRHYTSWKYHMSTHSSEKPICCEFCDYKCKEQGSLKLHMLVHTGEKPISCDLCDYRCRQKTTLNRHKLIHTDAEKSLSCDACDYRCRYYIDMKKHKLKHTEPEKRFSCSLCDYKSRLAGNLKQHMSVHTGEKPFSCAVCDSRFRQVDKLKRHMLIHTGEKPFSCDLCDYKGRDASFLKRHKLTHAGGGEKRFGCDRCDYKCHMLAHLKRHALTHTDEKPFACAVCDHKSRTSSDLKRHLLVHTDEKPFGCDQCDFKGRTNGNLIAHKQTHTDEKPFTCAVCGRQFRRPAKLKLHMVIHTRARFKCDQCRYEGRTAGHLKIHLKSHKDKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258300;
90% Identity: iTF_01258300;
80% Identity: iTF_01258300;