Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: ZNF296
Assembly: GCA_036172665.1
Location: CM069876.1:45160355-45164044[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.64 3.8e+02 2.3 0.7 24 44 2 22 1 26 0.90

2 12 0.008 4.7 8.4 0.0 21 43 27 49 24 55 0.90

3 12 0.1 60 4.8 0.8 22 44 56 78 50 87 0.85

4 12 0.33 1.9e+02 3.2 0.0 22 48 115 140 111 144 0.84

5 12 7e-05 0.042 14.9 0.1 21 47 197 223 185 231 0.87

6 12 0.03 18 6.5 0.2 21 47 281 307 278 313 0.86

7 12 5.1 3.1e+03 -0.6 0.0 21 43 309 331 307 339 0.79

8 12 0.39 2.3e+02 2.9 0.2 21 34 341 354 334 365 0.82

9 12 0.0072 4.2 8.5 0.1 21 51 368 397 362 400 0.89

10 12 0.0032 1.9 9.6 0.1 21 50 452 481 448 483 0.87

11 12 0.33 2e+02 3.2 0.1 21 50 480 508 478 510 0.87

12 12 0.16 94 4.2 0.5 21 45 539 563 517 566 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.64	3.8e+02	2.3	0.7	24	44	2	22	1	26	0.90
2	12	0.008	4.7	8.4	0.0	21	43	27	49	24	55	0.90
3	12	0.1	60	4.8	0.8	22	44	56	78	50	87	0.85
4	12	0.33	1.9e+02	3.2	0.0	22	48	115	140	111	144	0.84
5	12	7e-05	0.042	14.9	0.1	21	47	197	223	185	231	0.87
6	12	0.03	18	6.5	0.2	21	47	281	307	278	313	0.86
7	12	5.1	3.1e+03	-0.6	0.0	21	43	309	331	307	339	0.79
8	12	0.39	2.3e+02	2.9	0.2	21	34	341	354	334	365	0.82
9	12	0.0072	4.2	8.5	0.1	21	51	368	397	362	400	0.89
10	12	0.0032	1.9	9.6	0.1	21	50	452	481	448	483	0.87
11	12	0.33	2e+02	3.2	0.1	21	50	480	508	478	510	0.87
12	12	0.16	94	4.2	0.5	21	45	539	563	517	566	0.92

Sequence Information

Coding Sequence: ATGCCTTTCAGCTGCGAGCTCTGCAACTACGAGTGTCGTCGATCCGGATGTCTAAAACGGCACATgttgacgcacaccggcgagaaaccgttcggctgCGATCTGTGCGACTTCAAGTGTCGAGCTAGTTCAAATCTAAAGCGGCACAGgctgacgcacaccgacgaCAGGCCCGTGAGTTGTGCGCTTTGCAGTTACAAGTGCCGGCAGTACATAAATTTGAAGCCGCACATgctgacgcacaccgacgagaagcccttTCGTTGTCAGTTTTGCGATTACCGgTCGAGCGAGCGGGATTCCAAAGAATCTTTAAAAAGTTACTTCGTCACGCATACCGGCGAGAAACGGTTCACttgcgatctctgcgattacgAATGCCGACAGGCCGCGCATTTAAAAGGGCACATGTTAAAGCACGCCGAGAAGACCTTGAGCTGCGACgcctgcgattacaaatgtcgaCACGCCTCGAGTATGAAGCTGCACCAATCGAaacataccggcgagaagcgCTTCAGTTGCGACCTCTGCGACTACAAGTGCTTTCTAGTGGGGCAACTGAAGCGGCACGTGTTGACACACAGCGACGAGAAGCCCTTCACATGCGGAATCTGCGACGGTAAATTCAGGCAGCGCACGCACTTGAAACGTCACATGACGATCCACGTCGACCGGAAGCCGCTCGGctgcgacctttgcgattacaagaaCTGGAACGTGTCGAATATGAAGCGGCACAGGTTAACGGCGCACAAGGACCGGCGGTTTAGTTGCGACGTTTGCGATTTCTCGTGCCTGCGAATTGACAATTTGAAAACGCACAAgttgatacacaccggcgagaagccggtGTGTTGCGGCGTTTGCGAGCGCAAGTTCAGACTGATCGGGCACTTGAGGCGTCACATGTTGATACAcacgggcgagaagccgttcagttgcgatctctgcgattacaaggGCCGAGACATCTCGAGTTTTAAGCGACACAAGTTGACGCATTCCGCCGAGAGGCGGTTCGAACAGAATTCTAAATGCCCCGTATGCGATTCAACAATtgcaacaaattatttaaagttacaCATGCTgtcacacaccggcgagaaaccatTCACTTGTGACATTTGCGGTTACAAATGCCGGCTGGAGTCGATTTTGAAGAGGCACGTGCTGACTCACGCCGCCAAAAAGACGTTGAGCTGCGActtctgcgattacaaatgtcaAGACTCCTCCTACATGTCGCTGCACAGGTTAAAACACGCCGACCAGAAGCCGCTCAGGTGCGTCGTTTGCGAATACAAGTGCTTCGACGCGTCGTGCTTGAAGCTGCACATGGcgatacacaccgacgagaagccgttcgcctGCGAAATCTGCGATAATAAATTCAGGCGAGTCGCGCAATTGAAACGCCACATGaaaatacacaccggcgagaaaccgtacgcttgcgatctttgcgattataaattccGAGAGAGGGCGGGATTGAATCGACACAAGGCGACGCACTTCGCCGACGTCATCGGGAAGCGGTTtgcttgcgatctttgcgattaccaAGGCAGCCAGCTGATGTATTTGAAACGGCACATGGCGATTCACACCGGCGAAAAACCGTACAGTTGCGATtattgcgattacaagtgtcgAGAACATCGAAGCTTCAAGCGGCACGTGTCAAGACACCCGGAGAGTTGCCAAGCTGAGACGTTTGCGATTACAAACGTCGACGTTCCTACGGTATAA
Protein Sequence: MPFSCELCNYECRRSGCLKRHMLTHTGEKPFGCDLCDFKCRASSNLKRHRLTHTDDRPVSCALCSYKCRQYINLKPHMLTHTDEKPFRCQFCDYRSSERDSKESLKSYFVTHTGEKRFTCDLCDYECRQAAHLKGHMLKHAEKTLSCDACDYKCRHASSMKLHQSKHTGEKRFSCDLCDYKCFLVGQLKRHVLTHSDEKPFTCGICDGKFRQRTHLKRHMTIHVDRKPLGCDLCDYKNWNVSNMKRHRLTAHKDRRFSCDVCDFSCLRIDNLKTHKLIHTGEKPVCCGVCERKFRLIGHLRRHMLIHTGEKPFSCDLCDYKGRDISSFKRHKLTHSAERRFEQNSKCPVCDSTIATNYLKLHMLSHTGEKPFTCDICGYKCRLESILKRHVLTHAAKKTLSCDFCDYKCQDSSYMSLHRLKHADQKPLRCVVCEYKCFDASCLKLHMAIHTDEKPFACEICDNKFRRVAQLKRHMKIHTGEKPYACDLCDYKFRERAGLNRHKATHFADVIGKRFACDLCDYQGSQLMYLKRHMAIHTGEKPYSCDYCDYKCREHRSFKRHVSRHPESCQAETFAITNVDVPTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258456;
90% Identity: iTF_01258456;
80% Identity: iTF_01258456;