Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49447236-49452421[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 6 3.8e+02 2.8 4.0 1 23 15 37 15 37 0.94

2 21 0.01 0.63 11.6 0.8 1 23 43 65 43 65 0.96

3 21 0.21 13 7.4 3.5 1 23 71 93 71 93 0.97

4 21 0.27 17 7.0 1.1 1 23 98 120 98 120 0.97

5 21 1.7 1.1e+02 4.5 6.8 1 23 126 148 126 148 0.97

6 21 0.00056 0.035 15.5 2.7 1 23 154 176 154 176 0.97

7 21 0.0099 0.62 11.6 3.4 1 21 182 202 182 203 0.96

8 21 0.0014 0.089 14.2 0.4 1 23 213 235 213 235 0.97

9 21 0.011 0.68 11.5 4.1 3 23 243 263 241 263 0.96

10 21 0.00066 0.041 15.3 1.2 1 23 269 291 269 291 0.98

11 21 0.0047 0.29 12.6 2.1 3 23 299 319 297 319 0.97

12 21 3.7e-05 0.0023 19.2 1.6 1 23 347 369 347 369 0.98

13 21 0.0063 0.4 12.2 5.2 1 23 375 397 375 397 0.98

14 21 0.0057 0.36 12.3 3.7 3 23 405 425 405 425 0.99

15 21 5.1e-05 0.0032 18.8 1.9 1 23 431 453 431 453 0.97

16 21 5.9e-05 0.0037 18.6 1.6 1 23 459 481 459 481 0.98

17 21 0.00021 0.013 16.8 0.2 1 23 487 509 487 509 0.97

18 21 0.0012 0.078 14.4 2.5 1 23 515 537 515 537 0.97

19 21 0.00078 0.049 15.1 1.0 3 23 545 565 543 565 0.97

20 21 0.0019 0.12 13.8 2.4 3 23 573 593 571 593 0.98

21 21 0.027 1.7 10.2 5.2 3 23 601 621 599 621 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	6	3.8e+02	2.8	4.0	1	23	15	37	15	37	0.94
2	21	0.01	0.63	11.6	0.8	1	23	43	65	43	65	0.96
3	21	0.21	13	7.4	3.5	1	23	71	93	71	93	0.97
4	21	0.27	17	7.0	1.1	1	23	98	120	98	120	0.97
5	21	1.7	1.1e+02	4.5	6.8	1	23	126	148	126	148	0.97
6	21	0.00056	0.035	15.5	2.7	1	23	154	176	154	176	0.97
7	21	0.0099	0.62	11.6	3.4	1	21	182	202	182	203	0.96
8	21	0.0014	0.089	14.2	0.4	1	23	213	235	213	235	0.97
9	21	0.011	0.68	11.5	4.1	3	23	243	263	241	263	0.96
10	21	0.00066	0.041	15.3	1.2	1	23	269	291	269	291	0.98
11	21	0.0047	0.29	12.6	2.1	3	23	299	319	297	319	0.97
12	21	3.7e-05	0.0023	19.2	1.6	1	23	347	369	347	369	0.98
13	21	0.0063	0.4	12.2	5.2	1	23	375	397	375	397	0.98
14	21	0.0057	0.36	12.3	3.7	3	23	405	425	405	425	0.99
15	21	5.1e-05	0.0032	18.8	1.9	1	23	431	453	431	453	0.97
16	21	5.9e-05	0.0037	18.6	1.6	1	23	459	481	459	481	0.98
17	21	0.00021	0.013	16.8	0.2	1	23	487	509	487	509	0.97
18	21	0.0012	0.078	14.4	2.5	1	23	515	537	515	537	0.97
19	21	0.00078	0.049	15.1	1.0	3	23	545	565	543	565	0.97
20	21	0.0019	0.12	13.8	2.4	3	23	573	593	571	593	0.98
21	21	0.027	1.7	10.2	5.2	3	23	601	621	599	621	0.97

Sequence Information

Coding Sequence: ATGTCGGACCGCAAATCCGActcgcacaccggcgagaagcagTTCAGCTGCGacgtttgcgattacaaatgtcgtCTGCTCGTAATCTTGCAACACCACAAGCTGAAGCACACCGACGAAAAGCCGTTCATCTGCGAGTTTTGCGGTTATAAATTCCGTAGCCTCGCGATCCTCAACCAGCACAAGTTAAGGCACGCCGACGAGAATCCGTTCACTTGCGACCTCTGCGATTTCAAGTGTCACGACGCCGCGTTTCTCAACCAGCACAAGCTGGTGCACGTCGAGGAGACGTACAGCTGTGACCTCTGCGATTTCTCGAGCCAGCGGGTCGAAAGCTTCAACCTGCACAAGTTGAGGCACGCCGACGACAAGTCGTACATTTGCGGCCTGTGCTACTACAAGAGCCAGCACCACGGAAACTTCAAGAAGCACATGTTtaaacacaccggcgagaagccgttcgcttgcgacgtctgcgattataagtgccgagaCGCTACGAGTCTGAAGCGGCACAAACTGAAGCACACCGACgaaaaaccgttcagttgtgatttcTGTGATTATAAATGCAGACAGCTCGGGAGCCTGAAGCAGCATAGGCGTCAACGTCTCCCCTGCACCGACAAAGAAACGTTCGAGTGCGGGATATGCGACTCCAAATTAAAATCTCGCGCGAACTTGCGCAATCATCTCTtcatacacaccggcgagaagccgctggcttgtgatctctgcgattacaagtgcagGCACCTCGCAAACCTGAAACAGCACAAGCTGAAGcacgccgacgagaagccgttcagctgcgacCTATGCGATCATAAATCCCGACAGGTCGGTAATCTGAAGAAGCACATCTTGATACACgcgggcgagaagccgttcggttgcgaactctgcgattataagtgccgggACAGCGGCACTCTGAACCGGCACAAGGTGACGCACGCCGAAGAGAAATCGGTCAGCTGCGTTttctgcgattacaagtgtcgATGTGAACCCAAAACCGTGAACGGAAAAGCGGCGTTCCAATGCGGGGGTTGCAATGCTAAGTTTAAATCCCGCGCGAACCTGCACAGGCACACcttgatacacaccggcgagaagccgttcagttgcgacgtatgcgattacaagtgccgacaGCTCGTGCACCTGAATCAGCACAAGCTGAGGCACACGGACGAGAAGCCGTTGGGCTGCGACCTCTGCGATTTCAAGTGCCGAAATCCGTCGAGCTTGAAGGAGCACAGGCAGAAGCAcacgggcgagaagccgttcgcttgCGGCATTTGCGATCAAAAGTTCCGAAAGCACAGCACCTTGAAAAATCACTTGCTggtgcacaccggcgagaagccgttcagctgcgacGTGTGCGAGTACAAGTGCCGTCGCAGCGGCGAACTGAAGGTGCACATGTTGATGCACGCGGGCGAGAAGCCCTTCGCTTGCGGGCTCTGCGATTACAGCAGCCGAAGGTACGGCGATTTGAAAGCGCACATGTCGATACACGTCGACTTGAAGCCGTTCGCTTGTGAGCTTTGCGATTATAGGTGTCGGAACGCCGGGCGCCTGAAGAAACACAGGCTGAcgcacaccgatgagaagccgttcggttgcgatctctgcgattacagCAGCCGAAGGTGCGGCGATTTGAAAGCGCACATGTCGATACACACCGACTgcaagccgttcggttgtgagcTCTGCGATTATAGGTGCCGGAACGCCGGGTACCTGAAGAAACATAAGCTGAcgcacaccgatgagaagccgttcggttgcgatctctgcgattataagtgtcgaCGACTCGGACACCTGAAGCAGCACAAGCTGAGACACACTGACGAGAAGCCGCTGCTTTATTAA
Protein Sequence: MSDRKSDSHTGEKQFSCDVCDYKCRLLVILQHHKLKHTDEKPFICEFCGYKFRSLAILNQHKLRHADENPFTCDLCDFKCHDAAFLNQHKLVHVEETYSCDLCDFSSQRVESFNLHKLRHADDKSYICGLCYYKSQHHGNFKKHMFKHTGEKPFACDVCDYKCRDATSLKRHKLKHTDEKPFSCDFCDYKCRQLGSLKQHRRQRLPCTDKETFECGICDSKLKSRANLRNHLFIHTGEKPLACDLCDYKCRHLANLKQHKLKHADEKPFSCDLCDHKSRQVGNLKKHILIHAGEKPFGCELCDYKCRDSGTLNRHKVTHAEEKSVSCVFCDYKCRCEPKTVNGKAAFQCGGCNAKFKSRANLHRHTLIHTGEKPFSCDVCDYKCRQLVHLNQHKLRHTDEKPLGCDLCDFKCRNPSSLKEHRQKHTGEKPFACGICDQKFRKHSTLKNHLLVHTGEKPFSCDVCEYKCRRSGELKVHMLMHAGEKPFACGLCDYSSRRYGDLKAHMSIHVDLKPFACELCDYRCRNAGRLKKHRLTHTDEKPFGCDLCDYSSRRCGDLKAHMSIHTDCKPFGCELCDYRCRNAGYLKKHKLTHTDEKPFGCDLCDYKCRRLGHLKQHKLRHTDEKPLLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258886;
90% Identity: iTF_01258886;
80% Identity: iTF_01258886;