Basic Information

Insect: Prosopocoilus inquinatus
Gene Symbol: -
Assembly: GCA_036172665.1
Location: CM069870.1:524356-530729[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.2e-06 0.00014 23.1 0.7 1 23 182 204 182 204 0.98

2 12 0.00014 0.0085 17.4 0.9 2 23 209 230 208 230 0.97

3 12 1.2e-07 7.6e-06 27.0 2.4 1 23 236 258 236 258 0.96

4 12 2.8e-05 0.0018 19.6 2.1 3 23 266 286 264 286 0.96

5 12 0.00012 0.0075 17.6 0.0 3 23 294 314 292 314 0.95

6 12 1.3e-05 0.00083 20.6 3.1 1 23 320 342 320 342 0.99

7 12 4.2e-07 2.6e-05 25.3 0.1 1 23 348 370 348 370 0.99

8 12 9.2e-05 0.0058 18.0 0.5 1 23 376 398 376 398 0.97

9 12 5.5e-06 0.00034 21.8 0.2 1 23 404 426 404 426 0.99

10 12 8.1e-06 0.0005 21.3 3.4 1 23 432 454 432 454 0.99

11 12 0.00057 0.036 15.5 3.7 1 23 460 482 460 482 0.98

12 12 1.3e-05 0.00081 20.7 2.5 1 23 488 510 488 511 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.2e-06	0.00014	23.1	0.7	1	23	182	204	182	204	0.98
2	12	0.00014	0.0085	17.4	0.9	2	23	209	230	208	230	0.97
3	12	1.2e-07	7.6e-06	27.0	2.4	1	23	236	258	236	258	0.96
4	12	2.8e-05	0.0018	19.6	2.1	3	23	266	286	264	286	0.96
5	12	0.00012	0.0075	17.6	0.0	3	23	294	314	292	314	0.95
6	12	1.3e-05	0.00083	20.6	3.1	1	23	320	342	320	342	0.99
7	12	4.2e-07	2.6e-05	25.3	0.1	1	23	348	370	348	370	0.99
8	12	9.2e-05	0.0058	18.0	0.5	1	23	376	398	376	398	0.97
9	12	5.5e-06	0.00034	21.8	0.2	1	23	404	426	404	426	0.99
10	12	8.1e-06	0.0005	21.3	3.4	1	23	432	454	432	454	0.99
11	12	0.00057	0.036	15.5	3.7	1	23	460	482	460	482	0.98
12	12	1.3e-05	0.00081	20.7	2.5	1	23	488	510	488	511	0.96

Sequence Information

Coding Sequence: ATGGAAGAATTTAACATAACTGTAATTACAAATATAAATCGACTGTGTAGGACTTGCCTATCAGAGAGAAATGAGCAAGACTTGCGACTAATATTTGAAGCAGCAGTCGACACTATGCTCAAAGGATTAGCAGATATTACTGCAAGCAAAGACGACGGCTTACCAAGTTACATGTGCAGGGACTGCGTGCTTCAATTAGGTTTAGCGTTTACATTTAAAGAGCAGTGCCAGAAATCCGACGCACAGTTACGAGAATTACTATTACCATCTACGCAGACACAGATAGACTCTAAGTCGTTAGTAATCAATTTCAACATTGCAGAGCAATGCTCGAGTGCTGAACTTGATCACAAAACACAATTAAATCCAGTTAAAGCTCAACTAATTAACATGGATTCGCAAAACACCAGATACAAATTAGAAAGTAGTATCGAAATTGAGAGCAAAATTGAAAAGCATGACACAGATGACGATTGTAACATTCCGGAAACTGAGGACATGAATTTTGGTGAAAAGAGTCAGTCGGAAGCAAGAGTTGAGAAATATGAATGCACTGAGTGTGACAGGTCTTTTCGCTTAGCCAGCAGTCTCAGAACGCATTTGATAAAACATGGGAAGAAAATTCGGTGTGAGGTTTGCGGAAAGGAATTTAATCTTGTCAAACATTTGAATTCTCATTTAAAAGTTCACGCAGATTACAAACCTCACTTTTGTAAGATTTGTGATAAGTCGTTCAACACAGCGGGAAGCCTGACAAAGCACATGAGGATTCACGGAGGAGAAAAGAAACATCTGTGTATGCAGTGCGGTAAAAGGTTTTATGAGCCGGGTCATTTAGTTGTGCACATGCGAACACACACCGGTGAAAAACCGATAATTTGCAGTATTTGTGGGAAAGGTTTCGCTGATCCGCACGGTTTGGTCGCTCACAATAAGATTCACTCTGGTGAAAGAAATTACGAATGTAAAACTTGTggaaaacgatttgcacattcgtttgttttaacggCCCACAAAAGGACTCACACAGGAGAAAAACCGTACGTTTGTACAATTTGCGGTGCTGCGTTTGCAACATCTTCGTACTTAACTATACATACCAGGACACATACCCAAGAGCGGCCGTATAAATGCGATACATGTCCAAAAGCCTTTGTAAGTAAATGTGCACTTGTTGCCCACAATATGATTCATACAGGGGAAAAGAAATTCCAGTGCTTTGTGTGTGGAAAACGAACAGGACGTGCGGCCGATTTAACTATACACATGCGTTCTCATACAGGTGAAAAACCATATAGTTGTGATCAGTGTCCAAAAAAATATCACACGTCCAGTAATCTCTCGGCGCACAGACGAACCCATCTTGGCATTCGCGATCATGTTTGTTCCATCTGTGGCAAGGCCTTCGGTGATTCTAGAACGCTCAAGTGCCACACTAGAACACACACAGGCGAGAAGCCGTACGTATGTCACATCTGCGGAAGCAGGTATACCCAGTCTGGTCAGTTAGCTGCACACCGAAAAACTCATCATCCCCCTAGCCAACAAATACAAGTCGAATCAGTTGCGTAA
Protein Sequence: MEEFNITVITNINRLCRTCLSERNEQDLRLIFEAAVDTMLKGLADITASKDDGLPSYMCRDCVLQLGLAFTFKEQCQKSDAQLRELLLPSTQTQIDSKSLVINFNIAEQCSSAELDHKTQLNPVKAQLINMDSQNTRYKLESSIEIESKIEKHDTDDDCNIPETEDMNFGEKSQSEARVEKYECTECDRSFRLASSLRTHLIKHGKKIRCEVCGKEFNLVKHLNSHLKVHADYKPHFCKICDKSFNTAGSLTKHMRIHGGEKKHLCMQCGKRFYEPGHLVVHMRTHTGEKPIICSICGKGFADPHGLVAHNKIHSGERNYECKTCGKRFAHSFVLTAHKRTHTGEKPYVCTICGAAFATSSYLTIHTRTHTQERPYKCDTCPKAFVSKCALVAHNMIHTGEKKFQCFVCGKRTGRAADLTIHMRSHTGEKPYSCDQCPKKYHTSSNLSAHRRTHLGIRDHVCSICGKAFGDSRTLKCHTRTHTGEKPYVCHICGSRYTQSGQLAAHRKTHHPPSQQIQVESVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465197; iTF_00466625;
90% Identity: iTF_00466625; iTF_00465197;
80% Identity: -