Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069876.1:49541390-49542883[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00084 0.053 14.9 0.3 1 23 12 34 12 34 0.96

2 16 8.4e-05 0.0052 18.1 2.7 1 23 40 63 40 63 0.97

3 16 4.9e-05 0.0031 18.8 1.0 1 23 75 97 75 97 0.97

4 16 0.0038 0.24 12.9 0.4 1 23 102 124 102 124 0.96

5 16 5.7e-05 0.0035 18.6 2.4 1 23 134 156 134 156 0.98

6 16 0.012 0.77 11.3 2.1 3 23 163 183 161 183 0.96

7 16 0.0008 0.05 15.0 0.8 1 23 196 218 196 218 0.97

8 16 5.4e-05 0.0033 18.7 3.8 2 23 230 251 230 251 0.98

9 16 0.0016 0.097 14.1 5.4 1 23 257 279 257 279 0.96

10 16 0.00093 0.058 14.8 1.3 1 23 292 314 292 314 0.97

11 16 0.048 3 9.4 0.3 1 23 320 342 320 342 0.98

12 16 8e-06 0.0005 21.3 1.6 1 23 348 370 348 370 0.97

13 16 0.00071 0.044 15.2 0.3 1 23 376 398 376 398 0.98

14 16 0.00089 0.055 14.9 2.1 1 23 404 426 404 426 0.97

15 16 1.4e-06 8.6e-05 23.7 2.3 1 23 432 454 432 454 0.99

16 16 0.00053 0.033 15.6 2.9 1 23 460 483 460 483 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00084	0.053	14.9	0.3	1	23	12	34	12	34	0.96
2	16	8.4e-05	0.0052	18.1	2.7	1	23	40	63	40	63	0.97
3	16	4.9e-05	0.0031	18.8	1.0	1	23	75	97	75	97	0.97
4	16	0.0038	0.24	12.9	0.4	1	23	102	124	102	124	0.96
5	16	5.7e-05	0.0035	18.6	2.4	1	23	134	156	134	156	0.98
6	16	0.012	0.77	11.3	2.1	3	23	163	183	161	183	0.96
7	16	0.0008	0.05	15.0	0.8	1	23	196	218	196	218	0.97
8	16	5.4e-05	0.0033	18.7	3.8	2	23	230	251	230	251	0.98
9	16	0.0016	0.097	14.1	5.4	1	23	257	279	257	279	0.96
10	16	0.00093	0.058	14.8	1.3	1	23	292	314	292	314	0.97
11	16	0.048	3	9.4	0.3	1	23	320	342	320	342	0.98
12	16	8e-06	0.0005	21.3	1.6	1	23	348	370	348	370	0.97
13	16	0.00071	0.044	15.2	0.3	1	23	376	398	376	398	0.98
14	16	0.00089	0.055	14.9	2.1	1	23	404	426	404	426	0.97
15	16	1.4e-06	8.6e-05	23.7	2.3	1	23	432	454	432	454	0.99
16	16	0.00053	0.033	15.6	2.9	1	23	460	483	460	483	0.96

Sequence Information

Coding Sequence: ATGCGAATCGGCAAGGCGCCCCTCACTCGGATGTTCGCGTGCGATCGCTGCGATTACGCGACGAACCGCGCCGACACTCTCAAGAAGCACGCCCTgagacacaccggcgagaaaccgcaCGAATGCAAGCTGTGCGACTACAAGTGCATCGTGTCCGCGAACCTGGAGCGCCACATGAGGGTGCGCCACCTCAAGTTGAAGGGCGAAGGGGGCGAATTCGAATTCGCCTGCGAGATCTGCGAGTTTAAGACGACGCAAGCCGATTACCTGCGGAAGCACATGAAGAGACACGGCGATCAGCAGTTCGCCTGCGGACTCTGCGATTACAAGAGCTCCGTCTCCATCAACTTCACCAGGCACATGAGTTTGCATCGCGCCAAAGAGAAACCCAAATGCGAGTTCTCCTGCAAGGTCTGCGAGTTTAAGACGACGCAAGCCGATTACCTGAGGAGACACATGAAGAGGCATGGTAACAAACAGCTGGCTTGCGAACAGTGCGATTTCAAGTGCGTCGCCTCCGAAACCTTCAAGCGGCACATGATGAAGCACTCGGCGAACGAAACGGGGGAGGAATTCGAGCTTGAGTTCGCCTGTGACGTCTGCAGCTTTAAAACGAATCAAGCCGCGTACCTGAGCAGGCACATGAAGCGACACAACAGCGATAAGCCCGACAATTGCGTGTGGCGCAAGTGCGATCACTGCGATTATAAAACGAACCGCAGCGACAGTCTTAAGAATCACATGCTCAcccacaccggcgagaagccgcaCGCCTGCAAGTTGTGCAGTTATAGTTGCATCACGTCCGGGAAACTCAAGCGACACTTGAAGACGCACATGGCGAAGGAGAAGGTCCAGGAGGCCGACAAGAAATTCATGTGCGACGTCTGCAGTTTTAAAACGACGACCGCCAAGTACCTGAGGAATCACATGACGGTGCACAGCGGCGAGAAGCCCTTCCAGTGCGATCGCTGCGGCGATAAGTTCGCCTCGAATATAATCCTGAAAATGCACATAATGCGACACACCGGGGAGAAACCGTACGAGTGCAACATCTGCGGCTACAAGTGCAGCCAGAACGGAACGCTGAAGCGCCACCTTATCCTACACACCGGCATAAAAACCTTCCAATGCAGCAAGTGCGATTACAGGGCCGCCGTCAAGGGCACGCTCGCCAAGCACATGGCCAAGCATTCCACGGAGAAACCGTTCGCGTGCAACATCTGCAGCCACAAGACGAAAACGGCGAAGCTTCTGAAAAGCCACATGATATCGCACACCGGCGAGCAGCAGTATAAATGCAACGTCTGCGACAAGCGATTCTCGCGTTACAAGGGCATGAAGAAACACATGTTGATACACACGGGCGAGAAGCCGTACGCGTGTAACTTGTGCGATTACAGGTCCACCCAGAAGTCGAACGTTAAAATACACATGAAGCACAGACACAAGGAATTCAACGCGGTTACCGCAAGTAAAATCGAAGCAACTTGA
Protein Sequence: MRIGKAPLTRMFACDRCDYATNRADTLKKHALRHTGEKPHECKLCDYKCIVSANLERHMRVRHLKLKGEGGEFEFACEICEFKTTQADYLRKHMKRHGDQQFACGLCDYKSSVSINFTRHMSLHRAKEKPKCEFSCKVCEFKTTQADYLRRHMKRHGNKQLACEQCDFKCVASETFKRHMMKHSANETGEEFELEFACDVCSFKTNQAAYLSRHMKRHNSDKPDNCVWRKCDHCDYKTNRSDSLKNHMLTHTGEKPHACKLCSYSCITSGKLKRHLKTHMAKEKVQEADKKFMCDVCSFKTTTAKYLRNHMTVHSGEKPFQCDRCGDKFASNIILKMHIMRHTGEKPYECNICGYKCSQNGTLKRHLILHTGIKTFQCSKCDYRAAVKGTLAKHMAKHSTEKPFACNICSHKTKTAKLLKSHMISHTGEQQYKCNVCDKRFSRYKGMKKHMLIHTGEKPYACNLCDYRSTQKSNVKIHMKHRHKEFNAVTASKIEAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258855;
90% Identity: iTF_01258855;
80% Identity: iTF_01258855;