Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49627522-49636561[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 1.6 9.3e+02 1.0 0.2 21 44 42 65 36 70 0.89

2 25 0.0021 1.3 10.2 0.1 21 52 70 101 67 103 0.92

3 25 0.024 14 6.8 0.0 21 44 126 149 115 158 0.87

4 25 1.7 1e+03 0.9 0.1 21 43 154 176 151 181 0.87

5 25 0.0018 1.1 10.4 0.4 14 44 175 205 166 213 0.83

6 25 0.58 3.4e+02 2.4 0.4 21 43 210 232 207 237 0.90

7 25 0.88 5.2e+02 1.8 1.7 14 43 231 260 222 265 0.80

8 25 0.034 20 6.3 0.0 16 43 261 288 256 292 0.87

9 25 0.0095 5.6 8.1 0.1 15 47 293 325 290 332 0.86

10 25 1.7 9.9e+02 0.9 0.1 21 48 327 353 325 356 0.84

11 25 0.042 25 6.1 0.2 21 44 355 378 350 388 0.88

12 25 0.021 12 7.0 0.3 18 48 408 437 403 442 0.86

13 25 1.2 6.9e+02 1.4 0.1 21 44 439 462 436 470 0.80

14 25 0.22 1.3e+02 3.7 0.3 21 44 467 490 454 498 0.85

15 25 2.1 1.2e+03 0.6 4.5 8 43 482 517 480 523 0.79

16 25 0.0015 0.86 10.7 3.6 11 44 513 546 507 555 0.81

17 25 0.19 1.1e+02 4.0 0.2 26 47 605 626 598 633 0.81

18 25 1.6 9.5e+02 1.0 0.9 21 44 628 651 625 655 0.86

19 25 0.11 68 4.7 0.2 17 44 652 679 648 688 0.83

20 25 0.42 2.5e+02 2.8 0.3 15 43 706 734 699 743 0.83

21 25 0.0046 2.7 9.1 0.1 21 48 768 794 760 799 0.90

22 25 6.4 3.8e+03 -0.9 0.1 20 36 795 811 793 824 0.70

23 25 2.7 1.6e+03 0.2 0.0 21 44 852 875 844 883 0.85

24 25 0.19 1.1e+02 3.9 0.1 21 43 880 902 877 907 0.90

25 25 1e-05 0.006 17.6 2.0 5 49 892 935 890 938 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	1.6	9.3e+02	1.0	0.2	21	44	42	65	36	70	0.89
2	25	0.0021	1.3	10.2	0.1	21	52	70	101	67	103	0.92
3	25	0.024	14	6.8	0.0	21	44	126	149	115	158	0.87
4	25	1.7	1e+03	0.9	0.1	21	43	154	176	151	181	0.87
5	25	0.0018	1.1	10.4	0.4	14	44	175	205	166	213	0.83
6	25	0.58	3.4e+02	2.4	0.4	21	43	210	232	207	237	0.90
7	25	0.88	5.2e+02	1.8	1.7	14	43	231	260	222	265	0.80
8	25	0.034	20	6.3	0.0	16	43	261	288	256	292	0.87
9	25	0.0095	5.6	8.1	0.1	15	47	293	325	290	332	0.86
10	25	1.7	9.9e+02	0.9	0.1	21	48	327	353	325	356	0.84
11	25	0.042	25	6.1	0.2	21	44	355	378	350	388	0.88
12	25	0.021	12	7.0	0.3	18	48	408	437	403	442	0.86
13	25	1.2	6.9e+02	1.4	0.1	21	44	439	462	436	470	0.80
14	25	0.22	1.3e+02	3.7	0.3	21	44	467	490	454	498	0.85
15	25	2.1	1.2e+03	0.6	4.5	8	43	482	517	480	523	0.79
16	25	0.0015	0.86	10.7	3.6	11	44	513	546	507	555	0.81
17	25	0.19	1.1e+02	4.0	0.2	26	47	605	626	598	633	0.81
18	25	1.6	9.5e+02	1.0	0.9	21	44	628	651	625	655	0.86
19	25	0.11	68	4.7	0.2	17	44	652	679	648	688	0.83
20	25	0.42	2.5e+02	2.8	0.3	15	43	706	734	699	743	0.83
21	25	0.0046	2.7	9.1	0.1	21	48	768	794	760	799	0.90
22	25	6.4	3.8e+03	-0.9	0.1	20	36	795	811	793	824	0.70
23	25	2.7	1.6e+03	0.2	0.0	21	44	852	875	844	883	0.85
24	25	0.19	1.1e+02	3.9	0.1	21	43	880	902	877	907	0.90
25	25	1e-05	0.006	17.6	2.0	5	49	892	935	890	938	0.86

Sequence Information

Coding Sequence: atGATTATACAGCGTGTATTTTATTTCAGATGCCAACGGACTTCTCAAACTAACACCGCGGACGATAGAACGCGCGACTGTGGCACTAAATTTAAAACGCATGAGCACTCGTTGACATATACCGACGAGAAACCATTCAGATGCGTCGTgtgcgattttaaatgtcgaCTGCCCAGCCGTCTGAAAAGGCACATGCTGATACACACGGGCGAAAAGCCATTCAGCTGCGATCTTTGCTCGTACAAGTGCCGAGGgtccggaaatttgaaacggcacaGGGTGATACACACCGACGCGAAGCCCTACGCCTGCGAACtatgcgattacaagtgccaaTTCGCCGGAAACTTGAAATCGCACATGTTAACGCACAGCGACGAAAAGCCGTTCGCCTGCGACCTCTGCGATTTTAAGTGCCGGCAGGCCGGAAACCTGAAACCGCATATGCTGACGCACACGGGCGAGAAGCCATTCACTTGCGATCACTGCGGCTTTAAATGCCGACAGATCGGAACCATGAAGAAACACAGGCTGACGCACACGGACGAAAAGCCTTTCGCTTGCGAGCTATGCGATTGCAAATTCCGACAGTCCGTGAGCTTGAACAGGCATAGATTGATACACTCCGGGGAGAAGCCCTTCGCTTGCGATCTTTGTGACTGTAAATTCCGACACGCTTGCACTTTAAACAGACATAGATTGACACACTCCGGGGAAAAGCCTTTCACTTGCGAAcattgcgattataaatgccgacaggcCGCAAGCATGGCGAAACATCGATTGACGCACACGGACGAAAAGCCTTTCGCTTGCGACCTCTGCGATTCTAAATTCCGACAAGCGGTGACCTTGTACAGACACAGGTTGCAGATTCCGAAAGCTCAAAACGCGAGCGAAAAAACACTCGAGTGCGGAATATGCGGCGCTAAACACAGATCGCGTGCGAGTTTCCGCAAGCATCTCCTcgtacacaccggcgagaagcctttCAGCTGTGATCTATGCGATTATCAGTGCCGACACGTCGGCCATTTGAATCGCCATAAGCTAACGCACACCGCCGAAAACCCCTTCagttgtgacctctgcgattacaaatgccggcaATTCAAACAGCTGAGGCAGCACAAGTCGGAGCACACACGCGAGAAGCCGTTCTTCTGcggcctttgcgattataaattccAAGCCGTCGGACACCTGAAAGCCCACATGTTGAGGCAcacgggcgagaagccgttcagttgcgacatctgcgattataagtgccgccAACTCGGATGTTTGAGGCAGCACAAGTtgaagcacaccgacgagaagccgttcacctgcgacctttgcgattataagtgccgacaTGTCGGAACCTTGAAGGCGCACGCGTTAATGCACgcgggcgagaagccgttcggctgcgatctctgcgattataagtgtaGACACCCGTCGCATTTAAGACGGCACAAGTTAACACActccgacgagaagccgttcgcttgtgatctttgcgattacaaatgccgacacGCCTCGCATTTAAAACGGCACAGGCTGAAACACTCCGACGAAAAACCGTTCAGCTGTgagctttgcgattataaatgccggcagGTAAGAAACTTGAGAGAGCACAAGCTGACGCACGCTGaagagaagccgttcagttgcgatctttgcgaATGTCAACAGACTTCTTCtcaatctggcaacactgcgaACGAGAGGACATATCACGAATATTCTGCAAAcgcttttaaatttgaaactcgAGGAGAGCACGCGCTGACACCTACCAACGAGAAGCTACTCAGATGCGTCGTCTGCGACTACAAATGCCGCATGTCCAAGGATTTGAAAAGGCACGTGCtcatacacaccgacgagaagccgtttcACTGCACGATTTGCAATTACAAATGCAGACTTAAAAGCCACCTGAAGCAACACATGTGCAGACATAgggacgagaagccgttcagttgcgacgtttgcgattacaaatgcctgGAGAAGACGAACTTGAACCGGCACGTGCTGACGCACAcaggcgagaaaccgttcagctgcgatctttgcgattacaaatgcggTCGAGCGGAAAGTTTGAAACAGCACAGGCTgaggcacaccggcgagaagccttttgcctgcgatctttgcgattacaaatgtcgaGAGAGGAGATATTTCAAActgcacaagttaaagcacgcCGATGATAAGCCGTTTTCGTGTGAGACCTGCGATTTTAAGTGCCTGTACAAACAGACTTTGGAGCGGCACGCTttgacgcacaccggcgagaaaccattcgcttgtgatctttgcgattataaatgcagaCGCTCCGGCAATTTGAAGCAGCACATGCTAAGGCACACTGGCGAGCTGCCTTTCACGTGCGACCTCTGCGAGTACAAGTGCCGCGGTAGGAAGTCCTGGAAGCTGCATAAGCTAAAGCACACCGGCGATAAACCGTATTGCTGTAAGAGCTGCAATTTTAAGTGTCTGTACAAGCAAGCGTTGGAACGGCACGTGTTGACGCACTCGGGCGAGAAACCGTacagttgcgatctttgcgattacaaaagcAGACGGGTCGAAAGTCTGAAGCAGCACGTCTTAACgcataccggcgagaaacctTTCGCTTGCGATCTTTGCGCTTATAAATGTCGACATGCGGGAAACTTAAAGAAACACAGATTGACGCACACTGACGAGAAGCCGTTTACTTGCGATATTTGCGATTATAGATGCCGACAGGCCGTAAACTTGAGGAAACACGAATTGACCCATCGACAGAAAGTTGTTTAA
Protein Sequence: MIIQRVFYFRCQRTSQTNTADDRTRDCGTKFKTHEHSLTYTDEKPFRCVVCDFKCRLPSRLKRHMLIHTGEKPFSCDLCSYKCRGSGNLKRHRVIHTDAKPYACELCDYKCQFAGNLKSHMLTHSDEKPFACDLCDFKCRQAGNLKPHMLTHTGEKPFTCDHCGFKCRQIGTMKKHRLTHTDEKPFACELCDCKFRQSVSLNRHRLIHSGEKPFACDLCDCKFRHACTLNRHRLTHSGEKPFTCEHCDYKCRQAASMAKHRLTHTDEKPFACDLCDSKFRQAVTLYRHRLQIPKAQNASEKTLECGICGAKHRSRASFRKHLLVHTGEKPFSCDLCDYQCRHVGHLNRHKLTHTAENPFSCDLCDYKCRQFKQLRQHKSEHTREKPFFCGLCDYKFQAVGHLKAHMLRHTGEKPFSCDICDYKCRQLGCLRQHKLKHTDEKPFTCDLCDYKCRHVGTLKAHALMHAGEKPFGCDLCDYKCRHPSHLRRHKLTHSDEKPFACDLCDYKCRHASHLKRHRLKHSDEKPFSCELCDYKCRQVRNLREHKLTHAEEKPFSCDLCECQQTSSQSGNTANERTYHEYSANAFKFETRGEHALTPTNEKLLRCVVCDYKCRMSKDLKRHVLIHTDEKPFHCTICNYKCRLKSHLKQHMCRHRDEKPFSCDVCDYKCLEKTNLNRHVLTHTGEKPFSCDLCDYKCGRAESLKQHRLRHTGEKPFACDLCDYKCRERRYFKLHKLKHADDKPFSCETCDFKCLYKQTLERHALTHTGEKPFACDLCDYKCRRSGNLKQHMLRHTGELPFTCDLCEYKCRGRKSWKLHKLKHTGDKPYCCKSCNFKCLYKQALERHVLTHSGEKPYSCDLCDYKSRRVESLKQHVLTHTGEKPFACDLCAYKCRHAGNLKKHRLTHTDEKPFTCDICDYRCRQAVNLRKHELTHRQKVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258365;
90% Identity: iTF_01258365;
80% Identity: iTF_01258365;