Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49208595-49211586[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00077 0.048 15.1 2.4 1 23 14 36 14 36 0.98

2 20 0.0027 0.17 13.3 3.3 3 23 44 64 42 64 0.98

3 20 0.00011 0.0072 17.7 0.4 1 23 70 92 70 92 0.97

4 20 0.015 0.92 11.0 2.7 1 23 98 120 98 120 0.98

5 20 0.22 14 7.4 2.5 3 23 128 148 126 148 0.98

6 20 0.0005 0.031 15.7 3.1 1 23 154 176 154 176 0.98

7 20 0.014 0.87 11.1 3.0 1 23 182 204 182 204 0.97

8 20 0.022 1.4 10.5 2.0 3 23 212 232 210 232 0.97

9 20 0.078 4.9 8.8 1.3 1 23 238 260 238 260 0.96

10 20 0.00068 0.042 15.2 3.4 1 23 266 288 266 288 0.98

11 20 0.0011 0.067 14.6 4.4 1 23 294 316 294 316 0.98

12 20 0.0087 0.54 11.8 0.3 1 21 322 342 322 343 0.96

13 20 0.00024 0.015 16.6 0.9 1 23 354 376 354 376 0.98

14 20 0.0022 0.14 13.7 0.6 3 23 384 404 382 404 0.97

15 20 0.0031 0.19 13.2 1.7 3 23 440 460 438 460 0.97

16 20 0.037 2.3 9.8 3.6 1 23 466 488 466 488 0.97

17 20 0.0014 0.089 14.2 3.2 1 21 494 514 494 515 0.95

18 20 0.11 7.1 8.2 5.5 1 23 522 544 522 544 0.97

19 20 0.0074 0.46 12.0 0.7 1 23 550 572 550 572 0.97

20 20 8.4e-05 0.0053 18.1 6.2 3 23 580 600 578 600 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00077	0.048	15.1	2.4	1	23	14	36	14	36	0.98
2	20	0.0027	0.17	13.3	3.3	3	23	44	64	42	64	0.98
3	20	0.00011	0.0072	17.7	0.4	1	23	70	92	70	92	0.97
4	20	0.015	0.92	11.0	2.7	1	23	98	120	98	120	0.98
5	20	0.22	14	7.4	2.5	3	23	128	148	126	148	0.98
6	20	0.0005	0.031	15.7	3.1	1	23	154	176	154	176	0.98
7	20	0.014	0.87	11.1	3.0	1	23	182	204	182	204	0.97
8	20	0.022	1.4	10.5	2.0	3	23	212	232	210	232	0.97
9	20	0.078	4.9	8.8	1.3	1	23	238	260	238	260	0.96
10	20	0.00068	0.042	15.2	3.4	1	23	266	288	266	288	0.98
11	20	0.0011	0.067	14.6	4.4	1	23	294	316	294	316	0.98
12	20	0.0087	0.54	11.8	0.3	1	21	322	342	322	343	0.96
13	20	0.00024	0.015	16.6	0.9	1	23	354	376	354	376	0.98
14	20	0.0022	0.14	13.7	0.6	3	23	384	404	382	404	0.97
15	20	0.0031	0.19	13.2	1.7	3	23	440	460	438	460	0.97
16	20	0.037	2.3	9.8	3.6	1	23	466	488	466	488	0.97
17	20	0.0014	0.089	14.2	3.2	1	21	494	514	494	515	0.95
18	20	0.11	7.1	8.2	5.5	1	23	522	544	522	544	0.97
19	20	0.0074	0.46	12.0	0.7	1	23	550	572	550	572	0.97
20	20	8.4e-05	0.0053	18.1	6.2	3	23	580	600	578	600	0.98

Sequence Information

Coding Sequence: ATGAAACTGCACGGGTTAATACACACCgccgagaagccgttcagttgcgacctttgcgattacaagtgccgacaGGCGGGAAGTTTGAAAGAGCACAAGCTAACACActccggcgagaagccgttcggctgcgatgtctgcgattataagtgcagATCTCAGGGAAAACTGAACAGACACAAAATGAAGCACAACGACTTGAGGCCGTTCGCCTGCGACATCTGCGATTTTAAATTCCGAGAGGCCGGGCAACTGAAAGAGCATAAGCAGACgcataccggcgagaagccgtttagttgtggtctttgcgattataagtgtcgaCTTGGTAAATACCTGAAGCGGCACATGTTAATACACaacggcgagaaaccgttcggttgtgatctctgcgattataaatgccaacGGGTGAGAAGCTTGAGAATTCACAAGTTGACGCACTCCGGCGAGAAGCCTTTCAGTTGCgatgtttgcgattataagtgccggcAATTGGTAAATATGAAGAATCACATGCTTAAGCAttccggcgagaaaccgttcagttgtgatctctgcgattacagATGTCGAAAATCCGGAGACATGAAGCAGCACAAGTTGATAcacgccgacgagaagccgttcggttgtgatctctgcgagtATAAGTGCCGGCAGGTCGGGACCCTGAGGAAACACATGGTGAAACAcgccgacgagaaaccgttcgcttGTGACATCTGCGAGTATAAGTGCCTGCAGGTGGGAAACTTGAAGCAGCACAGGCTGACGCACttcaacgagaagccgttcagctgcgatctttgcgattataagtgccgacaAGCTGGAAATATGAAGAGGCACAAGCTGACGCAttccgacgagaaaccgttcagttgtgatcgctgcgattacaaatgtcgaCAAGTCGAGAACTTGAGAAAACATCAACtgaaacacaccgacgagaagccgttcagatGTGGTATTTGCGATTACATATGCGAAAATTACAGGGATTTGGAAGTGCACGTGCGTCAACGTCAAACCAAAGCCGCGCACAAGAACGAATACCATTGCCGGATATGCGAAGCTAAATTTGCGACCCGCGCGTATTTGCGCAATCACATTTTggtacacaccggcgagaaaccgtacgGGTGCGAtttctgcgattataaatcgCGATACGCGGGGAACTTAAAAAGGCACGTGTtgaaacacaccgacgagaaaccgtacaGTTGTGACTTCTGCGATTTCAAGTGCCTACACCACGGAAGCTTCAGGCGGCACCAGCTGTATCACACCGGCgcgaagccgttcggttgtgacgtTTGCGGTTTCAGATGTCGGCAGCTCGGTAGTTTGAAGCGGCACGCGTtgaagcacaccgacgagaagccgttcagctgcgacGTCTGCGTTTTTACCTGTCGGGAGCTCACGAATTTAAAGCGGCACAAATTGAGGCACACCgccgagaagccgttcagctgcgacctttgcgatttcAAGTGTCGACGCCTCAGCAGCCTGAAACGGCACCAGCTGAGATACACCGGTGataagccgttcagttgcgacgCGTGCGATTTCAAGTGTCGGTTTCTCTTCAACCTGAAGCGGCACCGGTtgaaacacaccggcgagacGCCGTACGCttgcgatctctgcgattacaaggGCCGAGATGATACGAGCTTGAAGCGGCACAGGTTGAGGCACACCGGCGAGAGGCCGTTCGGCTGTGAGCGTTGCGGTTGTAGATTTCGTCGGCGCGCGCATTTGAAACGGCACATGtcgacgcacaccgacgagaaaccagTACGAATACCGATAGCTGGGAAGCTTGAAGAGGCACAGGTTTGA
Protein Sequence: MKLHGLIHTAEKPFSCDLCDYKCRQAGSLKEHKLTHSGEKPFGCDVCDYKCRSQGKLNRHKMKHNDLRPFACDICDFKFREAGQLKEHKQTHTGEKPFSCGLCDYKCRLGKYLKRHMLIHNGEKPFGCDLCDYKCQRVRSLRIHKLTHSGEKPFSCDVCDYKCRQLVNMKNHMLKHSGEKPFSCDLCDYRCRKSGDMKQHKLIHADEKPFGCDLCEYKCRQVGTLRKHMVKHADEKPFACDICEYKCLQVGNLKQHRLTHFNEKPFSCDLCDYKCRQAGNMKRHKLTHSDEKPFSCDRCDYKCRQVENLRKHQLKHTDEKPFRCGICDYICENYRDLEVHVRQRQTKAAHKNEYHCRICEAKFATRAYLRNHILVHTGEKPYGCDFCDYKSRYAGNLKRHVLKHTDEKPYSCDFCDFKCLHHGSFRRHQLYHTGAKPFGCDVCGFRCRQLGSLKRHALKHTDEKPFSCDVCVFTCRELTNLKRHKLRHTAEKPFSCDLCDFKCRRLSSLKRHQLRYTGDKPFSCDACDFKCRFLFNLKRHRLKHTGETPYACDLCDYKGRDDTSLKRHRLRHTGERPFGCERCGCRFRRRAHLKRHMSTHTDEKPVRIPIAGKLEEAQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258847;
90% Identity: iTF_01258847;
80% Identity: iTF_01258847;